KEGG   Anguilla rostrata (American eel): 135258962
Entry
135258962         CDS       T10705                                 
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
arot  Anguilla rostrata (American eel)
Pathway
arot04115  p53 signaling pathway
arot04210  Apoptosis
arot05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:arot00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    135258962 (apaf1)
   04115 p53 signaling pathway
    135258962 (apaf1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    135258962 (apaf1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 APAF1_C Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd EIF3I WDR55 WHD_APAF1 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 NB-ARC WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st CARD WDR90_beta-prop_4th NBCH_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_WDR35_TULP_N RMC1_N Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_HPS5 Ge1_WD40 eIF2A Beta-prop_NWD2_C Beta-prop_SCAP Beta-prop_Nup120_160 PEP5_VPS11_N CARD_2 AAA_16 Beta-prop_SPT8 WDR54 PQQ_2 NACHT NPHP3_N nSTAND6
Other DBs
NCBI-GeneID: 135258962
NCBI-ProteinID: XP_064198777
LinkDB
Position
7:complement(9976530..10017824)
AA seq 1296 aa
MEEQARSCLLTLRPLLEQDIKASYLMDHMVSDGALTVDEEEKIRSRPTRREQATALLELI
LRKDNRAYISFYNALIRESYGDLASSLQGSLPLTSPEGEKSFADGGTPYVHTVLREGGVP
QRPVVFVSRPAQLNRIRQKLYKLQETAGGWVTVHGMAGSGKSVLAAEAVRHEALIKDCFP
GGVHWLSVGQVDKAGLLVKIQSLCFRLEQVQDCEESRRPRGSVEEAKERLRFLMLRRYPR
SLLILDDVWDSAVLRAFDIQCRVLLTTRDRSLPDSVSGQKFEVMVESGLEEDKALEILAL
FVNRKQKLPEQARSIVKECKGSPLVVSLIGALLREFPDRWDYYLQKLQRKQFKRIRKSSS
YDYEALDQAMAASLQVLPHEHQELYRDLTVLEKDVKIPAKVLSVLWDLEPEEVEDVLQEF
VNKSLLFRDCNRRPYLYYLHDLQVDFLTELNRSCIQELHTKVVRQYQQHYREGPPTSRDE
ECLYWMRYLPYHMSHANLTQELCSLMFSLDWVRIKAEVMGAAHLINDYVEYGPVLDRENS
GVRGEFQEFLSLNGHQLDRRPLPDVVQLGLSQPGSSEVYRQALLQAQATRGALYLDWTNK
SRLENLSRLVVQPQQGPIFYACFSQDGHKIASCGSGSTVQVFKTTSGEKILEVEAHDDEV
LCCAFSPDDKFLATCSSDKKVKIWNAQRGTLIRVFEEEYEEQVNHCQFTNTRRRILLATC
SNDPFVNTKLWNVNKPSSQNTMFGHTEPVNHCCFSPDDTYLSTSSSDGTLRLWEVSTANE
WKSINVQSFFPEQAEETGVPVKCSAWSADGKRIICAARNVVFVFDVETAEFLSEIRTSSL
STVQFCDTCPNSQLVALALSHYTVELWDFMSNKKVAEFSGHLSWVRCVRFSPDGSLVLSS
SDDQTVRLWDTKGVHISSAASLKRDCDVLFNQDDVIVVAADNRNHVQVQNGRTGEVMFRS
EKQESRVRCMCLCREPLAAVLGCEDGTVKAGRMSARQVLRSISCWALEILNPNWGFIMAL
GLETGRVQVLEVPSGKLLCALSGHTKTVLHCQFSADGHTLITSSEDATIRVWKWRTGECM
VLKGHTERVRKFFLLEEASPSPPRLLSWSFDGTAKVWNVASGEKIQDVACHQGAVLSCDV
SPDRRMFSTVSADTTAKIWSCESWSLLHELNGHQDCVRSCRFSWDGKRLATGDDNGEIRL
WSALDGSLLRICSPGNKDSLDSLHGGWVTDLHFSPDSRTLVSTGGYIKWWDLETGEALQT
FYTTGTNLKGIHVSPDFKTFVTIDTIGILYVLRKVD
NT seq 3891 nt   +upstreamnt  +downstreamnt
atggaggaacaggcacggagctgtctcctgacactgcggcccctgctggagcaggacatc
aaggcctcctacctcatggatcacatggtcagcgatggcgcgctgactgtggatgaagag
gagaaaatcaggagcaggcccaccagaagggagcaagcgacggccttgctggagctgatt
ctgaggaaggacaaccgggcctacatttccttctacaatgctctgattcgggagagctac
ggggacctggcgtcctcgctgcagggtagcctgcctctcacgtcgcccgagggggagaag
agctttgcggacggggggacgccgtacgtccacaccgtgctcagggaaggcggggtcccc
cagcggcccgtggtgtttgtcagccggccggctcagctgaaccggatccggcagaagctg
tacaagctgcaggagacggcggggggctgggtcaccgtgcacggcatggccgggtccggc
aagtccgttctggcagccgaggccgtgaggcacgaggccctcatcaaagactgtttcccg
ggaggggtgcattggctgtctgtggggcaggtggacaaggcggggcttctggtgaagatc
cagagcctgtgcttccggctggagcaggtccaggactgcgaggagagcaggaggccccgc
ggctcggtcgaggaggccaaggagcgcctgcgcttcctcatgctccgccggtaccccagg
tcgctcctgatcctggatgacgtgtgggacagtgcggtgctccgggcgtttgacatccag
tgccgggtcctgctgaccacgcgggaccggagcctgccggattcggtcagcggtcagaag
tttgaggtgatggtggagagcgggctggaggaggacaaggctctggagatcctggcgctc
tttgtgaacaggaagcagaagctgcctgagcaggctcgcagcatcgtcaaggaatgcaag
gggtcccccctggtggtgtccctgatcggggccctgctgcgggagttcccggaccgctgg
gactactacctgcagaagctccagcgcaagcagttcaagcgcatccgcaagtcctcctcc
tatgactacgaggccctggaccaggccatggccgccagcctccaggtgctgccgcacgag
caccaggagctctacagggacctcactgtgctggagaaggacgtcaagattcccgccaaa
gtgctgtctgtcctctgggacctggagccagaggaggtggaggacgtgctgcaggagttt
gtaaacaaatctctcctgttccgcgactgcaacaggaggccttacctgtactacctgcac
gacctgcaggtggacttcctgaccgagctgaaccgctcctgcatacaggagctccacacc
aaggttgtgcgtcagtatcagcagcactacagggagggcccgcccacctccagggacgaa
gagtgcctctactggatgagatacctgccctaccacatgagccatgctaacctcacacag
gagctgtgctccctcatgttctccctggattgggtcagaatcaaggcggaggtcatggga
gccgcccacctgatcaacgactacgtggagtacggccccgtgctggacagagagaacagc
ggcgtgcgcggggagttccaggagttcctctctctgaacggacaccagctggaccgccgg
cccctcccggacgtggtgcagctgggcctgtcccagcccggctcctcggaggtgtaccgg
caggccctgctgcaggcgcaggccactaggggggcgctctacctggactggacaaataag
agcagactggagaatttgtctcgcttggtggtgcagcctcagcagggacccatcttctac
gcctgcttctcccaggatgggcacaagatcgcctcctgtgggtccggcagcaccgtgcag
gtctttaagaccacctcaggagagaagattctggaagttgaggcccacgatgacgaagtt
ctgtgctgcgccttctctcccgatgacaaattcctggccacctgctccagcgacaagaag
gttaagatttggaacgcgcagcggggcacgctgatccgggtgtttgaggaggagtacgag
gagcaggtgaaccactgccagttcaccaacacccgccggcgcatcctcctggccacctgc
tccaacgaccccttcgtgaacaccaagctgtggaacgtgaacaagccgtcctctcagaac
accatgtttggacacacggagcccgtgaaccactgctgcttctcgcccgatgacacgtac
ctgtccacctcctccagcgacgggacgctgaggctgtgggaggtctccactgcgaacgag
tggaagtccatcaacgtgcagagcttcttcccagagcaggcggaggaaacgggcgtgccg
gtgaagtgcagcgcctggtcagccgacgggaagcgcatcatctgcgctgccaggaacgtg
gtctttgtgtttgacgtggagacggcggagttcctgtcggagattcggacgagttccctg
agcacggtgcagttctgcgacacctgccctaacagccagctggtcgctctcgcgctgtcc
cactacaccgtggagctgtgggatttcatgtccaacaagaaggtggctgagttcagcggg
cacctgagctgggtccgctgcgtccgattctcccccgatggatcgctcgtgctttcctcc
tccgatgaccagacagtgaggctatgggacacaaagggagtccacatctcctctgctgcc
tctctgaagagggactgcgatgtgctcttcaatcaggatgatgtcatagtggttgccgct
gacaacagaaaccatgtgcaggtgcagaatggtaggacaggggaggtgatgttccggtcc
gaaaagcaggaatctcgggtccgctgcatgtgcctctgtcgggaaccgctcgccgctgtt
ctgggatgtgaggacggaactgtaaaggcagggaggatgagcgctaggcaggtcctgagg
agcatcagctgctgggccctggagattctgaacccaaactgggggttcatcatggcacta
ggactagagacaggcagggtacaggtgctggaggtgccctcagggaagctcctgtgcgcc
ctctctggtcacacaaagacagtgcttcactgtcagttcagtgctgatggacacacactt
atcacatcatctgaggatgcaaccatcagggtgtggaagtggaggaccggggagtgcatg
gtgctgaagggtcacaccgagcgagtgaggaagttctttcttttggaagaagcgtccccc
tctccccctcggctcctgtcctggtccttcgatggcacggccaaggtgtggaacgtggcg
agcggggagaagattcaggacgtggcctgccaccagggagccgtcctgtcgtgtgacgtg
tcccccgaccgacggatgttctccaccgtgtcggcagacacgaccgcgaagatctggagc
tgcgagtcctggtccctcctccacgagctgaacggacaccaggactgcgtccgcagctgc
cgcttctcctgggacggcaagcgtctggcgaccggcgacgacaacggcgagatccgactc
tggagcgccctggacggttcgctgctgcgcatctgttcccctggcaacaaggactccctg
gactccctgcatgggggctgggtgaccgacctgcacttttccccagacagccgaacgctg
gtgtccaccggcggctacatcaagtggtgggacctggagaccggggaggccttgcagacg
ttctacaccacgggaaccaatctgaaggggattcacgtgtcacctgacttcaagaccttc
gtcaccatcgacaccatcggaatcctgtacgtcctgagaaaggtggattga

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