Anaerostipes rhamnosivorans: AR1Y2_0945
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Entry
AR1Y2_0945 CDS
T05962
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
arf
Anaerostipes rhamnosivorans
Pathway
arf03030
DNA replication
arf03410
Base excision repair
arf03420
Nucleotide excision repair
arf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AR1Y2_0945
03410 Base excision repair
AR1Y2_0945
03420 Nucleotide excision repair
AR1Y2_0945
03430 Mismatch repair
AR1Y2_0945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arf03032
]
AR1Y2_0945
03400 DNA repair and recombination proteins [BR:
arf03400
]
AR1Y2_0945
Enzymes [BR:
arf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AR1Y2_0945
DNA replication proteins [BR:
arf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AR1Y2_0945
DNA repair and recombination proteins [BR:
arf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AR1Y2_0945
NER (nucleotide excision repair)
GGR (global genome repair) factors
AR1Y2_0945
MMR (mismatch excision repair)
DNA ligase
AR1Y2_0945
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AR1Y2_0945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
PTCB-BRCT
DNA_ligase_ZBD
BRCT_2
Nlig-Ia
Rsa3
Lar_restr_allev
zf-tcix
Motif
Other DBs
NCBI-ProteinID:
QCP34399
UniProt:
A0A4P8IGZ1
LinkDB
All DBs
Position
965083..967038
Genome browser
AA seq
651 aa
AA seq
DB search
MKDKFDRMKELIQILSEASKAYYQENKEIMSNFEYDKLYDELLELEKETDTVLADSPSVH
VGYELLTSLEKEAHTSPMLSLDKTKEVGELAEWLGDQKGLLSWKLDGLTIVLTYQDGVLS
KAVTRGNGEVGEVVTNNARVFVNLPKKIAYKGNLVIRGEAVIHYSDFKRMNEELEDLDSR
YKNPRNLCSGSVRQLNNEVTAKRNVRFYGFSVADVPDVDFHNSVEEKFIWAKGLGFDMVD
YVTVTSDTVASEVESFSKKIESNDQPSDGLVLIYDDIAYGRSLGTTAKFPRDSIAFKWAD
EIAETTLEEIEWSPSRTGLINPVAIFDPVELEGSTVSRASLHNISVMEELELGVGDQISV
YKANMIIPQLAQNHTRSGNAAIPDTCPACGGKTEIEEENGIRTLVCPNQFCSAKKIKLFS
HFVSRDAMNVDGLSEASLHKLMEKGLLTELYDLYTLKEHKEEIVEMEGFGEKSFSNLVDA
IEQSKKATLPKFLYGLGIANVGLSNAKLICRHFGDDLDAIRTAQAEDFTVIDGIGPIIGE
SVSQYFLLENNRQTVDGLLEYVEIQKQEEPDTEKKLEGKTFVITGSLNHYENRKQLQEQI
EALGGKATGSVTKKTDYLINNDRNSSSSKNKKARELEIPILTEEEFMDMIK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagataagtttgaccgaatgaaagaactgatccagatcctgagtgaggcgtcgaaa
gcctactatcaggaaaataaagagatcatgagtaattttgaatatgacaagctctacgat
gagcttttggagctggagaaagaaacagatacggtgctggcggacagtccctctgtccat
gtaggatatgagcttttgacgtccctggaaaaggaggcccacacatctccaatgctttcc
ctggataagacaaaggaagtgggagaactggcagaatggctgggagatcaaaaggggctg
ctttcgtggaagctggatgggcttacaatcgttctcacctaccaggatggagtcctgtca
aaggccgttacccggggaaacggggaagtcggcgaggtggtgaccaacaatgccagggta
tttgtgaatctgccgaaaaagattgcctacaaaggaaatctggtgatacgcggtgaggca
gtgatccactattctgactttaaaagaatgaatgaagaattggaagatctggacagtaga
tataagaatccaaggaatctatgcagcggttctgtaagacagctgaataatgaggtgaca
gctaagcggaatgtccgtttttatggtttttccgtagctgatgttccagatgtggatttc
cataattctgtggaagaaaagtttatctgggcaaagggccttggttttgacatggtggat
tatgtgactgtcacatcggatacagtggcttctgaggtagagtctttctctaagaagatc
gagagcaatgaccagccgtcagacggacttgtgctgatctatgatgatattgcttacggc
agaagcctgggaaccactgctaaatttccaagggattccattgcctttaaatgggccgac
gaaatcgcggagaccacattggaggagatcgaatggagtccttccagaacagggcttatc
aatccggtggccatctttgatcctgtggaactggagggttccacggtcagccgtgccagc
ctccacaatatcagtgtcatggaggaattggaactgggagtcggagaccagatttcagtc
tacaaggctaatatgatcatcccacagctggcccaaaaccataccagaagcggcaacgcc
gctatccccgatacctgtcctgcgtgcggcgggaagacagagattgaggaagagaacggc
atccggacactagtctgtcccaatcaattctgtagtgccaaaaagatcaagcttttttcg
cattttgtgtcgagagacgcgatgaacgtggacgggttgtctgaagcttctttgcacaag
ctgatggaaaaggggcttttaacagagctttatgatttgtacacactgaaagaacacaaa
gaagagatcgtggagatggaaggattcggagagaagtcattttccaaccttgtggatgcc
atagaacagtccaagaaagccactcttcccaagtttctttatgggcttgggattgccaac
gtgggtctttccaacgcaaaacttatctgcaggcattttggggatgacctggatgccatc
cggactgcgcaggcggaagattttacggtgatcgacggcatcggaccgatcatcggtgag
tccgtgagccagtatttccttctggaaaataacagacagactgtggacggcctgcttgag
tatgtggagatccagaagcaggaggagccggacacggagaaaaaattggaaggtaagacc
tttgtgatcaccgggtccctgaatcattatgaaaaccggaagcagctgcaggagcagatc
gaagcactcggaggaaaagccacaggttctgtgacaaaaaagacggactatctgatcaac
aatgacaggaattcttcgtcatcaaaaaataaaaaggccagggagctggaaataccgatt
ttaacggaagaggaatttatggacatgataaaataa
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