Aquimarina rhodophyticola: ACE939_07245
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Entry
ACE939_07245 CDS
T11453
Symbol
nth
Name
(GenBank) endonuclease III domain-containing protein
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
arho Aquimarina rhodophyticola
Pathway
arho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACE939_07245 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arho03400
]
ACE939_07245 (nth)
Enzymes [BR:
arho01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ACE939_07245 (nth)
DNA repair and recombination proteins [BR:
arho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACE939_07245 (nth)
Prokaryotic type
ACE939_07245 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
XHH97153
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All DBs
Position
1648618..1649277
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AA seq
219 aa
AA seq
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MTKQEKVNYVIKTLKDLYPTIPIPLDHKDPYTLLIAVLMSAQSTDVRVNQITPLLFERAD
NPYAMIKLSIDEIRAIIKPVGLSPMKAKGIHGLSHILIDKYNGEVPQSFEALESLPAVGH
KTASVVMSQAFGVPAFPVDTHIHRLMYRWGFTNGKNVTQTEKDAKRLFPEACWNDLHLQI
IWYGRQYSPARGWDLSKDIITRTIGRKTVLNDYYKKRPV
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaggaaaaggttaactatgttataaaaactctaaaagacttatatcctaca
ataccaatacctttggaccataaagatccttataccttattaatagccgtgcttatgagt
gcacaaagcaccgatgttcgagtgaatcaaattacacccttgttatttgaacgcgcagat
aatccatatgctatgatcaagctctcgattgacgaaataagagctatcataaaacccgtt
ggattaagccctatgaaagctaagggaattcacggtttatcgcatatcttaattgacaaa
tacaatggtgaggtaccacaaagttttgaagctttagaatctctacctgctgtaggacat
aaaactgcgagtgttgtgatgtcccaagcttttggtgtaccggcgtttcctgttgacacc
catattcatcgacttatgtatcgttgggggtttacaaacggaaaaaatgtaacacaaaca
gaaaaagatgctaaacgcctttttccagaagcgtgttggaatgacctacacctacaaatt
atatggtatggtagacagtattctcctgctagaggatgggatctatcaaaagatatcatt
acccgcactataggcagaaaaactgtattgaatgactattacaaaaaaagacctgtgtaa
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