Anguilla rostrata (American eel): 135254554
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Entry
135254554 CDS
T10705
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
arot Anguilla rostrata (American eel)
Pathway
arot04140
Autophagy - animal
Brite
Membrane trafficking [BR:
arot04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
135254554 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
135254554
NCBI-ProteinID:
XP_064190882
LinkDB
All DBs
Position
5:6976419..6986839
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AA seq
462 aa
AA seq
DB search
MSSGCPPQSPAVAKTEVVVEGESPLLAATFAYWDNILGPRVRHIWAPKTERPLLLSDGEI
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSLILPQT
QLAFYLPLHAVCVERLKHIIRKGRIWMKMGCSIVSVLTSEIVPIMELLSSMKTHSVPEDI
DIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSMVVGSNPEKVNKIVRTLCLFLTPAE
RKCSRLCRAESSFRYDTGLFVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDVNTVTQMP
PCHEHTYNQRRYMRSELGVLWKAASEEDAGPDTVARADDTFTPDLNVFQDVMHRDTLVKS
FLDEVFLLKPGLGLRSTFLAQFLLLLHRRALTLLKYIEDETQKGKKPFRSLRSLKTDLDL
TEEGDLSIVMAMAEKLKAGLHSFVFGKSFYTSVQERDVLMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgggtgccctccgcagtcccccgccgtggcgaagacggaggtggtggtggag
ggcgagtcccccctgctggccgccaccttcgcctactgggacaacatcctgggcccccgc
gtgcgtcacatctgggcccccaagacggagaggcccctcctcctgagcgacggcgagatc
accttcctggccaatcacacgctgaacggcgagatcctgcgcagcgccgagtgcggcgcc
gtcgacgtcaagttcttcgtgctggcggagaagggcgtgatcatcgtgtcgctcatcttc
gacggcgagctgaagggcgacaagaacacgtgcgccctgtcgctgatcctgccgcagacg
cagctggccttctacctgccgctgcacgccgtctgcgtggagcggctcaagcacatcatc
cgcaagggccgcatctggatgaagatgggctgcagcatcgtctcggtcctgacctcggag
atcgtgcccatcatggagctgctgtcctccatgaagacccacagcgtcccggaggacatc
gatattaaggacaccgtgctgaatgacgacgacatcggggacagctgccacgaagacttt
ctgcacaaggccatcagctctcatctgcagacctgtggctgttctatggttgtggggagc
aaccccgaaaaagtcaacaagatcgttcggaccctgtgcctctttctcacgcctgccgag
cgcaaatgttcccgcctgtgccgggccgagtcgtctttccgctacgacaccggcctcttc
gtccagggcctgctgaaggactcgacgggcagcttcgtgctgcccttccggcaggtgctg
tactcgccgtaccccaccacgcacatcgacgtggacgtgaacacggtgacgcagatgccg
ccgtgccacgagcacacgtacaaccagcgccgctacatgcgctcggagctgggcgtcctc
tggaaggccgccagcgaggaggacgcggggcccgacaccgtcgcccgcgccgacgacacc
ttcacccccgacctaaacgtgttccaggatgtcatgcacagagacactctggtcaaatcc
ttcctggatgaggtgttcctgctgaagccaggcctgggcctccgcagcaccttcctggcg
cagttcctcctgcttctccaccggagggcgctcaccctgctcaaatacattgaagatgag
acgcagaaggggaagaagccgtttcgctcgctgcgcagcctgaagacggacctggacctg
acggaggagggcgatctcagcatcgtcatggcgatggccgagaagctgaaggccggcctg
cactctttcgtcttcgggaagtccttctacaccagcgtgcaggagcgcgacgtcctcatg
agcttctga
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