Aeromonas rivuli: KYK33_12095
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Entry
KYK33_12095 CDS
T07884
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ariv
Aeromonas rivuli
Pathway
ariv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ariv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KYK33_12095 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ariv03400
]
KYK33_12095 (nth)
Enzymes [BR:
ariv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KYK33_12095 (nth)
DNA repair and recombination proteins [BR:
ariv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KYK33_12095 (nth)
Prokaryotic type
KYK33_12095 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
UBO72621
LinkDB
All DBs
Position
2612694..2613335
Genome browser
AA seq
213 aa
AA seq
DB search
MNNEKRRQILTRLRENNPAPKTELNYSTPFELLIAVLLSAQATDVGVNKATDKLYPVANT
PASILALGVDGLKQYIKTIGLFNTKAENVIKTCAILLERHGGEVPENREALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVSNRTGFAPGKNVDQVEEKLLKVVPAEFKLDVHHWLI
LHGRYTCLARKPRCGSCIIEDLCEYKEKIYPEN
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgaaaagcggcgccagatcctgacacgactgcgcgaaaacaatcctgcaccc
aagaccgagctcaactacagcacccccttcgagctgctcatcgcggtgctgctctcggcc
caggcgacagatgtcggcgtcaacaaggcgaccgacaagctctatccggtcgccaatacc
ccggccagcatactggcgctcggggtcgatggcctcaagcagtacatcaagaccattggc
ctgttcaataccaaggccgagaacgtcatcaagacctgcgccatcttgctggaacgccat
gggggtgaggtgcccgaaaaccgcgaggccctcgaggctctgccgggggtgggccgcaag
accgccaatgtggtgctcaacaccgcctttggctggccgaccatcgccgtggacacccat
attttccgggtgtcgaatcgcacaggttttgcgccgggcaagaatgtggatcaggtggag
gagaagctgctcaaggtggtccccgccgagttcaagctggatgtccatcactggctgatc
ctccatgggcgctacacctgtctcgctcgcaagccgcgctgcggctcctgtatcattgaa
gacttgtgtgagtacaaagaaaaaatctacccggagaactga
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