Amycolatopsis roodepoortensis: NQK81_23140
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Entry
NQK81_23140 CDS
T08507
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
aroo
Amycolatopsis roodepoortensis
Pathway
aroo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aroo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NQK81_23140 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aroo03400
]
NQK81_23140 (nth)
Enzymes [BR:
aroo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NQK81_23140 (nth)
DNA repair and recombination proteins [BR:
aroo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NQK81_23140 (nth)
Prokaryotic type
NQK81_23140 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
UUV27733
LinkDB
All DBs
Position
complement(4878785..4879468)
Genome browser
AA seq
227 aa
AA seq
DB search
MKRCLDDEFPDAHCELDFTTPLELLVAVVLSAQTTDVRVNQVTPALFARYRTAADYAGAD
RAELEEYLRPTGFFRAKANSVMGLGAALVERYDGEVPGKLKDLVTLPGVGRKTANVVLGD
AFGVPGITVDTHFGRLVRRWGWTEEEDPVKVEHAVGELIPRKEWTLLSHRTIFHGRRVCH
ARKPACGACPLAKMCPSYGIGPTEFEEAAKLVKGEEREHILELAARR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgttgcctcgacgacgagttcccggacgcgcactgtgagcttgacttcaccact
ccgctcgaattgctggtcgcggtcgtgctttcggcgcagaccaccgacgtccgcgtgaat
caggtcacgcccgccctcttcgcccgctatcggacggccgccgattacgccggcgccgac
cgcgccgaactcgaggagtacctccggccgacggggttcttccgcgccaaggcgaactcg
gtgatggggctgggcgcggcgctggtggagcgctacgacggcgaagtgcccggcaagctg
aaggatctggtcacgctgccgggtgtcggccgcaagacggccaacgtcgtcctaggcgac
gccttcggcgttcccgggatcaccgtcgacacccacttcggccgtctcgtccgccgctgg
ggctggaccgaggaggaagacccggtcaaggtcgagcacgccgtcggcgagctgatcccg
cgcaaggagtggacgctcctgtcgcaccggacgatctttcacggccgccgcgtgtgccac
gcccgcaaacccgcctgtggcgcctgtccgctggccaagatgtgtccctcgtacggaatc
ggcccgacggagttcgaagaggccgcgaagctggtcaagggcgaagaacgcgagcacatc
ctcgaactggcggcccgccggtga
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integrated database retrieval system
