Actinacidiphila reveromycinica: RVR_6904
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Entry
RVR_6904 CDS
T10579
Name
(GenBank) putative 2-oxoglutarate dehydrogenase
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
arev Actinacidiphila reveromycinica
Pathway
arev00020
Citrate cycle (TCA cycle)
arev00630
Glyoxylate and dicarboxylate metabolism
arev00785
Lipoic acid metabolism
arev01100
Metabolic pathways
arev01110
Biosynthesis of secondary metabolites
arev01120
Microbial metabolism in diverse environments
arev01200
Carbon metabolism
arev01210
2-Oxocarboxylic acid metabolism
Module
arev_M00009
Citrate cycle (TCA cycle, Krebs cycle)
arev_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
arev00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RVR_6904
00630 Glyoxylate and dicarboxylate metabolism
RVR_6904
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RVR_6904
Enzymes [BR:
arev01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
RVR_6904
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
RVR_6904
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
RVR_6904
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
RVR_6904
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
BBB00027
UniProt:
A0A7U3UWM4
LinkDB
All DBs
Position
complement(5765917..5769771)
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AA seq
1284 aa
AA seq
DB search
MSPQSPNSSSVSTDHQAQGEGPAAGFGPNEWLVDEIYQQYLQDPNSVDRAWWDFFADYKP
DGSAAPAAPAGQGGASGAAARASAGVPGSTPPSAPAGPQAAAAPAPAPAAPAAPAQPAPA
AAPAPAAQAPAPAAKPAAQAPAPAAKPAAAPAAKPAAAAAAPAETEYVPLRGPAAAVAKN
MNASLELPTATSVRAIPVKLLFDNRIVINNHLKRARGGKVSFTHLIGYAMVQALKTMPSM
NHSFALKDGKPTLVKPEHVNLGLAIDLVKPNGDRQLVVAAIKKAETLNFFEFWQAYEDIV
RRARSGKLTMDDFSGVTASLTNPGGLGTVHSVPRLMPGQSVILGVGSMDYPAEFQGTSQD
TLNKLGISKVMTLTSTYDHRVIQGAASGEFLRIMSQLLLGENDFFDDIFAALRIPYEPVR
WRTDIDTAHDDDVTKAARVFELIHSYRVRGHVMADTDPLEYRQRKHPDLDVLEHGLTLWD
LEREFAVGGFAGKSLMKLRDILGVLRDSYCRTVGVEYMHIQDPKQRKWIQDRIERPHAKP
EREEQLRVLRRLNAAEAFETFLQTKYVGQKRFSLEGGESVIPLLDAVLDAAAESRLDEVI
IGMAHRGRLNVLANIVGKSYAQIFREFEGNLDPKSMHGSGDVKYHLGAEGTFTGLDGEQI
NVSLAANPSHLETVDPVIEGIARAKQDVINKAGTDFTVLPVALHGDAAFAGQGVVAETLN
MSQLRGYRTGGTVHVVINNQVGFTAAPESARSSMYSTDVARMIEAPIFHVNGDDPEAVVR
VARLAFEFRQAFNKDVVIDLICYRRRGHNESDNPAFTQPLMYDLIDKKRSVRKLYTESLI
GRGDITLEEAEQALQDYQGQLEKVFTEVREAVAAPAESPSQDNQPEFPVAVPTAVSTEVV
KRIAESQVNIPDHVTVHPRLLPQLQRRAAMVEDGTIDWGMGETLAIGSLLLEGTPVRLAG
QDSRRGTFGQRHAVLIDRVTGEDYTPLLYLSEDQARYNVYDSLLSEYAAMGFEYGYSLAR
PDALVMWEAQFGDFANGASSIIDEYISAAEQKWGQTSGVTLLLPHGYEGQGPDHSSARIE
RYLQLCAQNNMTVAFPTTPANYFHLLRWQVHNPHHKPLIVFTPKSMLRLKAAASKAEDFT
TGQFQPVIGDTTVQPEAVRKVVFCTGKVYYDLIAEREKRGAGDVAIIRIERLYPLPGAEI
QQALAPFTKAQKFVWAQEEPANQGAWPFIALNLIDHLDLVLGAAPDNADRLRRVSRPSSS
SPAVGSAKRHQEQQQNLVNEVFEI
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgccacagtcccccaatagctccagtgtctccaccgaccaccaagcgcagggcgag
ggccccgcagcgggcttcggcccgaacgagtggctcgtggacgagatctaccagcagtac
ctccaggacccgaactcggtagaccgagcctggtgggacttcttcgccgactacaagccg
gacggctccgccgctccggccgcccccgcggggcagggcggtgcctcgggcgccgccgcc
cgcgccagcgcgggcgtgcccggctccaccccgccctccgcccccgccggcccgcaggcc
gccgcggctcccgcgccggctccggccgcgcccgccgccccggcccagccggctccggcg
gccgctccggcaccggccgcccaggctcccgccccggccgcgaagccggccgcgcaggct
cccgcgcccgcggccaagcccgccgccgccccggccgccaagcccgccgctgccgcggcc
gcgccggccgagacggagtacgtgccgctgcgcggcccggccgccgccgtggcgaagaac
atgaacgcctccctggagctgcccaccgccacctcggtgcgggcgatcccggtgaagctg
ctcttcgacaaccgcatcgtgatcaacaaccacctcaagcgggcccggggcgggaaggtc
tccttcacccacctcatcggctacgccatggtgcaggcgctgaagacgatgccgtcgatg
aaccactccttcgcgctgaaggacggcaagccgacgctggtcaagcccgagcacgtgaac
ctgggcctggccatcgacctggtgaagccgaacggcgaccgccagctcgtggtcgcggcc
atcaagaaggccgagacgctgaacttcttcgagttctggcaggcgtacgaggacatcgtc
cgccgggcccgctcgggcaagctcaccatggacgacttctccggtgtcaccgcctcgctg
accaaccccggcgggctgggcaccgtgcactcggtgccgcgcctgatgcccgggcagtcg
gtgatcctcggcgtcggctccatggactaccccgccgagttccagggcacctcccaggac
accctgaacaagctgggcatctccaaggtcatgaccctgaccagcacctacgaccaccgg
gtcatccagggtgccgcctcaggcgagttcctgcggatcatgagccagctcctgctgggc
gagaacgacttcttcgacgacatcttcgccgcgctgcgcatcccgtacgagccggtgcgg
tggcgcaccgacatcgacaccgcgcacgacgacgacgtcaccaaggccgcgcgggtcttc
gagctgatccactcctaccgggtgcgcggccacgtgatggccgacaccgacccgctggag
taccgccagcgcaagcacccggacctcgacgtcctggagcacgggctcaccctgtgggac
ctggagcgggagttcgcggtcggcggcttcgccggcaagtccctgatgaagctgcgcgac
atcctcggggtgctgcgcgactcgtactgccgcaccgtcggcgtcgagtacatgcacatc
caggaccccaagcagcgcaagtggatccaggaccgcatcgagcgcccgcacgccaagccg
gagcgcgaggagcagttgcgcgtcctgcgccggctgaacgccgccgaggcgttcgagacg
ttcctccagaccaaatacgtcggccagaagcggttctcgctggagggcggcgagtcggtc
atcccgctgctggacgcggtgctggacgcggcggccgagtcccggctggacgaggtcatc
atcggcatggcccaccgcggccggctgaacgtgctggcgaacatcgtcggcaagtcgtac
gcgcagatcttccgcgagttcgagggcaacctcgacccgaagtcgatgcacggctccggc
gacgtgaagtaccacctgggcgccgagggcaccttcaccggcctggacggcgagcagatc
aacgtgtcgctggccgcgaacccctcgcacctggagaccgtggacccggtcatcgagggc
atcgcccgcgccaagcaggacgtcatcaacaaggccggcaccgacttcacggtgctgccc
gtcgcgctgcacggcgacgcggccttcgccggccagggcgtggtggccgagacgctgaac
atgtcgcaactgcgcggctaccgcaccggcggcaccgtgcacgtggtgatcaacaaccag
gtcggcttcaccgccgccccggagtccgcgcgctcgtcgatgtacagcaccgacgtggcc
cggatgatcgaggcgccgatcttccacgtgaacggcgacgacccggaggccgtggtccgc
gtggcgcggctggccttcgagttccggcaggcgttcaacaaggacgtcgtgatcgacctg
atctgctaccggcgccgcggccacaacgagtccgacaacccggccttcacccagccgctg
atgtacgacctgatcgacaagaagcgctcggtgcgcaagctctacaccgagtcgctgatc
ggccgcggcgacatcaccctggaagaggccgagcaggcgctccaggactaccagggccag
ctcgagaaggtcttcaccgaggtgcgcgaggccgtcgccgccccggcggagagcccgagc
caggacaaccagcccgagttcccggtcgcggtgccgaccgcggtctccaccgaggtggtc
aagcggatcgccgagtcccaggtgaacatccccgaccacgtcacggtgcacccgcggctg
ctgccgcagctccagcgccgggcggccatggtcgaggacggcaccatcgactggggcatg
ggcgagacgctggcgatcggctcgctgctgctggagggcaccccggtccggctggccggc
caggactcccggcgcggcaccttcggccagcggcacgcggtgctcatcgaccgggtgacc
ggcgaggactacaccccgctgctgtacctgtccgaggaccaggcccgctacaacgtctac
gactcgctgctcagcgagtacgcggcgatgggcttcgagtacggctactcgctggcccgg
ccggacgcgctggtgatgtgggaggcccagttcggcgacttcgccaacggcgcctcctcg
atcatcgacgagtacatctcggccgccgagcagaagtggggccagacctccggcgtcacc
ctgctgctgccgcacggctacgagggccagggcccggaccactcctcggcccggatcgag
cgctacctccaactgtgcgcgcagaacaacatgacggtcgcgttcccgaccaccccggcg
aactacttccacctgctgcgctggcaggtgcacaacccgcaccacaagccgctgatcgtc
ttcaccccgaagtcgatgctgcggctgaaggcggcggcgtcgaaggccgaggacttcacc
accggccagttccagccggtgatcggcgacaccacggtgcagcccgaggcggtccgcaag
gtcgtcttctgcaccggcaaggtctactacgacctgatcgccgagcgggagaagcgcggc
gcgggcgacgtcgccatcatccggatcgagcggctctacccgctgccgggcgcggagatc
cagcaggcgctggcgccgttcaccaaggcgcagaagttcgtctgggcccaggaggagccg
gccaaccagggcgcgtggccgttcatcgcgctgaacctgatcgaccacctcgacctggtg
ctgggcgccgccccggacaacgcggaccggctgcgccgggtctcgcgtccgtcctcgtcg
tcgccggccgtgggttcggccaagcggcaccaggagcagcagcagaacctggtgaacgag
gtcttcgagatctga
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