Amycolatopsis rhabdoformis: VSH64_04575
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Entry
VSH64_04575 CDS
T09694
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00270
Cysteine and methionine metabolism
arhd00450
Selenocompound metabolism
arhd00670
One carbon pool by folate
arhd01100
Metabolic pathways
arhd01110
Biosynthesis of secondary metabolites
arhd01230
Biosynthesis of amino acids
arhd04980
Cobalamin transport and metabolism
arhd04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
VSH64_04575 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
VSH64_04575 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VSH64_04575 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VSH64_04575 (metH)
04980 Cobalamin transport and metabolism
VSH64_04575 (metH)
Enzymes [BR:
arhd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
VSH64_04575 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WSE31384
UniProt:
A0ABZ1ICV9
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Position
985015..988653
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AA seq
1212 aa
AA seq
DB search
MTQQRGTQQRGSQSVRDLRDLLDQRIAVLDGAWGTMLQGAGLTPEDYRDEWLEGHPKDVT
GDPDLLNLTKPDVILDVHRQYLAAGADITTTNTFTATSIGQADYGLQDHVREMNLRAAAL
ARQAADEFGGRFVAGSIGPLNVTLSLSPRVEDPAFRAVTYEEVKASYAEQIQALADGGVD
LLLIETIFDTLNAKAAITAAREVAPHLPLWISVTIVDLSGRTLSGQTVEAFWSSIAHAEP
LVVGVNCSLGAEEMRPHVEELAKIAGTYTACHPNAGLPNAFGGYDQTPDETGGMLGEFAG
EGMVNIVGGCCGTTPAHIAKIAEAVQGLAPRTVPEPPHRSRFSGLEPFTIGEDTGFVMIG
ERTNVTGSAKFRRLIEGDNHQAAVDVALEQVRGGANLLDVNMDADLLDSEQAMTTFLNLI
ATEPEVARIPVMVDSSRWSVLEAGLRCVQGKGVVNSISLKEGEGPFLQQARRIRDYGAGV
VVMAFDEKGQADTAQRKVEICARAYDLLTREAGFAGEDIIFDPNVLAVATGISEHNGYAK
AFIEALPLIKERCPGAHTSGGISNLSFSFRGNDVVREAMHSAFLFHAVRAGLDMGIVNAG
QLAVYEDIPKDLLELVEDVLFDRREDATDRLVEFADTVKGSGTKRTVDLSWREGPVTERL
SHALVHGIVDFIEADTEEARGQFERPLQVIEGPLMDGMKIVGDLFGSGKMFLPQVVKSAR
VMKRSVAYLEPFMEAEKEKMRLEGRIDTSRGQGKVVLATVKGDVHDIGKNIVGVVLGCNN
YEVIDLGVMVPAAQILDTAVAESADVVGLSGLITPSLDEMVSVATEMQRRGLKLPLLIGG
ATTSKQHTAVKIAPVYDHSTLHVLDASRVVGVVSDLLDTDRSDVLDAANRVEQQRLREQH
ENRHATPLLTVEQARANREQVSFDEVPVPEFTGVRVVEPSIAELREMVDWQFLFLAWELK
GKYPAILDQPVARELFDDANTLLDEIIADGSFTARGSYGYWPAHAEGDDIVLDGEYAGQG
FPMLRQQTKKPEGRANRCLADYVAPEGDHLGGFAVAIHGAEALAHRYEAEHDDYRAIMVK
ALADRLAEAFAEYIHLEARRRWFEPDAQPKLEDLHAERFRGIRPALGYPASPDHSEKKDL
FDLLGARELGIGLTESYAMTPAAAVSGLIFAHPESRYFTVGRLGRDQVEDYARRRGLELD
EVERWLRPNLAY
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcagcgtgggactcagcagcgtgggagtcagagcgtgcgggacctgcgggac
ctgctcgaccagcgcatcgccgtgctcgacggcgcgtggggcacgatgctgcagggcgcc
ggtctcacccccgaggactaccgcgacgagtggctcgagggacacccgaaggacgtcacc
ggcgaccccgacctgctgaacctcaccaaacccgacgtgatcctcgacgtgcaccgccag
tacctggccgcgggcgcggacatcacgaccaccaacaccttcaccgccacgagcatcggc
caggccgattacggcctgcaggaccacgtgcgcgagatgaacctgcgcgccgccgccctc
gcgcgccaggccgccgacgagttcggcggccggttcgtggccggctcgatcggcccgctc
aacgtcacgctctcgctctccccgcgcgtggaggacccggcgttccgcgcggtgacctac
gaggaggtcaaggcctcctacgccgagcagatccaggcgctggccgacggcggcgtcgat
ctgctgctgatcgagacgatcttcgacacgctcaacgccaaggccgccatcacggccgcg
cgcgaggtcgcgccgcacctgccgctgtggatctcggtcacgatcgtggacctgtcgggt
cgcacgctctcaggccagaccgtcgaggcgttctggagctcgatcgcgcacgccgagccg
ctcgtggtgggcgtgaactgctcgctcggtgccgaggagatgcggccccacgtggaggag
ctggcgaagatcgccggcacctacaccgcgtgccaccccaacgccggcctgcccaacgcg
ttcggcggctacgaccagacgcccgacgagaccggcggcatgctcggcgagttcgcgggc
gagggcatggtcaacatcgtcggcggctgctgcggcaccacgcccgcgcacatcgcgaag
atcgccgaagccgtgcagggtctcgcgccgcgcacggtgcccgagccgccgcaccgctcg
cgcttcagcgggctcgagccgttcacgatcggcgaggacaccgggttcgtgatgatcggc
gagcgcaccaacgtcaccggctcggccaagttccgccgcctcatcgagggcgacaaccac
caggccgccgtcgatgtcgcgctggagcaggtgcgcggcggtgccaacctgctcgacgtg
aacatggacgccgacctgctcgactccgagcaggcgatgaccacgttcctcaacctcatc
gccaccgagcccgaggtcgcccgcatcccggtgatggtcgacagctcgcgctggagcgtg
ctcgaagccggcctgcgctgcgtgcagggcaagggcgtggtcaactcgatcagcctcaag
gaaggcgagggcccgttcctgcagcaggcccgccgcatccgcgactacggcgccggcgtg
gtggtgatggccttcgacgagaagggccaggccgacaccgcgcagcgcaaggtcgagatc
tgcgcccgcgcctacgacctgctcacgcgcgaagccgggttcgccggcgaggacatcatc
ttcgaccccaacgtgctggccgtggccaccggcatcagcgagcacaacggctacgccaag
gcgttcatcgaagcgctgccgctcatcaaggagcgctgccccggcgcgcacacctccggc
ggcatctcgaacctgtcgttctccttccgcggcaacgacgtggtgcgcgaggcgatgcac
tcggcgttcctgttccacgccgtgcgcgcgggcctcgacatgggcatcgtcaacgcgggc
cagctcgcggtgtacgaagacatcccgaaggacctgctggagctcgtcgaggacgtgctc
ttcgaccgccgcgaggacgccaccgaccggctcgtggagttcgccgacacggtgaagggc
agcggcaccaagcgcacggtggacctgtcgtggcgcgaagggccggtcaccgaacgcctt
tcgcacgcgctggtgcacggcatcgtcgacttcatcgaggccgacaccgaggaggcgcgc
gggcagttcgagcggccgctgcaggtgatcgagggcccgctgatggacggcatgaagatc
gtcggcgacctgttcggctccggcaagatgttcctgccgcaggtggtgaagagcgcgcgc
gtgatgaagcgctcggtggcctacctcgagccgttcatggaggcggagaaggagaagatg
cgcctcgaaggccgcatcgacacctcccgcgggcagggcaaggtcgtgctcgccacggtg
aagggcgacgtgcacgacatcggcaagaacatcgtcggggtggtgctgggctgcaacaac
tacgaggtgatcgacctcggggtgatggtgcccgcggcgcagatcctcgacacggcggtg
gccgagagtgccgacgtggtcgggttgtccggcctcatcacgccttcgctcgacgaaatg
gtgagcgtggccacggaaatgcagcggcgcggcctcaagctgccgctgctgatcggcggc
gccaccacctcgaagcagcacacggcggtgaagatcgccccggtctacgaccactcgacg
ctgcacgtgctcgacgcgtcgcgcgtggtcggcgtggtgtccgacctgctcgacaccgac
cggtccgacgtgctcgacgccgccaaccgcgtggagcagcagcgcctgcgcgagcagcac
gaaaaccgccacgccacgccgttgctcaccgtggagcaggcccgcgccaaccgcgagcag
gtgtcgttcgacgaggtgccggtgccggagttcaccggggtgcgcgtggtcgagccgtcg
atcgccgagctgcgcgagatggtcgactggcagttcctgttcctggcctgggagctcaag
ggcaagtacccggcgatcctcgaccagcccgtggcgcgggagctcttcgacgacgcgaac
acgctgctcgacgagatcatcgccgacggatccttcaccgcgcgcggctcgtacggttac
tggcccgcgcacgccgaaggcgacgacatcgtgctggacggcgagtacgccggccagggt
ttcccgatgctgcgccagcagacgaagaagcccgagggccgcgccaaccgctgtctcgcg
gactacgtcgccccggaaggcgaccacctcggcggcttcgcggtggccatccacggcgcc
gaggcgctggcgcaccgctacgaagccgagcacgacgactaccgcgccatcatggtgaag
gcgctggccgaccggctggccgaggcgttcgcggagtacatccacctggaggcgcgccgc
cggtggttcgagcccgacgcgcagccgaagctcgaggacctgcacgccgagcgcttccgc
ggcatccgcccggcgctgggttaccccgcgagccccgaccacagcgagaagaaggacctc
ttcgacctgctcggcgcccgcgagctcggcatcgggctcaccgagtcctacgcgatgacc
ccggccgccgcggtgagcggcctgatcttcgcgcacccggagtcgcgctacttcaccgtc
gggcgactcggccgcgaccaggtcgaggactacgcccgccgacggggtctcgagctggac
gaggtcgagcgctggctgcggccgaacctggcctactga
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