KEGG   Anguilla rostrata (American eel): 135250342
Entry
135250342         CDS       T10705                                 
Symbol
lig4
Name
(RefSeq) DNA ligase 4 isoform X1
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
arot  Anguilla rostrata (American eel)
Pathway
arot03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:arot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    135250342 (lig4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:arot03400]
    135250342 (lig4)
Enzymes [BR:arot01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     135250342 (lig4)
DNA repair and recombination proteins [BR:arot03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     135250342 (lig4)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_IV BRCT_2 DNA_ligase_A_C BRCT RNA_ligase C8-3_MUC4 mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 135250342
NCBI-ProteinID: XP_064182612
LinkDB
Position
3:complement(17332744..17337690)
AA seq 940 aa
MVLLTEEEKKSQTTSRCKLHSILDSWVSPVKMAAALDTKSGSEGSVAAEVPFHHLCTTLE
KIQKAKLRPDKTKCLRDFLDSWRKFHAALHKDNPNTTDSFYPAMRLIVPSFERERMAYGI
KENMLAKLYIDVLGLPKNGPEAHKLLNYRAPTTSQGEAGDFALMAYFVLKKRCTSQGNLT
IKEVNDFLDSVALNNASKQKDLVKKNLLHLITQSSALEQKWLIRMILKDMKLGMSKETVL
HVFHRDAAELYNVTTDLDKVCRQLHDPSVSLSEVSIGLFSAFRPMLAAVANVKQVEKQMN
NRSFFIETKLDGERIQVHKDGDVYKYFTRNSYEYTQQFGASPLQGSLTPFIHNIFKPHVR
NCILDGEMMAYNLTVDAFIQKGTKFDIKRLVDDSELQTCFCVFDVLLLNDQKLGNETLKK
RDEMLQTVFTPIKGRMQLVQKTEAKTMQEVVDALNEAIDNREEGIMVKDPLSIYKPDKRG
EGWLKLKPEYMDGLMDELDLLIIGGYWGKGRRGGMMSHFLCAVAETPEPGEKPSVFHSFC
RIGSGYTMKELYDLGLKLAKHWKVYRKNDPPASILCTTEKPEVYIEPWDSVIIQVKAAEI
VDSDMYKTNCSLRFPRIERMREDKEWHQCMTLADLEQYRSKSSGKLASRHLLLNDDEPQK
KKRKLVAKPKKAIGIIDHFKAQDLSGVAKETDMFEDVEFCVLNGNDEHSKADLEKGVASC
GGIVVQNPGKDTYCVIAAVENMRVKNLIAADQHDVVWATWLLECLERKQVVPWQPRHMIH
MSPPTKEHFAKEYDQFGDSYSANTDEQQLKEVFGRIRMKEEDLPSIADVEARYGLDDLPT
SMFRPFRVYMDRCSDIGDPKSYIPSTCLDTRALEFRFHGGTVESTLVEGVSHVIVAEETR
IMPLRTLRRVFTKKFKIVGETWVKDCIKAGHLLNDNDYLV
NT seq 2823 nt   +upstreamnt  +downstreamnt
atggttttgttaactgaagaggaaaagaagtcacagaccacttccagatgtaagttgcat
tcgattctagacagctgggtgtcacctgtcaaaatggcagcagcactggacaccaaatca
ggatctgaaggctctgttgctgctgaagtaccctttcatcatttgtgcaccactttggaa
aaaatacaaaaggccaaactcagaccagataaaactaagtgtctgagagacttcctggat
tcctggagaaagttccatgctgctctccacaaagataacccaaacaccacagactcattt
tacccagctatgcgtctcatagttccctcgtttgagcgagagaggatggcctatggcata
aaggaaaacatgctggctaaactctacatcgatgttttgggtcttccgaagaacggtcct
gaagcacataaacttctcaattaccgcgctcctactacatcgcaaggagaagctggggat
tttgcccttatggcctactttgttttgaagaaaaggtgcacaagtcaggggaatctaacc
attaaagaggtgaacgacttcttggactcggttgctctgaataacgcaagtaagcagaag
gatttggtgaaaaagaacctgttgcacctgatcacccagagctcagccctggagcagaag
tggctgatccgcatgattctgaaagacatgaagcttgggatgagcaaagagacggtcctg
catgtcttccaccgcgacgcggccgagctctacaacgtcaccacggacctggacaaagtg
tgccggcagctccatgacccctctgtgtccctcagcgaggtgtccatcgggctcttctcg
gctttcaggcctatgctggcagcagtcgccaacgtgaaacaggtggagaagcagatgaac
aaccggagcttcttcatcgagaccaagctggacggcgagcgcatccaggtgcacaaggac
ggggatgtgtacaagtattttacacgcaactcctatgagtacacacagcagttcggggcc
tcgccattacagggttctctgacgcccttcattcacaatatcttcaagccccatgtgagg
aactgcatcttggatggtgagatgatggcatacaacctcactgttgatgccttcatacag
aaaggcacaaagtttgacattaagaggttagttgatgactctgaactgcagacctgtttc
tgtgtctttgatgtcttgctactcaatgaccagaagttgggaaatgaaactctgaagaag
cgggacgagatgcttcagacggtcttcaccccgataaagggccggatgcagctggtgcag
aaaaccgaagccaaaacaatgcaggaagtggtggacgccctcaatgaagcgattgacaac
cgggaagaaggaatcatggtgaaggacccactgtccatctacaagccagacaaacgaggg
gagggttggctgaagctcaagccagagtatatggacggcctgatggacgaacttgacttg
ctgatcatcggggggtactggggaaaaggcaggcggggtgggatgatgtcccacttcctg
tgtgcagttgctgagactcctgaacctggagagaagccatcggtgttccattctttttgc
cgtattggttcaggttacactatgaaggagctttacgacctgggcttgaaactggccaag
cactggaaagtctaccgtaagaatgatcccccagcatcgatcctttgtactacagagaaa
ccagaggtgtacattgaaccctgggattctgtgatcattcaggttaaagcagccgaaata
gtcgacagtgacatgtataagacaaattgctcgcttcgatttcccaggatcgagaggatg
agggaggataaggaatggcatcagtgcatgactttagcggacctggagcagtacagaagc
aagtcttccgggaagttagcatcgagacaccttcttctcaatgatgacgagccacagaag
aagaagcggaagctagtggcaaagcctaagaaagccatcgggataatagaccattttaag
gcacaggacctgtctggtgtggcgaaagagactgacatgtttgaggatgtggagttctgc
gtattgaatgggaatgatgagcactccaaggccgatctggagaagggggtagccagttgt
ggaggcatcgtagtccagaacccaggcaaggacacctactgcgtgatagctgctgtggag
aacatgagggtgaagaacctgattgccgccgaccagcatgacgtggtgtgggccacctgg
ctgcttgagtgcctggagaggaagcaggtggttccgtggcaaccccgtcacatgatccat
atgtctccacccacaaaggaacactttgccaaggagtacgaccagttcggggacagctac
tcggctaacacggatgagcagcagttgaaagaggtctttgggaggatccgcatgaaggag
gaagacttgccttccatcgcagatgtagaagcaaggtacggcctggatgaccttcccaca
agcatgttcagacccttcagagtgtacatggaccgttgctctgacattggggacccgaag
agctatatcccttcaacatgtttggacacacgggcgctggagttccgtttccacgggggg
acagtggagtccacgctggtggaaggggtgtctcatgtcattgttgctgaggaaaccaga
atcatgccattaagaactctcagaagagtctttaccaagaagtttaagattgtgggagaa
acctgggtgaaggactgtatcaaagctggacatttgttgaatgataatgactaccttgtt
tag

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