Anguilla rostrata (American eel): 135250342
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Entry
135250342 CDS
T10705
Symbol
lig4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
arot Anguilla rostrata (American eel)
Pathway
arot03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
arot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
135250342 (lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arot03400
]
135250342 (lig4)
Enzymes [BR:
arot01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
135250342 (lig4)
DNA repair and recombination proteins [BR:
arot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
135250342 (lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT_2
DNA_ligase_A_C
BRCT
RNA_ligase
C8-3_MUC4
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
135250342
NCBI-ProteinID:
XP_064182612
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All DBs
Position
3:complement(17332744..17337690)
Genome browser
AA seq
940 aa
AA seq
DB search
MVLLTEEEKKSQTTSRCKLHSILDSWVSPVKMAAALDTKSGSEGSVAAEVPFHHLCTTLE
KIQKAKLRPDKTKCLRDFLDSWRKFHAALHKDNPNTTDSFYPAMRLIVPSFERERMAYGI
KENMLAKLYIDVLGLPKNGPEAHKLLNYRAPTTSQGEAGDFALMAYFVLKKRCTSQGNLT
IKEVNDFLDSVALNNASKQKDLVKKNLLHLITQSSALEQKWLIRMILKDMKLGMSKETVL
HVFHRDAAELYNVTTDLDKVCRQLHDPSVSLSEVSIGLFSAFRPMLAAVANVKQVEKQMN
NRSFFIETKLDGERIQVHKDGDVYKYFTRNSYEYTQQFGASPLQGSLTPFIHNIFKPHVR
NCILDGEMMAYNLTVDAFIQKGTKFDIKRLVDDSELQTCFCVFDVLLLNDQKLGNETLKK
RDEMLQTVFTPIKGRMQLVQKTEAKTMQEVVDALNEAIDNREEGIMVKDPLSIYKPDKRG
EGWLKLKPEYMDGLMDELDLLIIGGYWGKGRRGGMMSHFLCAVAETPEPGEKPSVFHSFC
RIGSGYTMKELYDLGLKLAKHWKVYRKNDPPASILCTTEKPEVYIEPWDSVIIQVKAAEI
VDSDMYKTNCSLRFPRIERMREDKEWHQCMTLADLEQYRSKSSGKLASRHLLLNDDEPQK
KKRKLVAKPKKAIGIIDHFKAQDLSGVAKETDMFEDVEFCVLNGNDEHSKADLEKGVASC
GGIVVQNPGKDTYCVIAAVENMRVKNLIAADQHDVVWATWLLECLERKQVVPWQPRHMIH
MSPPTKEHFAKEYDQFGDSYSANTDEQQLKEVFGRIRMKEEDLPSIADVEARYGLDDLPT
SMFRPFRVYMDRCSDIGDPKSYIPSTCLDTRALEFRFHGGTVESTLVEGVSHVIVAEETR
IMPLRTLRRVFTKKFKIVGETWVKDCIKAGHLLNDNDYLV
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggttttgttaactgaagaggaaaagaagtcacagaccacttccagatgtaagttgcat
tcgattctagacagctgggtgtcacctgtcaaaatggcagcagcactggacaccaaatca
ggatctgaaggctctgttgctgctgaagtaccctttcatcatttgtgcaccactttggaa
aaaatacaaaaggccaaactcagaccagataaaactaagtgtctgagagacttcctggat
tcctggagaaagttccatgctgctctccacaaagataacccaaacaccacagactcattt
tacccagctatgcgtctcatagttccctcgtttgagcgagagaggatggcctatggcata
aaggaaaacatgctggctaaactctacatcgatgttttgggtcttccgaagaacggtcct
gaagcacataaacttctcaattaccgcgctcctactacatcgcaaggagaagctggggat
tttgcccttatggcctactttgttttgaagaaaaggtgcacaagtcaggggaatctaacc
attaaagaggtgaacgacttcttggactcggttgctctgaataacgcaagtaagcagaag
gatttggtgaaaaagaacctgttgcacctgatcacccagagctcagccctggagcagaag
tggctgatccgcatgattctgaaagacatgaagcttgggatgagcaaagagacggtcctg
catgtcttccaccgcgacgcggccgagctctacaacgtcaccacggacctggacaaagtg
tgccggcagctccatgacccctctgtgtccctcagcgaggtgtccatcgggctcttctcg
gctttcaggcctatgctggcagcagtcgccaacgtgaaacaggtggagaagcagatgaac
aaccggagcttcttcatcgagaccaagctggacggcgagcgcatccaggtgcacaaggac
ggggatgtgtacaagtattttacacgcaactcctatgagtacacacagcagttcggggcc
tcgccattacagggttctctgacgcccttcattcacaatatcttcaagccccatgtgagg
aactgcatcttggatggtgagatgatggcatacaacctcactgttgatgccttcatacag
aaaggcacaaagtttgacattaagaggttagttgatgactctgaactgcagacctgtttc
tgtgtctttgatgtcttgctactcaatgaccagaagttgggaaatgaaactctgaagaag
cgggacgagatgcttcagacggtcttcaccccgataaagggccggatgcagctggtgcag
aaaaccgaagccaaaacaatgcaggaagtggtggacgccctcaatgaagcgattgacaac
cgggaagaaggaatcatggtgaaggacccactgtccatctacaagccagacaaacgaggg
gagggttggctgaagctcaagccagagtatatggacggcctgatggacgaacttgacttg
ctgatcatcggggggtactggggaaaaggcaggcggggtgggatgatgtcccacttcctg
tgtgcagttgctgagactcctgaacctggagagaagccatcggtgttccattctttttgc
cgtattggttcaggttacactatgaaggagctttacgacctgggcttgaaactggccaag
cactggaaagtctaccgtaagaatgatcccccagcatcgatcctttgtactacagagaaa
ccagaggtgtacattgaaccctgggattctgtgatcattcaggttaaagcagccgaaata
gtcgacagtgacatgtataagacaaattgctcgcttcgatttcccaggatcgagaggatg
agggaggataaggaatggcatcagtgcatgactttagcggacctggagcagtacagaagc
aagtcttccgggaagttagcatcgagacaccttcttctcaatgatgacgagccacagaag
aagaagcggaagctagtggcaaagcctaagaaagccatcgggataatagaccattttaag
gcacaggacctgtctggtgtggcgaaagagactgacatgtttgaggatgtggagttctgc
gtattgaatgggaatgatgagcactccaaggccgatctggagaagggggtagccagttgt
ggaggcatcgtagtccagaacccaggcaaggacacctactgcgtgatagctgctgtggag
aacatgagggtgaagaacctgattgccgccgaccagcatgacgtggtgtgggccacctgg
ctgcttgagtgcctggagaggaagcaggtggttccgtggcaaccccgtcacatgatccat
atgtctccacccacaaaggaacactttgccaaggagtacgaccagttcggggacagctac
tcggctaacacggatgagcagcagttgaaagaggtctttgggaggatccgcatgaaggag
gaagacttgccttccatcgcagatgtagaagcaaggtacggcctggatgaccttcccaca
agcatgttcagacccttcagagtgtacatggaccgttgctctgacattggggacccgaag
agctatatcccttcaacatgtttggacacacgggcgctggagttccgtttccacgggggg
acagtggagtccacgctggtggaaggggtgtctcatgtcattgttgctgaggaaaccaga
atcatgccattaagaactctcagaagagtctttaccaagaagtttaagattgtgggagaa
acctgggtgaaggactgtatcaaagctggacatttgttgaatgataatgactaccttgtt
tag
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