Amycolatopsis roodepoortensis: NQK81_10875
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Entry
NQK81_10875 CDS
T08507
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo00300
Lysine biosynthesis
aroo00550
Peptidoglycan biosynthesis
aroo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NQK81_10875
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NQK81_10875
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aroo01011
]
NQK81_10875
Enzymes [BR:
aroo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
NQK81_10875
Peptidoglycan biosynthesis and degradation proteins [BR:
aroo01011
]
Precursor biosynthesis
Amino acid ligase
NQK81_10875
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF1611
Motif
Other DBs
NCBI-ProteinID:
UUV36158
LinkDB
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Position
complement(2355464..2356969)
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AA seq
501 aa
AA seq
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MPLGTLLARAGARLVVGGDDYPAAAELTVTGSTLRAQHVLPGDLFAALPGARAHGADFSD
QAIAAGAAAVLTDEAGAERPVLRDAGVPILVHPDPRAALGEIAAWIYGEPSLELSVLGIT
GTSGKTTTSYLVDAGLKAAGLTTGLIGTVETRIAGERLVSGFTTPEAPDLQALLAVMVER
GVTHVPMEVSSHALSLGRVNGTRFAVGAFTNLSQDHLDFHKDMEEYFAAKSLLFDGRSTA
EVVVVDSAWGQALLTPHTVTVSTEPGTDALWRATELTPTPAGEQTFTLHGPEGLTAAAKI
PLPGEFNVANAVLAAAILNTAGVPLDAIVAGLAAVEVPGRMERVYLGQPFTAVVDYAHKP
AAVAQGLDALRARTEGRIITVLGCGGDRDTAKRPVMGEAAVRRSEVLIVTDDNPRSEDPA
AIRAAMLAGARNAGPALGGEIVEIADRREAIIHAVELARPGDIVFIAGKGHETGQEVQGV
VHPFSDREELASAIRRRLESE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgggcacgctgctcgccagggcgggcgcgcggctcgtggtgggcggcgacgac
tacccggccgcggccgagctgacggtcacgggcagcacgctgcgcgcgcagcacgtcctc
cccggtgacctcttcgccgcgcttcccggcgcccgcgcccacggcgcggacttcagcgat
caggccatcgcggccggcgcggccgccgtgctcaccgacgaggccggcgccgagcgcccc
gtgctccgcgacgccggcgtgccgatcctggtgcacccggacccgcgggccgccctcggc
gagatcgccgcctggatctacggcgagccgtcgctggagctgtccgtcctcggcatcacc
gggacgtcgggcaagaccacgacgtcgtacctggtcgacgccgggctcaaggcggccggg
ctcaccaccgggctcatcggcacggtcgagacccggatcgcgggggagcggctggtcagc
gggttcaccacccccgaggcgccggatctgcaggcgctcctcgcggtgatggtggagcgc
ggcgtcacgcacgtgccgatggaggtctccagccacgcgctgtcgctgggccgggtcaac
ggaacgcgcttcgcggtcggcgccttcaccaacctctcccaagaccacctggacttccac
aaggacatggaggagtacttcgccgccaagtcgctgctgttcgacggccggtccaccgcc
gaggtggtcgtcgtcgacagcgcctggggccaggcactcctcaccccgcacacggtcacc
gtgtccaccgagccgggcacggacgcgctgtggcgcgccaccgagctgacccccaccccg
gcgggggaacagaccttcaccctccacggtcccgaaggcctcaccgccgcggccaagatc
ccgctgccgggcgagttcaacgtggcgaacgccgtgctcgcggccgcgatcctgaacacc
gccggtgtcccgctcgacgccatcgtcgccgggctcgccgcggtcgaggtgccgggccgg
atggagcgggtctacctcggccagccgttcaccgccgtcgtcgactacgcgcacaagccc
gccgccgtcgcgcaggggctcgacgcgctgcgtgcccggaccgagggccggatcatcacc
gtcctcggctgcggcggggaccgcgacaccgccaaacgcccggtgatgggcgaggcggcg
gtccggcgcagcgaggtcctgatcgtgaccgacgacaacccgcgttcggaggacccggcc
gcgatccgggcggcgatgctggccggtgcccgcaacgccgggccggccctcggcggcgag
atcgtcgagatcgccgaccgccgggaagccatcatccacgcggtcgagctggcccggccc
ggcgacatcgtgttcatcgcgggcaagggtcacgagaccggccaggaggtccagggtgtc
gtgcacccgttctccgaccgggaagagctggcctccgccatccgcagacgtctggagtca
gagtga
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