Amycolatopsis rhabdoformis: VSH64_13260
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Entry
VSH64_13260 CDS
T09694
Symbol
dop
Name
(GenBank) depupylase/deamidase Dop
KO
K20814
Pup amidohydrolase [EC:
3.5.1.119
]
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
arhd03051
]
VSH64_13260 (dop)
Enzymes [BR:
arhd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.119 Pup amidohydrolase
VSH64_13260 (dop)
Proteasome [BR:
arhd03051
]
Prokaryotic proteasome
Bacterial regulatory particles
VSH64_13260 (dop)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WSE33072
LinkDB
All DBs
Position
complement(2943094..2944596)
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AA seq
500 aa
AA seq
DB search
MRRIMGTEVEYGIAVPGDATANPVLTSTQVVLAYAAAADIPRARRARWDYEVESPLRDAR
GFDLTGPGGPGHDPDVEDLGAANVILTNGARLYVDHAHPEYSAPEVTNARDAVIWDKAGE
RVMEEAALKAASVPGQPPLQLYKNNVDGKGASYGTHENYLCSRSTPFTAIIAGLTPFFVS
RQVVTGSGRVGIGQQSEEAGFQLSQRADYIEVEVGLETTLKRGIINTRDEPHADADKYRR
LHVIVGDANLSEYSTYLKVGTTALILDLIESGIRFDELKLDEPVRAVHKISHDPTLKTKV
ELANGKKFTGLDLQFAYHEIASANLERTGADEASKEVLRVWGEVLDALARDPQECADRLD
WPAKLRLLEGYRERDQLAWGAPRLRLVDLQYSDVRLAKGLYNRLVTRGSMKRLVTEEEVQ
AAITTPPSDTRAYFRGRALEKYATSIAAASWDSVIFDVGKESLVRIPTLEPLRGTKAHVG
KLLDAAATAEELVEAITGSD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcggatcatgggaaccgaagtcgagtacggcatcgccgtgcccggggacgccacg
gcgaacccggtgctcacctcgactcaggtcgtgctcgcctacgcggcggctgctgacatt
ccgcgggctcgccgggcccggtgggactacgaggtggagtcgccgttgcgcgacgcgcgg
gggttcgacctgacgggtccgggcgggccggggcacgacccggacgtggaggacctgggg
gcggcgaacgtcatcctcaccaacggtgcgcggttgtacgtggaccacgcgcacccggag
tattcggcgcccgaggtcacgaacgcgcgggacgcggtgatctgggacaaggccggtgag
cgggtgatggaggaggcggcgctgaaggcggcgtcggtgccgggtcagccgccgttgcag
ttgtacaagaacaacgtggacggcaagggtgcgagctacggcacgcacgagaactacctg
tgttcgcggtcgacgccgttcaccgcgatcatcgccgggctgacgccgtttttcgtgtcg
cggcaggtggtgacgggttcgggccgggtcgggatcggtcagcagagcgaagaggcgggg
ttccagctttcgcagcgtgcggactacatcgaggtcgaggtcggcctggagaccacgttg
aagcgcgggatcatcaacacgcgcgacgagccgcacgcggacgcggacaagtaccggcgg
ttgcacgtgatcgtgggtgacgcgaacctgtcggagtattcgacgtacctgaaggtgggt
acgacggcgctgatcctggatctgatcgagtcggggatccggttcgacgagctcaagctg
gacgagccggtgcgggcggtgcacaagatcagtcacgacccgacgttgaagacgaaggtc
gagctggcgaacgggaagaagttcacggggctggacctgcagttcgcgtatcacgagatc
gcgtcggcgaacctcgagcgcacgggtgcggacgaggcgtcgaaggaggtgctgcgggtc
tggggcgaggtcctggacgcgttggcgcgggatccgcaggagtgtgcggaccggttggac
tggccggcgaagctgcggttgctggaggggtaccgggagcgggatcagctggcgtggggt
gcgccgcggttgcggctggtggatctgcagtattcggacgttcggctggcgaagggcctg
tacaaccggctggtcacgcggggttcgatgaagcggctggtcacggaggaagaggtgcag
gcggcgatcacgactccgccgtcggacacgcgggcgtatttccggggccgggcgctggag
aagtacgcgacgtcgatcgcggccgcgtcgtgggattcggtgatcttcgacgtgggcaag
gagtcgctggtgcggatcccgacgttggagccgttgcggggcacgaaggcgcacgtcggg
aagctgttggacgcggcggcgacggccgaggagctggtcgaggcgatcaccggttcggac
tag
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