Actinacidiphila reveromycinica: RVR_7408 Help Entry RVR_7408          CDS       T10579                                  Name (GenBank) putative DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism arev  Actinacidiphila reveromycinica Pathway arev03030   DNA replication arev03410   Base excision repair arev03420   Nucleotide excision repair arev03430   Mismatch repair Brite KEGG Orthology (KO) [BR:arev00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     RVR_7408    03410 Base excision repair     RVR_7408    03420 Nucleotide excision repair     RVR_7408    03430 Mismatch repair     RVR_7408  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:arev03032]     RVR_7408    03400 DNA repair and recombination proteins [BR:arev03400]     RVR_7408 Enzymes [BR:arev01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      RVR_7408 DNA replication proteins [BR:arev03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      RVR_7408 DNA repair and recombination proteins [BR:arev03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      RVR_7408    NER (nucleotide excision repair)     GGR (global genome repair) factors      RVR_7408    MMR (mismatch excision repair)     DNA ligase      RVR_7408   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       RVR_7408 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 Nlig-Ia HHH Motif Other DBs NCBI-ProteinID:  BBB00376 UniProt:  A0A7U3UX48 LinkDB All DBs Position 6186994..6189333 Genome browser AA seq 779 aa AA seqDB search MAAEQEAGRAEIPAEAREEHARLAEQVEEHRFRYYVNDAPVVSDAEFDRLLRRLEAVEER HPSLRTPDSPTQKVAGAYETEFTSVQHRERLLSLDNAFSDEELATWADRVAAELGPPDNA RSPYHFLCELKVDGLAVNLTYEGGRLTRAATRGDGRTGEDITPNVRTISDIPDRLAGDSV PDLVEIRGEVYFPGDKFEELNARLVEAGDKPFANPRNAAAGSLRQKDPRVTATRPLRMVV HGIGAREGFDVDCQSHAYELLRAWGLPTARHNKVAGSLAAVREFIAYYGEHRHDVEHEID GVVVKVDEVPLQGRLGSTSRAPRWAIAWKYAPEEVNTKLLDIRVGVGRTGRVTPYAVVEP VTVAGSEVEFATLHNQEVVKKKGVLIGDTVVLRKAGDVIPEILGPVADLRDGGEREFVMP AECPECGTALQPMKEGDIDLRCPNARRCPAQLRERIFYLAGRRCLDIEALGYVAATALTQ PLAPDQPPMADEGDLFALDIERLLPIRSYVLDQDTGLPKRDPETGEEKVVTFFANQKGEP KKNALAMLENIAAAKERPLARVITGLSIRHVGPVAAEALAREFRDLDRIKDAEEAELAAV DGVGPTIAASLKQWFAVDWHLEIIEKWRAAGVTFTEEGSDEGPRPLEGLTVVVTGTLAGH TRDGAKEQLSALGAKVTGSVSKKTHFVVVGDNPGSKYDKAVQLKVPILDEAGFGVLLDQG ADAARAVTVNPPEPEPAAEQAAETAGEPGQEAEPEAAPEQEADPADPAGPAAGPDGTSD NT seq 2340 nt NT seq  +upstreamnt  +downstreamnt gtggcagccgagcaggaggccggccgggcggagatccccgccgaggcccgcgaggagcac gcgcgcctggccgagcaggtcgaggagcaccgcttccgctactacgtgaacgacgcgccg gtggtcagtgacgccgagttcgaccggctgctgcgccggctggaggcggtcgaggagcgg cacccctcgctgcgcaccccggactcgcccacccagaaggtcgcgggggcctacgagacg gagttcacctccgtccagcaccgcgagcgcctgctctcgctggacaacgccttcagcgac gaggaactggcgacctgggccgaccgggtcgccgccgaactcggcccgcccgacaacgcc cgcagcccgtaccacttcctgtgcgaactgaaggtcgacggcctcgcggtcaacctcacc tacgaaggcggccggctgacccgcgccgccacccgcggcgacggccgcaccggcgaggac atcacgccgaacgtccgcaccatctccgacatccccgaccggctggccggcgacagcgtg cccgacctggtcgagatccgcggcgaggtctacttccccggcgacaagttcgaggagctg aacgcgcggctggtcgaggccggcgacaagcccttcgccaacccgcggaacgccgcggcc ggctcgctgcgccagaaggacccccgggtcaccgccacccgcccgctgcgcatggtggtg cacggtatcggcgcccgcgagggcttcgacgtcgactgccagtcgcacgcctacgaactg ctgcgcgcgtggggcctgcccaccgcccgccacaacaaggtggccggctcgctcgccgcc gtccgcgagttcatcgcctactacggcgagcaccgccacgacgtcgagcacgagatcgac ggcgtcgtggtcaaggtcgacgaggtcccgctccagggccggctcggttccacctcgcgc gccccgcgctgggcgatcgcctggaagtacgccccggaggaggtcaacaccaagctgctg gacatccgggtcggcgtcggccgcaccggccgggtcacgccgtacgcggtggtcgaaccg gtcaccgtggccggctccgaggtcgagttcgccaccctgcacaaccaggaggtggtgaag aagaagggcgtgctgatcggcgacaccgtggtgctgcgcaaggccggggacgtcatcccg gagatcctgggcccggtggccgacctgcgggacggcggcgagcgggagttcgtgatgccc gccgagtgccccgagtgcggcaccgccctccagccgatgaaggagggcgacatcgatctg cgctgccccaacgcgcggcgctgccccgcccagttgcgcgagcggatcttctacctcgcc ggccgccgctgcctggacatcgaagccctcggatacgtcgcggcgaccgcgctgacccag ccgctcgcccccgaccagccgccgatggccgacgagggcgacctcttcgccctcgacatc gagcggctgctgccgatccggtcgtacgtcctggaccaggacaccggcctgcccaagcgc gacccggagaccggcgaggagaaggtggtcaccttcttcgccaaccagaagggcgagccg aagaagaacgcgctggccatgctggagaacatcgcggcggccaaggagcgcccgctggcc cgggtgatcacggggctgtccatccggcacgtcggcccggtggccgccgaggcgctcgcc cgcgagttccgcgacctggaccggatcaaggacgccgaggaggccgagctggccgcggtc gacggggtcgggccgaccatcgccgcctcgctcaagcagtggttcgcggtggactggcac ctggagatcatcgagaagtggcgcgccgccggtgtgaccttcaccgaggagggctccgac gaggggccgcggcccctggaggggctgaccgtggtggtgaccggcacgctcgccgggcac acccgcgacggcgcgaaggagcagctgagcgccctgggcgcgaaggtcaccggttcggtc tccaagaagacccacttcgtggtggtcggcgacaaccccggctcgaagtacgacaaggcg gtccagctcaaggtcccgatcctcgacgaggcgggcttcggagtgctcctcgaccagggc gcggacgccgcccgtgcggtgacggtgaacccgccggagccggagccggcggcagagcag gcagcggagacggcgggggagccggggcaggaggcggagccggaagcagccccggagcag gaggcggacccggcggacccggccggcccggcggccggacccgacggcacatcagactga

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