KEGG   Anguilla rostrata (American eel): 135238651
Entry
135238651         CDS       T10705                                 
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
  KO
K03174  TNF receptor-associated factor 3
Organism
arot  Anguilla rostrata (American eel)
Pathway
arot04620  Toll-like receptor signaling pathway
arot04621  NOD-like receptor signaling pathway
arot04622  RIG-I-like receptor signaling pathway
arot05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:arot00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    135238651 (traf3)
   04621 NOD-like receptor signaling pathway
    135238651 (traf3)
   04622 RIG-I-like receptor signaling pathway
    135238651 (traf3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    135238651 (traf3)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF3_RING zf-C3HC4 zf-C3HC4_2 Rod_CreS XopP NOCA1_mid Fez1 zf-C3HC4_4 CCDC18_2nd PEA2_C CCDC113_CCDC96_CC DUF1664 EzrA ATG17_like ATG16 zf-TRAF_2 CCDC39 OmpH MscS_porin CEP89 CALCOCO1 ACBP4_C CCDC89 IFT74 DUF7474 YonD_C zf-RING_4 Spectrin_Anc-1 CENP-K TBCA_PH Macoilin BLOC1_2 PUMA_CC GAS Mua Exonuc_VII_L Occludin_ELL CCDC18_1st SOGA LIP-1 TMEM120A-B ENTR1 MPS2 Golgin_A5 DUF7856 FapA DUF2730 DLP_helical TolA_bind_tri HAUS1
Other DBs
NCBI-GeneID: 135238651
NCBI-ProteinID: XP_064162872
LinkDB
Position
1:85347268..85379345
AA seq 597 aa
MPFTEAESVKIAQKNSGVGLDGDKDLIHVMSSGRNGDGREVQVPQQRAPSLAQKPWSEPG
FLPLQAGFRDHFVLPPEPKYCCQACRLVLCNPRQTECGHRFCETCISELLRASHPVCPAD
MEPLFEDKIFRDVCCHREIMGLKVYCRSEKNGCREQMCLHQVMDHLTVCPYFEVPCPLGK
CKERMMRKDMPDHLNWKCRHREATCEFCKHKMAQTELQKHKDTVCPAFPVACPNNCTYSS
ILRSELQRHQQDCPKAQVTCSFHRYGCTFKGLNQEMKEHDSLCVSEHLRLMVAKNTTLEA
KVEDVKGELQERYKVLPGLNARLMEVESRHEEMREKNRQLEQKLANIQKQLSSHSEKLME
LEMELRSFRSVREDVETLRGAVESIRTRVTALEGSRGPSNSGPHALAGSLETQLSRHDDM
LSVHEIRLADMDLRFQVLETASFNGTLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFG
YKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLTWPFKQKVTLMLMDQGPARKHLGDA
FKPDPNSSSFRRPTGDMNIASGCPLFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq 1794 nt   +upstreamnt  +downstreamnt
atgccgtttaccgaagcggagtctgttaagattgcccagaaaaacagtggtgttggattg
gacggcgacaaggatctaatacatgtgatgtcatcagggcggaatggggacggccgtgag
gtgcaggtgccccagcagagggcgccctcgctggcgcagaagccctggagcgagcctggc
ttcctgccgctccaggctgggttccgggaccacttcgtcctgccgcccgagcccaagtac
tgctgccaggcctgccggctggtcctgtgcaacccgcgccagaccgagtgcggccatcgc
ttctgtgagacctgcatctctgagctgctcagagcgtcccacccagtgtgtcctgcagat
atggagccactctttgaggacaagatattcagggatgtgtgctgccacagggagatcatg
ggtctgaaggtgtactgcaggagtgagaagaatggttgcagagaacagatgtgtctacat
caggttatggatcacctgacggtgtgcccatattttgaggtgccatgccctctggggaag
tgtaaggagaggatgatgaggaaggacatgcccgaccatctgaactggaagtgtcgacac
cgcgaagccacctgcgaattctgcaaacacaagatggcccagacagagctacagaaacac
aaggacaccgtgtgccctgctttccctgtggcctgtcccaataactgcacctactcctcc
atcctgcgcagcgagctgcagagacaccagcaggactgtcccaaggcccaggtcacctgc
tccttccaccgctacggttgcaccttcaagggtctgaaccaggaaatgaaagagcacgac
tccctctgtgtctctgaacacctgcggctgatggtggccaagaacactaccctggaggct
aaggtggaggatgttaagggcgagctacaggagcgctataaggtgctgccaggtctgaac
gctcggctgatggaggtggagtctcggcacgaggagatgagagagaagaaccggcagctg
gaacagaagctggcaaatatacagaagcagctgagctctcactcagagaagctgatggag
ctggaaatggagctgcgttccttccgttcggtgcgtgaggatgtggagaccctgcggggg
gcggtagagagcatccgcacacgcgtcactgcgctggagggcagccgtggtccctccaac
tccggaccgcatgcgctcgcaggctccctggagacgcagctctctcgccatgacgacatg
ctgagcgtgcacgagatcaggctggcggacatggacctccgtttccaggtgctggagacg
gccagcttcaacggcacgctcatctggaagatccgtgactacaagcggcggaaacaggag
gcggtggcgtctaagacgctgtccctgtacagccagcccttctacaccggctactttggg
tacaagatgtgcgcgcgcgtgtacctgaacggggacggcatgggcaagggcacgcacctg
tcgctgttcttcgtggtgatgcgcggcgagtacgacgccctgctcacctggcccttcaag
cagaaggtgacgctgatgctgatggaccagggccccgcccgcaagcacctgggcgacgcc
ttcaagcccgaccccaacagcagcagcttccgcagacccacgggagacatgaacatcgcg
tccggctgccccctcttcgtcgcgcagaccgtgctggagaacggcacctacatcaaggac
gacaccatcttcatcaaggtcaccgtggatacctctgatctgcccgacccctga

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