Amycolatopsis rhabdoformis: VSH64_20170
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Entry
VSH64_20170 CDS
T09694
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00300
Lysine biosynthesis
arhd00550
Peptidoglycan biosynthesis
arhd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VSH64_20170
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VSH64_20170
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
arhd01011
]
VSH64_20170
Enzymes [BR:
arhd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
VSH64_20170
Peptidoglycan biosynthesis and degradation proteins [BR:
arhd01011
]
Precursor biosynthesis
Amino acid ligase
VSH64_20170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WSE35181
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All DBs
Position
complement(4421811..4423355)
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AA seq
514 aa
AA seq
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MKAVAAPPRPARIDPVPLATLLARAGARLIAESPEAADLTVTGTTLRAQHVLPGDLFAGL
PGARAHGADFSDQAVAAGAAAVLTDAEGAARPALRDAGIPVLVHPDPRAALGEMAAWIYG
EPSLNLSVLGVTGTSGKTTTSYLVDSGLRAAGLTTGLIGTVETRIAGERLVSGFTTPEAP
DLQALLAVMLERGVTHVPMEVSSHALALGRVNGTRFAVGAFTNLSQDHLDFHHDMEEYFA
AKSLLFDGRSTTECVVVDSAWGRALLTPQTVTVSIEPGTDAVWRAADIEPTPAGEQTFTL
HGPDGLALAAKIPLPGTFNVANAVLAAAILGSAGIAPADIVAGLAAVEVPGRMERVYLGQ
DFTAVVDYAHKPAAVAQGLDALRARTEGRIITVLGCGGDRDTAKRPMMGEEAVRRSDLLI
VTDDNPRSEDPAAIRAAMLQGARGVGPSHGGEVVEIGDRRQAITHAVSLARAGDIVFIAG
KGHETGQEVQGVVHPFSDRDELEAAIRKHLEVTA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcggtcgccgcgccgccgcgcccggcccggatcgacccggtcccgctggccacc
ctgctcgcccgcgcgggcgcccggttgatcgccgagagccccgaggccgccgatctcacc
gtgaccgggaccacgctgcgcgcgcagcacgtgctgcccggcgacctgttcgccggcctg
cccggcgcgcgcgcccacggcgccgacttcagcgaccaggccgtggccgccggcgcggcc
gcggtgctcaccgacgccgaaggtgccgcgcggcccgcgctgcgcgacgccggcatcccg
gtcctcgtgcaccccgatccgcgcgccgcgctgggcgagatggccgcgtggatctacggc
gagccgtcgctgaacctctcggtgctgggggtcaccggcacctccggcaagaccaccacc
tcctacctcgtggactcgggcctgcgcgccgccggcctcaccacgggcctgatcggcacg
gtcgagacgcggatcgcgggcgaacgcctggtcagcgggttcaccacgccggaggcgccg
gacctgcaggcgctgctcgcggtgatgctggagcgcggcgtgacccacgtgccgatggag
gtctcgagccacgcgctcgcgctgggccgggtcaacggcacgcgcttcgcggtcggcgcg
ttcaccaacctctcgcaggaccacctcgacttccaccacgacatggaggagtacttcgcc
gccaagtcgctgctgttcgacggccgctccaccaccgagtgcgtggtcgtggacagcgcg
tggggccgggcgctgctcacgccgcagacggtgaccgtgtcgatcgagccgggcaccgac
gccgtgtggcgcgccgcggacatcgagccgacgccggcgggggagcagaccttcaccctg
cacggcccggacggcctcgcgctcgccgcgaagatcccgctgccgggcaccttcaacgtg
gccaacgccgtgctcgccgccgcgatcctcggcagcgccgggatcgcgcccgccgacatc
gtggccggcctcgcggccgtcgaggtgccgggccgcatggagcgcgtgtacctgggccag
gacttcaccgcggtggtcgactacgcgcacaagcccgcggccgtcgcgcaggggctcgac
gcgctgcgcgcccgcaccgagggccggatcatcacggtgctgggctgcggcggcgaccgc
gacacggccaagcgcccgatgatgggcgaggaagccgtgcgccgcagcgacctgctgatc
gtgaccgacgacaacccgcgctcggaggacccggccgcgatccgcgccgcgatgctccag
ggcgcgcggggcgtcgggccgtcgcacggcggcgaggtcgtggagatcggcgaccgtcgc
caggccatcacccacgccgtgtcgctcgcccgcgcgggcgacatcgtcttcatcgccggc
aagggccacgagaccggccaggaggtccagggtgtcgtgcaccccttctccgaccgggac
gagctcgaggccgccatccgcaagcatctcgaggtgaccgcgtga
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