Arthrobacter sp. 'calajunan' LS16: AFL94_04015 Help Entry AFL94_04015       CDS       T04078                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism arl  Arthrobacter sp. 'calajunan' LS16 Pathway arl03030   DNA replication arl03410   Base excision repair arl03420   Nucleotide excision repair arl03430   Mismatch repair Brite KEGG Orthology (KO) [BR:arl00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     AFL94_04015    03410 Base excision repair     AFL94_04015    03420 Nucleotide excision repair     AFL94_04015    03430 Mismatch repair     AFL94_04015  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:arl03032]     AFL94_04015    03400 DNA repair and recombination proteins [BR:arl03400]     AFL94_04015 Enzymes [BR:arl01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      AFL94_04015 DNA replication proteins [BR:arl03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      AFL94_04015 DNA repair and recombination proteins [BR:arl03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      AFL94_04015    NER (nucleotide excision repair)     GGR (global genome repair) factors      AFL94_04015    MMR (mismatch excision repair)     DNA ligase      AFL94_04015   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       AFL94_04015 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT Nlig-Ia BRCT_2 Motif Other DBs NCBI-ProteinID:  ALD63240 LinkDB All DBs Position 889596..891866 Genome browser AA seq 756 aa AA seqDB search MSENDVTPVETTNAPPAPARERHDELVEAIRTHREAYYQQDAPLVSDSEYDALFQELELL EAQYPILAGQDSPTQEVGGEVSAAFAPVTHASRMYSLEDVFSLEELDAWLERAGANANRL HPQIPVRWLCEVKIDGLALNLTYRDGKLVRAATRGDGTTGEDVTHNAMTISDIPQQLSGS GWPAEFEVRGEVFIATDDFNAYNEALIEQGKAPLANPRNAAAGSLRQKDPEQTAKRPLRM FVHGLGRSRDFPITEQSQAYELMREWGLPVSPYSRVVESLAQVREFIAEHGEKRHELIHD IDGIVVKVDDLSTQEQLGYTSRVPRWAVAYKYPPEEVHTKLLDIQVQVGRTGRVTPFGVM EPVLVAGSTVARATLHNQEVVKAKNVLIGDTVILRKAGDVIPEIVGPVLALRDGTEVDFI MPTECPSCGQPLAPAKEGDVDIRCLNAESCPVQLTERVAYLGGRSALDIEALGYEAAAAL TSGPGEDPATQGGLILPAGPGPLRNEAELFDLKDKLDQLAEVKVWREKRVKGEGTGRFDL VPYFFTKATAKKPSVPTKSTEKLFDELEKAKGNPLWRVLVALSIRHVGPNASRAIATRYG SMDALLEVIDAGNAVEELSQIDSVGSIIAEALVDWFKVDWHREIVSAWQAAGVKMVDERD ANITKNLEGLAIVVTGTLENYSRDTAKEAIIVRGGKATGSVSKKTDFLVAGEAAGSKLDK AQSLGVPVLDEAGFGILLEQGPDAAREAALSAPEGA NT seq 2271 nt NT seq  +upstreamnt  +downstreamnt gtgagtgaaaatgacgtaacgccagttgagaccacgaacgccccgcctgcaccggcgcgt gaacgacacgacgagcttgtcgaggcaatccggacgcatcgggaagcctactaccagcag gatgccccgctggtctcagactccgaatacgacgcgttgttccaggagctggaactgctc gaagcccaataccccatcctggcgggccaggattcacccacccaggaggtcggcggcgag gtgtccgcggccttcgccccggtgacccacgccagccgcatgtactcgctggaagacgtg ttctccctggaggaattggacgcctggctggaacgcgccggcgccaacgccaaccgcctg cacccgcagattcccgtgcgctggttgtgcgaggtgaaaatcgacggcctggccctgaac ctcacctaccgcgacggcaagctggtccgcgccgccacccgcggcgacggcaccaccggc gaagacgtcacccacaacgccatgaccatcagcgacatcccgcagcagctgtccggttcg ggctggccagcggaattcgaggtccgcggcgaggtcttcatcgccaccgacgacttcaac gcctacaacgaggcgctgatcgagcagggcaaggcgccgctggccaacccgcgcaacgcc gcggccggctcgctgcgccagaaggacccggaacagaccgccaagcgcccgctgcgcatg ttcgtgcacgggctggggcgcagccgcgacttcccgatcaccgagcagtcccaggcctac gagctgatgcgcgagtggggactgccggtgtccccgtacagccgcgtggtcgagtcgctg gcccaggtgagggagttcattgccgagcacggcgagaagcgccatgaactgatccacgac atcgacggcatcgtggtgaaggtcgacgacctctccacccaggagcagctgggctacacc tcgcgcgtgccgcgctgggccgtggcctacaagtacccgccggaagaggtgcacaccaag ctgctggacatccaggtccaggtcgggcgcaccggcagggtgacccccttcggcgtcatg gaaccggtgctggtggcagggtccaccgtggcccgcgcgaccctgcacaaccaggaggtc gtcaaggccaagaacgtgttgatcggggacaccgtcatcctgcgcaaggcgggagacgtg atcccggagatcgtcggcccggtgctcgcgctgcgcgacggcaccgaagtcgacttcatc atgcccaccgaatgcccctcctgcggccagccgctggccccggccaaggaaggcgacgtg gacatccgctgcctgaacgcggaatcctgcccggtgcagctcaccgaacgcgtcgcctac ctgggcggacgcagcgccctggacatcgaggcgctgggctacgaggccgcggccgcgctg accagcgggccgggcgaggacccggccacccagggcgggttgatcctgccggcgggcccg ggcccgctgcgcaacgaagccgagctcttcgacctgaaggacaagctggatcagctggcc gaggtcaaggtctggcgcgaaaagcgggtcaagggggagggaacgggcaggttcgatctg gtgccctacttcttcaccaaggccaccgcgaagaagccctcggtgccgaccaagagcacc gagaagctgttcgacgagctggagaaggccaagggcaatccgctgtggcgggtgctggtg gcgctgtccatccgccatgtcggacccaacgcctcccgcgccatcgccacccgctacggt tccatggacgcgctgcttgaggtcatcgatgccggcaacgcggtggaggagctgagccag atcgactcggtgggctccatcatcgccgaggccctggtcgattggttcaaggtcgactgg caccgcgagatcgtcagcgcctggcaggcggccggggtgaagatggtcgacgagcgcgac gcgaacatcaccaagaacctcgaaggcctggccatcgtggtcaccgggacgctggagaac tactcgcgcgacaccgccaaggaagcgatcatcgtgcgcggcggcaaggccaccggcagc gtctcgaagaaaaccgatttcctggtggccggcgaggccgccggatccaagctggacaag gcccagtcgctgggggtgccggtgctcgatgaagccggtttcggcatcctgctcgaacag gggccggatgcagcccgcgaagcggcgctgtccgcaccggaaggagcataa

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