Anguilla rostrata (American eel): 135243572
Help
Entry
135243572 CDS
T10705
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
arot Anguilla rostrata (American eel)
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arot04040
]
135243572
Ion channels [BR:
arot04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
135243572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Zip
Lustrin_cystein
IQ
Motif
Other DBs
NCBI-GeneID:
135243572
NCBI-ProteinID:
XP_064171577
LinkDB
All DBs
Position
17:complement(8154522..8179909)
Genome browser
AA seq
1821 aa
AA seq
DB search
MVGLLHHTGNDAFRRFTPESLAEIERRMAEEKAEQEEHKNVEVAEEDLPKPRGDLEAGKS
LPFIYGDPPPELLNVPLEELDPFYKAQKTFIVITKGNTIFRFNAEPACYLLSPFSIVRRG
AIRVLIHSLFSMFIMLTILSNCVFMTMSNPPPWSKTVEYVFTGIYTFEATIKVLSRGFCM
GSFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLADVMILTVFCLAVFALIGLQLFMGNLRQKCIRWPPINDTWAYNATGPSSYATD
GYSNTSDFNSYISNPENHYFLDGQLDPLLCGNSSDAGKCPEGYMCMKAGRNPNYGYTSYD
NFGWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMAY
AEQNEATITEAREKEEEYQRILEQLKHQEAEKHHEADEKERDDGSEQEFADDEQSLGEDG
KGLGKKTGKEDMSNGSKLSMLELDKAALQKRHSIAVSVISNQIEELEEAERPCPPGWYKF
ADIFLKWNCCQPWIIFKKWVYFVVMDPFVDLGITICIVLNTLFMAMEHFPMTEEFGNMLG
VGNLVFTGIFTAEMVLKLIAMDPYYYFQVGWNIFDSIIVTLSLVELGLADVEGLSVLRSF
RLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVC
KIAGDCELPRWHMTDFFHAFLIIFRILCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNL
VVLNLFLALLLSSFSGDNLAAPEEDGEMNNLQIAVNRINRGIAWVKAFVIGLIMRLLRKK
PKTSKDESGGDKGDANNENFALNHVDPKTGKLVKLVDGTSKIPEDVSVDGFVTGLTLTVP
IAKVESDFENQDDDTSEDENDVDATRKPGDEDVSSTCSTVDCRPDEEADVEDEPEMDDPA
ECFTEGCIRRCPCLTADITQGRGKMWWNFRRTCFTIVEHSYFETFIIFMILLSSGALAFE
DIYIEKRRVIKIILEYADQVFTYVFIVEMLLKWTAYGYKTYFTNAWCWLDFLIVDVSLIS
LTANILGFSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFW
LIFSIMGVNLFAGKFYRCINTTSGEMFEVSVVSNYSECDLLGMVTNETRWVNLKVNFDNV
GMGYLSLLQVATFKGWMDIMYAAVDSRDVYDQPEYEVNLYMYLYFVIFIIFGSFFTLNLF
IGVIIDNFNQQKSKLGGQDLFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNCVQGLVFDFI
TKQFFDIFIMVLICLNMVTMMVETDDQSQEMEDILYKINLVFIVIFTTECILKMIALRQY
FFTIGWNIFDFVVVILSVVGIMLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRT
LLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKMGGIDDMFNFETFGNSIICLF
EITTSAGWDGLLLPIMNSGPPDCDPNIENPGTDVRGDCGNPLMGIIFFSSYIIISFLVVV
NMYIAIILENFNVATEESADPLCEDDFEMFYETWEKFDPDATQYVDYSRLSEFCDTLKDP
LRIPKPNTVKLITMELPLVTGDKIHCLDILMALTAEVLGDSEEMDSLKASMEEKFMVNNP
SKLAYEPITTTLKRKQEEVAASIIQRAYRKHLLKRTVKHASFKFREKMHKTKDDEEPPEK
EGMIANAMETLYGSRAAGNLAVAKAQPLMASRDGQPVTDPKENESRGAAPVEVMSEVVLH
SAPSTIPQPAVPPNNLRESVV
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcctgctccaccacacaggcaacgatgcgttccgccgcttcaccccggagtcg
ctggcggagatcgagcggcggatggctgaggagaaggcggagcaggaggagcacaagaac
gtagaggtggccgaggaggacctgcccaagcccagaggtgacctggaggcgggcaagagc
ctgccgttcatctacggagacccaccgcccgagctgctcaacgttcccctggaggaactg
gatcctttctacaaagcacagaaaacctttattgtcatcaccaaagggaatacaatcttt
aggtttaatgctgaacctgcctgctaccttctgagccctttcagcattgttagaagagga
gccatcagagtcctcatacattcattgtttagcatgtttatcatgctaaccattctatcg
aactgtgtgttcatgacaatgagcaatcccccaccatggagtaaaactgtagagtatgtt
tttactggtatttatacctttgaggcaacgatcaaagtgctgtcccgaggcttctgtatg
ggctcatttacattccttcgagatccatggaactggctggatttcatggtgatcagcatg
gcgtacatcactgagtttgtcgacctgggcaacgtgtctgctcttcggacgttccgtgtg
ctcagagccctaaaaactatcactgtaattcccggtctgaaaaccattgtgggggccctg
atccagtcggtgaaaaagctggcggatgtgatgatcctcaccgtcttctgcctcgccgtc
ttcgccctcattgggctgcagctgttcatgggcaacctgcggcaaaagtgcatccgttgg
ccgccgatcaatgacacgtgggcctacaacgccactggcccctccagctacgctaccgat
ggctattccaacacttccgacttcaactcctacatcagcaacccagaaaaccactacttt
ttggatggacaattggatcctcttctttgtggaaacagctctgatgctggaaaatgccca
gagggctacatgtgtatgaaggctggacgaaacccaaactatggctacacaagctacgat
aacttcggctgggctttcctggctctctttcgtcttatgacacaggacttctgggagaat
ctgtttcagctgacattgcgcgctgcaggaaagacctacatgatcttcttcgtggtcatc
atattcctgggctccttctatctcatcaacctcatcctggccgtggtggccatggcctac
gcagagcagaacgaagccactattaccgaggccagggaaaaagaggaggagtaccagagg
attctagagcagctgaagcaccaggaggcagagaaacaccatgaagctgatgaaaaagag
cgggatgacggttcagagcaagagtttgccgatgatgaacagagtcttggagaggatggc
aagggtcttgggaagaaaacggggaaagaggatatgtccaatggatctaaactcagcatg
cttgaactggacaaagcagccctccagaaaagacactctattgctgttagtgtgatcagc
aatcagatcgaagagcttgaggaggctgagagaccatgtcccccagggtggtacaaattt
gccgatattttcctgaaatggaactgttgtcaaccgtggatcatcttcaaaaaatgggtg
tactttgtggtgatggacccatttgtggacctcggtattaccatctgcattgtcctgaac
accctgttcatggctatggagcactttcctatgaccgaggagtttggtaatatgctgggt
gttggaaacctggttttcactgggatcttcactgctgagatggtcctcaaactcattgcc
atggatccatactattatttccaggttgggtggaacattttcgacagcattattgtcacc
ctgagcctggtggagctgggtctggctgatgttgagggcctgtctgtgctcaggtcattc
cgtttgatgcgtgtcttcaagctggccaagtcatggccgaccctcaacatgctgatcaag
atcatcgggaactcggtgggcgccctgggaaacctcaccctggtgctggccatcatcgtc
ttcatctttgccgtggtgggcatgcagctgttcggcaagagctacaaggactgcgtgtgc
aagatcgccggggactgcgagctgccgcgctggcacatgaccgacttcttccacgccttc
ctcatcatcttccggatcctgtgcggggagtggatcgagaccatgtgggactgcatggag
gtggctggccaggccatgtgcctcattgtcttcatgatggtcatggtcataggcaatctg
gtggtacttaatctgttcctggccctgctgctgagctccttcagtggtgacaacctggcg
gcccccgaagaggatggcgagatgaacaacctgcagatcgcggtcaacaggatcaacagg
ggcatcgcctgggtcaaagccttcgtcatcgggctgataatgagactcctgagaaagaag
ccaaagacgagcaaggatgagagcggtggagacaagggcgacgccaataacgaaaatttt
gccctgaaccacgtggaccccaagacgggcaagttggtcaaactggtggatggcacatcc
aaaatcccagaggacgtctctgtcgatgggttcgtcacgggcttgaccctcactgtgccc
atcgccaaggtagagtcggatttcgaaaaccaagacgatgacacttcagaggatgaaaat
gatgttgatgccaccaggaaaccgggggatgaggatgtgtcctcgacctgcagcactgtt
gattgcagaccggatgaggaggcggacgtggaggatgagccggagatggatgacccggca
gaatgcttcactgaaggatgcatcaggcgttgtccgtgcctgacggcggacatcacgcag
ggccgcgggaagatgtggtggaacttcaggaggacctgcttcaccattgtggagcacagc
tactttgagactttcatcatcttcatgatcttgctcagcagtggagctctggcttttgag
gatatctacattgagaagcgcagagttataaaaatcattctggaatatgcagatcaagtc
ttcacatacgtgtttattgttgaaatgctcctaaaatggacagcgtatggctataagacc
tacttcaccaatgcctggtgttggctggacttccttattgttgatgtttctctcataagc
ttgacggctaatatcctgggcttctctgagctgggagccatcaaatctttgcggaccctt
agagccttgaggcctctgagggccctgtccaggtttgaggggatgagggttgtggtgaac
gctcttgttggggccatcccctccatcttcaacgtgctcctcgtctgcctcatcttctgg
ctcatcttcagcatcatgggagtcaatctgtttgctgggaagttctaccgatgcatcaac
accaccagcggtgagatgttcgaagtgtctgttgtcagcaactactcagagtgcgatctt
ctgggcatggtcaccaatgagacgcgctgggtcaatctgaaggtgaacttcgacaacgtt
ggcatgggctacctctctctactccaagtggcaacatttaaaggttggatggacatcatg
tatgcagctgtggattcacgtgacgtctatgaccagcctgagtacgaagtcaacctctat
atgtacctgtactttgttatcttcatcatctttggatccttcttcaccctcaatctattc
attggtgtgattatcgacaactttaaccagcaaaaatctaagttaggagggcaggatctc
ttcatgactgaggagcagaaaaaatactacaatgccatgaaaaaactaggctctaaaaag
ccacagaagccaattccaagacctcagaactgtgtccaaggcctggtgtttgacttcatc
acgaagcagttctttgacatcttcatcatggtgctgatttgcctcaatatggtgaccatg
atggtggagacagacgaccaaagtcaggaaatggaggatatcctgtacaaaatcaatctg
gtcttcatcgtgatcttcaccaccgagtgtatcctcaaaatgattgcactcagacaatat
ttcttcaccattggatggaatatttttgattttgtggtggtcattctctccgtagtgggt
atcatgctggcggacatcatagagaagtactttgtgtcgcctacacttttccgtgttatc
agactggccagaatcggccgtgtcctgcgtctcatcaggggagcaaaaggcatcaggaca
ctgctgttcgctctgatgatgtcacttcctgccctgttcaatataggcctgctcctcttc
ctaatcatgtttatcttctccatctttggcatgtcaaactttgcctacgtgaagaaaatg
ggcggcatcgatgacatgtttaactttgagacgttcggcaacagcataatctgcctgttt
gagatcaccacctcggcgggttgggacggcttgctccttcccatcatgaacagcggcccc
ccagactgtgaccccaatatcgagaatccaggtaccgacgtgaggggggactgtggcaac
cccctcatgggcatcatattcttcagcagctacatcatcatttccttcctggtagtggtc
aacatgtacatcgccatcatcctggagaacttcaacgtggctaccgaggagagtgccgac
ccgctgtgcgaggacgacttcgagatgttctacgagacctgggagaagtttgacccggat
gccacccagtatgtggactatagccggctgtcagagttctgtgacactttgaaggaccct
ctgaggatccccaagcccaacaccgttaagctgatcacaatggagctacccttggtcact
ggtgacaagatccactgcctggacatcctgatggctctaaccgcagaggtgctgggtgat
tcggaggagatggactccctaaaggcgagcatggaggagaagtttatggtgaacaaccct
tccaagttggcctacgagcccatcaccaccaccctgaagcgcaaacaggaggaggtggcc
gccagcatcatccagagagcctaccgcaagcacctgctgaagcgaaccgtcaagcacgcc
tccttcaagttccgcgagaaaatgcacaaaaccaaagacgatgaggagccgccagaaaaa
gagggaatgattgccaatgcaatggagaccctctatggcagcagggcagctgggaacctg
gctgttgcaaaagcccaaccattaatggcctctagggatggccagcctgtgacggaccct
aaggaaaatgagtcccgtggagctgctccggtagaagtcatgagtgaagtggtcctgcat
tctgccccgtccaccatcccccaacccgctgtacccccgaacaacctgagggagtctgtt
gtttaa
DBGET
integrated database retrieval system
