Apteryx rowi (Okarito brown kiwi): 112964692
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Entry
112964692 CDS
T07573
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04517
IgSF CAM signaling
arow04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112964692 (RAPGEF6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112964692 (RAPGEF6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RA
RasGEF_N
PDZ
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112964692
NCBI-ProteinID:
XP_025918899
Ensembl:
ENSARWG00000001939
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search
MTSPVEPKIKQALRKKPSERTQEDLNTIYSFLHGLDILSHFREHQLRIMSSSACYERYKG
NQVLFCSETIARCWYILLSGSVLMKDSMFLPPCSFGKQSGGKRGCECIILEPSEMIVVEN
SKDNEENILQREVPLRQSRRRFRKINQRGERQTITDHVDSNSYLPLPADLTKMHLTDSPH
PQVTHVPSSQSGCSIASDSGSSSLSDIYQATESEMGDVDLTGLPEAPVDSEDEEEEEDED
IDRTSDPLLGRDVVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIF
EVVEQAGAIILEDGQELDSWYVILNGTVEISYPDGKSESLCMGNSFGITPSLDKQYMNGV
VRTKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVKEHRELDRSGTRKGHIVIK
ATPERLIMHLIEEHSIVDPTYIEDFLLTYRTFLTSPLEVGNKLLEWFKVDSLRDKVTRVV
LLWVNNHFNDFEGDPAMTRFLEEFEKNLENTKMKGHLRLLNIACAAKAKWRQITLQKPSR
DSPLFFSLLGGSDKGFGIFVETVEIGSKAAEAGLKRGDQIMEVNGQNFENITFVKALEIL
RNNTHLSITVKTNIFVFKELLCRIGQEKNGIPHIPKIAEKKNNRYSIPDMPGDVEQMFPR
EKGNKKIKANTVSGGRNRIRKILDKTRFSILPPKLFSDGSVSQSQDDSIVGTRQCRHSLA
IMPIPGTLSSSSPDLLQPTTSILDFSNPSDIPDQVIRVFKADQQSCYIIISKDTTAKEVV
SHAVHEFNLTGAPETYSLCEVSVSPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETE
TLCSDEDAQELLKESQISLLQLSTIEVATQLSMRDFELFRNIEPTEYIDDLYKLDSKTGN
ARLKQFEDVINQETFWVAMEILAEPNQLKRMKIIKHFIKIALHCRECKNFNSMFAVISGL
NLAPVARLRGTWEKLPSKYEKHLRDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPVVK
KDITFLHEGNDSKVDGLVNFEKLRMIAKEIRQVIRMTSANMDPAVMFRQRSLSQGSTNSN
MLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSNLNVETDEEKIQILSLQCEPA
YSTLTKNLSERRGAKSSEMSPVPMRSIGQTTKAHQHQQNRMSQVLQVPSVNLYPSRKKGL
TKEHVTFSTGSPQKSLSLSEEVSTKKQTDDTVSMASSLHSSPPASPQGSPRKVGNIQRSD
NCSQMNLSGSSSSLASEASNKNSGQRSYGIGYALIPSTKSDNFSDSSHSEISSRSSIVSN
CSVDSMSAALQDERSLPQALIVVDPTGAERKEHPQPLADYAQPCPGWSLSRPALIRGMAF
TSSMSSEEISHEHIMVEAADSGRGSWTSCSSSSHDNFQNIPNQKSWDLLNSYRHTQLDGP
IAEVDPTNCYSEEAYLYSEPFSKNNRQSKASLEVDQSRQSWASSSSLSDTYETNYGTIKR
RGLENSAAEQTEVLDSKPGTDTTYKTVTSSTEKGLIVYCVTSPKKDDRYREPPPTPPGYM
GISLADIKEGSPHHPHLKPPDYSVAVQRSKMLHSDLSRLSSASLGSDPMACISSKMPQWH
SRQPSGPKLADMTDADSEEDEDEQVSAV
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgacctctcctgtggagcccaagatcaaacaggccttgcgaaagaaaccttcggagagg
acccaggaggacttaaatactatctattctttccttcatggactggacatactctcgcat
ttcagggaacatcaactaagaataatgtcatcaagtgcctgctatgaaaggtacaagggc
aaccaagttctcttttgctcagaaactattgcaagatgctggtatatactgctttcagga
tctgtgctgatgaaggattccatgtttttaccaccttgcagttttggaaagcagtctgga
ggaaaacggggatgcgaatgtatcatactggagccttcagaaatgattgtggttgagaac
tccaaagacaatgaagaaaatatcttgcaaagagaggttccgctcaggcagtctcgccga
aggttcaggaagattaaccagcggggggaacggcagaccatcaccgaccatgtggattcc
aacagttacctcccgcttccagctgatcttaccaagatgcatcttacagacagtcctcac
cctcaggtgactcatgtcccttcgagccagtctggatgcagcatcgccagtgattctggg
agcagcagcctctctgatatttatcaggctacagaaagtgagatgggagatgttgattta
acaggtcttccagaagcacctgtagactctgaagatgaagaagaagaagaagatgaagat
attgacagaacttcggatccacttctagggcgagatgttgtacgagagtgccttgagaaa
gagcctgcagataaaacagatgatgatattgagcaattattggaatttatgcatcaactc
cctgcctttgcaaacatgactatgtctgtaagaagagaactttgttctgtgatgatattt
gaagtggtagaacaagcaggagccatcatactggaagatgggcaagaactcgattcttgg
tatgttattttaaatggcacagtggaaatcagctatcctgatgggaaaagcgagagtctc
tgtatgggtaatagttttgggattactccctctctggacaaacagtacatgaatggcgtg
gttagaaccaaagtagatgattgtcagtttgtgtgtatagcccagcaagactactggagg
attctgaaccacgtggaaaaaaacactcataaagtggaggaagaaggagaaattgttatg
gtaaaggaacacagggagctggatcgcagcgggaccaggaaagggcacatagttatcaag
gcaacacctgagcgactcatcatgcatttaatagaagaacattctattgtggatccaact
tacatagaagatttccttttaacgtacagaacatttctaacaagccccttagaagtcggg
aataaactcctggagtggttcaaagtagacagcctcagggataaggttaccagagtggtc
ttactgtgggtgaacaaccattttaatgactttgaaggagatcctgctatgactcgattt
ctggaagaatttgaaaaaaacttagaaaatacgaaaatgaaaggacatctcagattgctg
aatattgcttgtgctgccaaggcaaaatggagacaaattaccctgcaaaaaccttctaga
gactcgccactctttttcagcctccttggaggaagtgacaaaggttttggtatttttgta
gagactgtagaaataggcagtaaagcagcagaagctggacttaagcgtggtgatcagata
atggaagtaaatggacagaattttgagaacattacatttgtaaaagcgctggaaatctta
aggaacaatacacatctctccattactgtaaaaacaaacatttttgtgttcaaagagctg
ctttgcaggataggacaagaaaagaatggaattccacatattcccaaaattgcagaaaag
aaaaacaaccgttattccatcccagatatgcctggagatgtggagcagatgttcccacgt
gaaaaaggaaacaagaaaatcaaagcaaacactgtatctggggggagaaacagaatcagg
aaaattttagacaagacacggttcagcatcttgcctccaaaactgtttagtgacggtagc
gtgagccagtcgcaggacgacagcatcgttggaacgcggcagtgcaggcacagcctggcc
atcatgcccattcctgggacgctctcatctagtagccctgacctgttgcagcctacaact
agcattctggatttctctaatccttcagatattccagatcaagtaatccgagttttcaaa
gcagatcagcagagttgttacattatcatcagcaaagacactacagccaaagaagttgtg
agtcacgctgtgcacgagttcaacctgacgggagccccggagacgtactcgctctgcgag
gtgtccgtcagccctgagggggtcataaagcagaggaggcttccggatcagttctcaaaa
ctcgcggacaggattcaactcaatggacggtattacctgaaaaacaacatggagacggag
acgctgtgctcagatgaggatgctcaagagttgctgaaggaaagccaaatttcccttctg
cagcttagcaccatcgaggttgccacacagctttccatgagagacttcgaattgtttcgg
aatattgagcctacagaatacattgatgacctttataagctggactccaaaacaggaaac
gctcgcctaaaacagtttgaggatgtcataaatcaagagacgttctgggttgccatggaa
attttagcggagcccaaccagctcaaaagaatgaagattattaagcatttcattaaaatt
gccctccactgtcgagaatgcaagaatttcaattccatgttcgcggttataagtgggtta
aatctagcaccagtagcacgtctcagaggtacttgggaaaagttaccaagcaagtatgaa
aaacacctccgagaccttcaagatctctttgatccatctagaaacatggcaaaataccgc
aacatccttagcagtcagagcatgcagcctccaattattccactctttcctgttgtcaag
aaggatattacatttctacacgaaggaaatgattcaaaagtggatggcctggtaaacttt
gagaaactccgaatgattgccaaagagatccgccaagtcatcaggatgacctcggcgaac
atggatccagccgtgatgttcagacaaaggtctctgagccagggcagcacaaactcaaac
atgctcgatgtacagggaggcgctcacaagaaacgtgcccgacgcagctcgcttctgaac
gccaagaaactgtatgaggatgcccagatggcaaggaaggtgaagcagtacttgtccaac
ctgaatgtagaaacagatgaagaaaagatccagatactgtcacttcagtgtgagcctgca
tatagcactctgacaaagaatttaagtgagagaagaggggcgaaatcctcagaaatgtct
ccagtgcctatgagatcaattggccaaaccactaaagcccatcagcatcaacaaaacaga
atgagtcaagtacttcaggttccgtctgtgaatttataccccagcaggaaaaagggactg
acgaaggagcatgtcacgttcagtacaggctccccacagaagtcattaagtttgtctgag
gaagtaagtactaagaaacaaacagatgacactgtgtctatggcatcttctttgcactcc
agcccgcctgcttctcctcagggctctccccgcaaagttggtaacatccagaggtctgat
aactgcagtcagatgaatctgtctgggtcttcctcgtcccttgccagcgaagccagcaac
aagaacagtggacagcgcagctatggaataggctatgccctcataccttccaccaaatcc
gataacttctcggattccagtcacagcgagatttcctcccgctccagcatagtgagtaac
tgctcggtggactccatgtcggcagcgctgcaggacgagaggagcctgccccaggcgctc
atcgtcgtggaccccacgggggcagaaaggaaggagcatccgcagcccttagccgattac
gcccagccttgcccgggctggtcactcagtaggcctgctctaatcagagggatggctttc
acatcgtccatgagcagcgaggagatctcccacgagcacatcatggtcgaggcggcagac
agtggccggggaagctggacttcatgctcaagtagttctcatgacaacttccagaatatc
ccaaaccagaagagctgggatctcctcaattcctaccgtcacacccagctggatggacct
atagctgaagttgatcccacaaattgttactctgaggaggcttatttatattctgaaccc
ttttccaaaaataacaggcagtcgaaagccagcctggaagtcgatcagtctcggcagagc
tgggcctcctcgagctccctctcagacacgtacgagacaaactatgggacgattaagcgg
agggggctggagaactctgcagcggagcagactgaggttttggactctaaaccaggcacc
gatacgacttacaaaactgttacttcaagtacggaaaaaggcctgatagtgtactgtgtc
acctcacctaagaaggacgataggtatagggagccaccgcccacccctccgggatatatg
gggatttctttagcggacataaaggaaggatcgccccatcacccacacctaaaacctcca
gactatagtgtggcagtgcagaggtcaaagatgctgcacagcgacctctctagactttca
tcagcttctctcggtagtgacccgatggcctgtatttcctcgaagatgcctcagtggcat
agtcggcagccgtccggccccaaactagcagatatgactgacgcagatagtgaagaggat
gaagatgaacaagtatcagcagtgtaa
DBGET
integrated database retrieval system
