Anguilla rostrata (American eel): 135243571
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Entry
135243571 CDS
T10705
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arot04040
]
135243571
Ion channels [BR:
arot04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
135243571
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Myc_target_1
Motif
Other DBs
NCBI-GeneID:
135243571
NCBI-ProteinID:
XP_064171574
LinkDB
All DBs
Position
17:complement(8196832..8227173)
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AA seq
1772 aa
AA seq
DB search
MRPKSKSLLDLWVENREAPAKDAEDLSTRLRKLSLLRDRDLVTSIARQNVEMAGLLPPTG
TDVFRRFTPESLAEIEKLAEKNVQTEGTKNAEVAEEDLPKPSSDLEAGKSLPFIYGDPPP
ELLNVPLEDLDPFYKAQKTFIVINKGNTIFRFNAEPACYLLSPFNILRRGAIRVHIHSIF
RVFIMLTIVLHTLWLSVSYPTAWLNRHAEYVFTGIFTFEAVLKVLSRGFCVGHFTYLHDP
WNWLDFLLITMAYANEFIDLPNLAALRMFRVLQTLESPALKIFTGALIQSAKKLAGVMFF
IIFCLSVLALIALQLFMGSLRQKCIVWPINETNYATSPSGYTTDGPDSIDFDVYMNSQEN
YYYFPGHLDALLCGNSSDAGICPEGYTCMKAGPNPNYGYTSYDNFGLAFLALFRLMTRDF
WENLFQLTMRAAGQSFMPLFAVAILVGFYLINLVLAVVAMAYAEQNAAAISEARENEKEY
QRILRQLKKREAQGMEKKNEKEEMSSTRPSLLELDKPSLRKRASREVSGASKEIKELEET
KRPPGCYKCANIFLKWDCCGPWIVFKKWVHFVVMDPFMDLFITICVIINTVFMALECYPM
SPEHEELLSFGNLVFTLIFAAEMVVKIIAMDPYYYFQVGWNIFDSIIATLSLLELGLADV
EGLSVLRSFRLLRIFRLGESWPAFNMLIKIMRNSVGALGKVTLVLAVTVTTFAMVGVQLF
GKSYRDCVCKIAQDCELPRWHMHDFFHSFMLVFRILCGEWIETMWDCMEVAGLAVCVVFY
ITVLVIGNLVVVNLFMALLWNSFRGNYPAMYSEARNMVNMQIAMKRISRGFAWVKAFIIR
PTNSPLGMKLKAGKDGDRDEGDAKKENLALEHVGIDCSLAVPIAKAELDLDDENDTDALK
NGDAEKSPQCSAVDRKPEEVAIATEKDGPQDCFTKGCIRRCPWLKVDITQGRGKMWWNFR
RTCFAIVEHSCFQAFITFVILVSCGALAFEDMYLEQRKVLSIILAYAELVFTSVFILEML
LKWLAYGFKTYFTSAWCWLEFLIVNVSLLSMMVTLGFPVFGSVNVLRALRIPSRIEGTRV
VLNTLVGAIPSLFNVVLACITLWLIFSIMGVNLFAGKFYSCMNTTSEEMFHANDINNRTE
CSNLIFANFTDVTWENRMVNFDSVPMGYLSLLQVGTNKGWLDLIYAAMDSRSVEDQPVYE
DNLYMYLYFVFFIFGSIFTLCFFLGAYIDYYNQQKKKLGGQDLFMTEGQRKYWMKELDSK
EQRPIPRPQNCLQGLAFDFVTKPFIEIFMMVLLCIYMVILMTETDNQSLEMEIIQYFSTL
VYVLILIIECALKIFALRQYFFNVGWNIFDFVVVILSILSIVLADLIEKYFVSPALFRIM
RAARIGCILRLIRGFEGVNKLLRALMMSLPAIFNFVLLLFINMFIFSIIGMSLFGHVKKM
HGINDMTNFETFGNSMLSMFQTTTLAGWDGLLLPILHSGPPDCDPYFENPGTSVRGNCAS
PTLGIIFFCSYIIISLLIVVNMYIAIILENFKVTTKESADPLCEDDFEMFYETWEKFDPD
ATQYVDYSQLSDFCDALKDPLRIPKPNTIKLITMDLPIAPGDKIHCRDILMALTTEVLGD
SGEMDSLKTSIEEKFMMKNPSKLAYEPITTTLRRKQEEVAASIIQRACRKHLPKFCEKMA
KAKEDKEQPEKERMTAKPINSLYGSQAAKEDLATMEAQPLMGSVDSQPEADPKDIQSSGA
PVHVMTKVILRSATSSIPQPTVPASNSTDSDI
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccaaaagcaaatccttgctggacctgtgggtcgagaaccgggaggcaccagcg
aaggatgccgaggacctttcgacgcgtcttcgcaagctgtcactcctgagagaccgtgac
ctggtcacatctatcgcacggcagaatgtcgagatggccggcctgctccctcccacaggg
accgacgtgtttcgccgcttcaccccggagtcgctggcggagatcgagaagctggctgag
aaaaatgtgcagacggaggggacgaagaacgcagaggtggccgaggaggacctgcccaag
cccagcagtgacctggaggcgggcaagagcctgccgttcatctacggagacccgccgccc
gagctgctcaacgttcccctggaggacctggatcctttctacaaagcacagaaaaccttt
attgtcatcaacaaagggaatacaatcttcaggtttaatgctgaacctgcctgctatctt
ctgagccctttcaacattcttagaagaggagccatcagagtccacatacattcaattttt
cgtgtgttcatcatgctaactattgtgttacacactctgtggctgtcagtctcctatccc
acagcttggttaaacagacatgcagagtatgtatttactggtatttttacctttgaggca
gtactcaaagtgctgtctcgaggcttctgtgtgggccactttacatacctgcatgatcca
tggaactggctggatttccttctgattacaatggcgtacgccaacgaattcatcgaccta
cccaatctcgctgccctccggatgttccgcgtgcttcaaacactggaaagccctgctctg
aaaatcttcacgggggccctgatccagtcggcgaaaaagctggctggcgtgatgttcttc
atcatcttctgcctcagtgtcctcgccctcattgcgttgcagctcttcatgggcagcctg
cgccagaagtgcatcgtgtggcctataaatgagaccaattatgccacttccccctccggc
tacactacggatggccccgactcaatcgacttcgatgtctacatgaacagccaagagaac
tactactattttcctggacacttggacgctcttctttgtggaaacagctctgatgctgga
atttgcccagagggctacacgtgtatgaaggctggaccaaacccaaactatggctacaca
agctacgataacttcggcttggctttcctggctctcttccgtcttatgacacgggacttc
tgggagaatctgtttcagctgacaatgcgcgcagcgggacagtccttcatgcccctcttc
gccgtcgccatcttggtcggcttctatctcatcaacctcgtcctggccgtggtggccatg
gcgtacgcagagcagaacgcagctgccatttcggaggcccgggaaaacgaaaaggagtac
cagaggattctgaggcagctgaagaagcgggaggcgcagggaatggagaagaagaatgag
aaagaggagatgtccagtacaaggcccagtttgcttgaactggacaaaccaagcctgcgt
aaaagagcctctcgtgaggttagtggggccagcaaagagatcaaagagcttgaggagacc
aagagaccaccggggtgctacaagtgtgccaacattttcctgaaatgggactgttgtggt
ccgtggatcgtctttaaaaaatgggtgcactttgtggtgatggacccattcatggactta
ttcatcaccatctgcgtaatcatcaacactgtgttcatggctttggagtgttaccccatg
tcgccggagcacgaggaacttctgagttttggaaacctggttttcactttgatcttcgct
gctgagatggtcgtcaaaatcattgccatggacccatactattatttccaggttgggtgg
aacattttcgacagcattattgccactctgagcctgctggagctgggtctggctgatgtt
gagggcctgtctgtgctcaggtcattccgtttgctgcgtatctttaggctgggggagtcg
tggcctgccttcaatatgctcataaaaatcatgaggaactcggtgggtgcccttggcaag
gtcaccctggtgctggccgtaacggtcacaaccttcgccatggtgggcgtgcagctgttc
ggtaagagctacagggactgcgtgtgcaagatcgcccaggactgcgagctgccgcgctgg
cacatgcacgactttttccactccttcatgctggtcttccgcatcctctgtggggagtgg
attgagaccatgtgggactgcatggaggtggctggcctggccgtgtgcgtagttttctac
atcacggtcctggtcatcggtaatctggtggtggttaacctgttcatggccctgctgtgg
aactctttccgcgggaactatccggccatgtacagcgaggccagaaatatggtgaacatg
cagattgccatgaagaggatcagcaggggcttcgcctgggtcaaagccttcatcatcagg
ccaacgaatagtccgctgggaatgaagctgaaggcgggaaaggatggagacagagacgaa
ggcgacgccaagaaggaaaacctcgccctggagcatgtgggcatcgactgctcccttgcc
gtgcccattgccaaggcagagttggacttggatgatgaaaatgataccgatgcactcaaa
aacggggatgcagagaaatccccacagtgcagtgctgtggaccgcaaaccagaggaggtg
gccattgcaacagaaaaggacggtccacaggactgcttcaccaaaggatgcatcaggcgt
tgcccgtggctgaaggtggacatcacgcagggccgtgggaagatgtggtggaacttcagg
aggacgtgcttcgccattgtggagcacagctgcttccaggctttcatcacctttgtcatc
ctggtcagctgtggagctctggcttttgaggatatgtaccttgagcagcgtaaagtttta
agcatcatcctggcatatgctgagctagtcttcactagcgtgttcattcttgaaatgctc
ctaaaatggttggcatatggtttcaagacctacttcaccagtgcctggtgttggctggaa
ttccttattgtaaatgtttctctcctaagcatgatggttactctgggcttccccgtgttt
ggatctgtcaatgttttgagagctctcaggatcccatccagaattgaggggacgagggtt
gtgctgaacactcttgttggggccattccctccctcttcaacgttgtcctggcctgcatc
actttatggctcatcttcagtatcatgggagtcaacctgtttgctgggaagttctactct
tgcatgaacaccaccagcgaggagatgttccacgcaaatgacatcaacaaccgcacagag
tgctccaatttaatctttgcgaacttcactgatgtaacttgggagaataggatggtgaac
ttcgacagcgttcccatgggctacctctctctcctgcaagtgggaacgaataaaggctgg
ttggacctcatatatgcagcaatggattcacgttcagtcgaagatcagcctgtgtatgaa
gacaacctctacatgtacctctactttgtcttcttcatttttgggtccatcttcacctta
tgttttttcctcggtgcttatattgactactataaccagcaaaaaaaaaagttaggaggg
caggatctcttcatgacagagggacagagaaagtactggatgaaagaactggactctaaa
gaacagaggcccattcccagacctcagaactgtctccaaggcctggcatttgacttcgtc
acaaagccattcattgaaatcttcatgatggttctgctttgcatctatatggtgatcttg
atgacggagactgacaatcaaagtctggaaatggagattatccagtactttagcactctg
gtctatgtcctgatcttaatcatcgagtgtgccctcaaaatatttgcactcagacaatat
ttcttcaacgtaggatggaatatttttgattttgtggtggtcattctctccatactgagt
attgtgctggcggacctcatagagaagtactttgtgtcgcctgcacttttccgtataatg
agagcggccagaattggctgtatcctgcgtctcatcaggggattcgagggcgtcaacaag
cttctaagggctctgatgatgtcacttcctgccatctttaattttgtcctgctcctcttc
ataaatatgttcatcttctccatcatcggcatgtcactgtttggtcatgtgaagaaaatg
catggaatcaatgacatgacaaactttgagacattcggcaacagcatgttgtccatgttt
cagaccacaacattagcaggctgggatggacttctccttcccattctgcacagtgggcct
ccagactgcgacccttattttgagaatccaggcactagcgtgaggggaaactgtgccagc
cccaccctgggcatcatcttcttctgcagctacatcataatttcccttctgattgtggtc
aacatgtacatcgccatcatcctggagaacttcaaagtgactaccaaggagagtgccgac
ccgctgtgcgaggacgactttgagatgttctacgagacctgggagaagtttgacccggat
gccacccagtatgtggactatagccagctgtcggatttctgtgatgcattgaaggaccct
ctgaggatccccaagcccaacaccattaagctgatcacaatggacctacccatagccccc
ggtgacaagatccactgccgggacatcctgatggctctaaccacagaggtgctgggtgat
tcgggggagatggactccctaaagaccagcatagaggagaagttcatgatgaaaaaccct
tccaagctggcctacgagcccatcaccaccaccttgaggcgcaaacaggaggaggtggcc
gccagcatcatccagcgagcctgccgcaagcacctaccaaagttttgtgagaagatggcc
aaggcaaaggaggacaaggagcagccagagaaagagagaatgactgccaaaccgatcaat
tccctctacggcagtcaggcagctaaggaggacctagcgaccatggaagcccaaccctta
atgggctctgtggatagccagcctgaggcagacccaaaggacattcagtccagtggagcc
ccagtacacgtcatgaccaaggtgattctgcgttctgccacatcctccatcccccaaccc
accgtacctgcaagcaactcgacagactctgacatttaa
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