Anguilla rostrata (American eel): 135257177 Help Entry 135257177         CDS       T10705                                  Symbol thbs1b Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism arot  Anguilla rostrata (American eel) Pathway arot04115   p53 signaling pathway arot04145   Phagosome arot04148   Efferocytosis arot04350   TGF-beta signaling pathway arot04510   Focal adhesion arot04512   ECM-receptor interaction arot04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:arot00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     135257177 (thbs1b)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     135257177 (thbs1b)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     135257177 (thbs1b)    04148 Efferocytosis     135257177 (thbs1b)   09143 Cell growth and death    04115 p53 signaling pathway     135257177 (thbs1b)   09144 Cellular community - eukaryotes    04510 Focal adhesion     135257177 (thbs1b)   09142 Cell motility    04820 Cytoskeleton in muscle cells     135257177 (thbs1b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:arot04131]     135257177 (thbs1b)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:arot00536]     135257177 (thbs1b) Membrane trafficking [BR:arot04131]  Endocytosis   Phagocytosis    Opsonins     135257177 (thbs1b) Glycosaminoglycan binding proteins [BR:arot00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    135257177 (thbs1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 Laminin_G_3 TSP1_ADAMTS cEGF TSP1_CCN EGF Laminin_G_2 Laminin_G_1 Motif Other DBs NCBI-GeneID:  135257177 NCBI-ProteinID:  XP_064195727 LinkDB All DBs Position 6:complement(40524455..40536662) Genome browser AA seq 1171 aa AA seqDB search MKLTGIFLLLMLWHADGARVAESRDDNSVYDLFELVQVNKKSHGVSLVKGEDPYSPAYKI LNPDLIPPVPETPFRDLIDSIHSERGFLLLANFKQFKRTRGSILTIEKQDGSGPIFEIVS NGKANTLDVVYSTENKQQVVSIEEADLATGHWKNITLFVQEERAQLYVGCEEINTAEMDL PINRILTQEVPGTARLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQSSTLTDTI ILDIPVNGSSPAIRTDYIGHKTKDLMTVCGFTCEDLASMFKELKGLGVIVKQLSNELRKV TEDNNLIRDQIGIRTGVCLHNGIVHQNKDEWTVDDCTECTCQNSATVCRKISCPLIPCAN ATVTDGECCPRCGALSDYAEDGWSPWSEWTPCSVTCGRGVQQRGRSCDRINNNCEGTSVQ TRDCYLQECDKRFKQDGGWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQMGGKNCQGEGR QTEKCQKSPCPINGNWGPWSPWDTCTVTCGGGVQARKRLCNDPPPKYGGKDCVGNAKATQ LCNKKDCPVDGCLSNPCFPGAKCTSFPNGSWKCGACPTGYKGNGIKCKDIDECKEVPDAC FIFNGVHRCENTDPGYNCLPCPPRYSGPQPFGKGVEEATANKQVCTPRNPCVDGSHDCNK NARCNYLGHFADPMFRCECKPGYAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCP NLPNSGQEDYDKDGIGDACDDDDDNDGIPDDRDNCQFIFNPRQYDYDRDDVGDRCDNCPY NSNPDQTDTDHNGEGDACAVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDQCDNCPLE HNPDQLDSDSDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDD NDGIPDDKDNCRLAFNPDQLDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRK FQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTDRD DDYAGFVFGYQSSARFYVVMWKQITQTYWSNTPTRAQGYSGLSIKVVNSTTGPGEHLRNA LWHTGNTPGQVRTLWHDPKNVGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMADSGSIY DKTYAGGRLGLFVFSQEMVYFSDLKYECRDV NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgaagttgacggggatatttttgctgttgatgctgtggcacgccgatggagccagggtg gcagagagccgagacgacaacagtgtgtacgacctatttgagctagtgcaagttaataag aagagccatggcgtgagtctggtgaaaggagaagacccgtacagtcccgcttacaaaatc ctgaacccggaccttattcccccagtccccgagacccccttcagggacctcattgattcc atccattcagagcgcggatttcttctcttggccaacttcaagcagttcaagcggaccaga ggcagtatcttgactattgagaagcaggacgggtccggacccatattcgaaatagtatca aacggcaaggcgaacactctggacgtggtatactccacagagaataagcaacaggtggta tccatcgaggaagcggacttagcaaccgggcactggaagaacatcacgctgttcgtgcag gaggaacgagctcagctgtacgtgggatgtgaagaaataaacacagccgagatggacctg cccatcaacagaatcttgacccaggaggttccgggcactgcacgtctgcggattggcaag ggagcggtcaaagacagatttatgggggtacttcaaaatgtgcgctttgtttttggaact actttggacgcgattttacggaacaaaggatgccaaagctccactttgacagataccatc atcttggatatcccagtcaatgggtccagcccagccatcaggactgattacattggtcat aaaaccaaagatctgatgacggtttgcgggtttacctgcgaagatctggccagtatgttt aaggaactcaaggggcttggcgtgatcgtgaaacagctgtccaacgagctccgaaaagtg actgaagacaacaacctgatcagggaccagatcggaatccgcactggcgtgtgcctgcac aacggcatcgtacaccagaacaaggacgagtggacggtggacgactgcaccgagtgcaca tgccagaactccgccaccgtgtgtcgcaagatctcctgccctctgatcccctgtgccaac gccaccgtgaccgacggcgagtgctgcccgcgatgcggagccttgagcgactacgcggag gacggctggtccccgtggtctgagtggaccccctgctccgtgacctgcggtcgaggtgtc caacagcgcggtcgatcctgcgaccgcatcaacaacaactgcgaggggacgtctgtgcag acgcgcgactgctacctgcaggaatgtgacaagcgcttcaaacaggatggtgggtggagc cactggtctccctggtcctcctgctcggtcacctgcggcgctggcgtcatcaccaggatc cgcctctgcaactcgcccacgccccagatgggcggaaagaactgccagggcgaaggccga caaaccgagaagtgccaaaaatcgccctgccccatcaacggcaactggggaccctggtct ccgtgggacacctgtactgtcacctgcgggggtggggtgcaggctcgcaagcggctctgt aatgacccccctcccaaatacggcggcaaagactgcgtgggcaatgccaaagccacccag ctgtgcaacaagaaggattgtcctgttgatggctgtctgtctaacccctgcttccctgga gccaagtgcaccagcttccccaatgggtcctggaagtgcggagcctgtcctacgggctac aagggcaatggcatcaagtgcaaggacattgatgagtgtaaagaggttccagatgcgtgc ttcatatttaacggggtccaccgatgcgaaaacacagatcctggatacaactgcctgccc tgccccccacgttactctggaccccaacccttcggcaagggggttgaggaggccactgcc aataagcaggtctgcacaccgcggaacccgtgcgtggatggaagtcacgactgcaacaag aacgcccgctgcaactacctgggccactttgcagaccccatgttccggtgtgagtgcaaa ccaggctacgccgggaacgggcacatctgcggcgaggacaccgacctggacggctggccc aacgccgatctggtgtgcgtggagaacgccacctaccattgcaagaaggacaactgcccc aacctgcccaactccggccaggaagactacgacaaggacgggatcggtgatgcctgcgat gacgacgatgacaacgacggaatccccgacgacagggacaactgccagttcatcttcaac cccagacagtacgactatgaccgcgacgacgttggcgatcgctgtgacaattgcccgtat aacagcaaccctgaccagaccgacaccgatcacaatggcgaaggcgacgcttgtgccgtg gacatcgatggagatggcattctgaacgagaaagataattgcccctatgtctacaatgtg gaccaaagagacacagatctggatggtgttggggaccagtgtgacaactgcccccttgag cacaatcctgaccagctggactctgactctgatcgtgtgggagacaagtgtgacagtaac caggacatcgatgaggacggccaccagaacaacttggacaactgcccttacatccctaat gccaaccaagccgaccatgacaaggacggcaagggagacgcctgtgaccacgacgatgac aacgatggaatccctgacgacaaagacaactgcaggctggccttcaacccagaccagctg gactctgatggtgatgggcgtggtgatgcttgcaaggacgactttgaccaggacaacgtt cccgacatctacgatgtgtgccctgagaactttgacatcagcgagacggacttccgcaag ttccagatggtgccgctcgaccccaagggcacatcccagatcgaccccaactgggtggta cggcaccagggcaaagagctggtgcagaccgtcaactgtgaccctggcatcgctgttggt tttgatgagttcaattcggtagacttcagtggaacgttcttcataaacacggaccgagac gatgactatgcaggctttgtattcgggtaccagtccagtgctcgtttttatgtggtgatg tggaagcagatcactcagacgtactggtccaacacacccacccgggcccagggatactct gggctgtccatcaaggtggtcaactcaaccacaggccctggggagcacctgaggaatgcg ctttggcacaccggcaacaccccaggacaggttcgcacactgtggcacgaccccaagaac gtgggctggaaggacttcactgcctacaggtggcacctgattcacaggcccaggaccgga cacatcagagtggtaatgtacgagggcaaaaagatcatggcggattccggaagcatctat gacaagacgtacgcgggtggaaggctaggcctcttcgtcttttcccaggagatggtgtac ttctcagacctcaaatatgaatgcagagatgtataa

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