Amycolatopsis rhizosphaerihabitans: AB5I40_42995
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Entry
AB5I40_42995 CDS
T11563
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
arhi Amycolatopsis rhizosphaerihabitans
Pathway
arhi00300
Lysine biosynthesis
arhi00550
Peptidoglycan biosynthesis
arhi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
arhi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB5I40_42995
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB5I40_42995
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
arhi01011
]
AB5I40_42995
Enzymes [BR:
arhi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AB5I40_42995
Peptidoglycan biosynthesis and degradation proteins [BR:
arhi01011
]
Precursor biosynthesis
Amino acid ligase
AB5I40_42995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
XEM76105
LinkDB
All DBs
Position
9184491..9186050
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AA seq
519 aa
AA seq
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MPDSPAKAAAAPPRPARIDPVPLATLLARAGARLIADRPEAADLTVTGATLRAQHVLPGD
LFAGLPGARAHGADFSEQALAAGAAAVLTDPSGAERPALRDAPVPVLVHPDPRAALGEIA
AWIYGEPSLHLSVLGVTGTSGKTTTSYLVDAGLRAAGRTTGLIGTVETRIAGERLASGFT
TPEAPDLQALLAVMLERGVTHVPMEVSSHALALGRVNGTRFAVGAFTNLSQDHLDFHKDM
EEYFAAKSLLFDGRSTTEVVVVDSAWGQALLTPQTVTVSIEAGADALWRAADIEATSAGE
QTFTLLGPDGLSRAAKIPLPGTFNVANAVLAAAILDSAGIEADDIVAGLAAVEVPGRMER
VYLGQDFTAVVDYAHKPAAVAQGLDALRARTDGRIITVLGCGGDRDTAKRPMMGEAAVRR
SDLLIVTDDNPRSEDPAAIRAAMMAGARAVGPAAGGEVVEIGDRREAIASAVSLARAGDI
VLIAGKGHETGQEVQGVVHPFSDRDELEAAIRKRLEVTA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
ctgccggacagcccggccaaggccgccgccgcgccgccccggccggcccggatcgacccg
gtcccgctggccactctgctcgcccgtgcgggagcccggctcatcgccgaccgtcccgag
gccgccgacctcaccgtcaccggcgccacgctgcgtgcgcagcacgtgctccccggcgat
ctgttcgccggccttcccggagcccgcgcgcacggagccgacttcagcgagcaggcgctc
gccgccggagccgcggccgtcctgaccgacccgagcggggccgagcggcccgcgctgcgc
gacgcgccggtgccggtcctcgtgcacccggacccgcgcgccgcgctcggcgagatcgcc
gcgtggatctacggcgagccgtcgctgcacctgtcggtcctcggcgtcaccggcacctcc
ggcaagaccaccacctcctacctggtcgacgcgggcctgcgcgccgccgggcgcaccacc
ggcctgatcggcacggtcgagacccggatcgccggcgagcgcctggccagcgggttcacc
acgccggaggccccggacctgcaggcgctgctcgcggtgatgctggaacgcggcgtcacg
cacgtgccgatggaggtctccagccacgcgctggcgctcggccgggtcaacgggacccgg
ttcgcggtgggcgcgttcaccaacctgtcgcaggaccacctcgacttccacaaggacatg
gaggagtacttcgccgccaagtccctgctgttcgacggccgctcgaccaccgaggtcgtc
gtggtcgacagcgcgtgggggcaggcgctgctcactccgcagacggtgaccgtgtccatc
gaagccggggccgacgcgctgtggcgggccgccgacatcgaggcgacgtcggcgggagaa
cagaccttcacgctgctcgggccggacgggctcagccgcgcggcgaagatcccgctgccg
ggcacgttcaacgtcgccaacgcggtgctcgccgcggcgatcctggacagcgcgggcatc
gaagccgacgacatcgtcgccgggctcgccgcggtggaggtgcccggccggatggagcgg
gtctacctcggccaggacttcaccgccgtcgtcgactacgcgcacaaaccggccgccgtg
gcacagggcctggacgccctgcgcgcccgcaccgacggccggatcatcaccgtgctcggc
tgcggcggcgaccgcgacaccgcgaagcgcccgatgatgggcgaggccgcggtgcgccgc
agcgatctcctgatcgtcaccgacgacaacccgcgttcggaggatccggccgcgatccgc
gccgcgatgatggccggggcccgcgcggtcgggcccgcggcgggcggcgaggtcgtggag
atcggcgaccggcgcgaggcgatcgcgtccgcggtgtcgctcgccagggcgggggacatc
gtcctgatcgcaggcaagggccatgagaccggccaggaggtccagggtgtggtgcacccg
ttctccgaccgggacgagctggaggccgccatccgcaagcgtctcgaggtgaccgcgtga
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