Apteryx rowi (Okarito brown kiwi): 112968743
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Entry
112968743 CDS
T07573
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03440
Homologous recombination
arow03460
Fanconi anemia pathway
arow04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112968743 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
112968743 (BRCA1)
03460 Fanconi anemia pathway
112968743 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
arow01009
]
112968743 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arow04121
]
112968743 (BRCA1)
03036 Chromosome and associated proteins [BR:
arow03036
]
112968743 (BRCA1)
03400 DNA repair and recombination proteins [BR:
arow03400
]
112968743 (BRCA1)
Enzymes [BR:
arow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112968743 (BRCA1)
Protein phosphatases and associated proteins [BR:
arow01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112968743 (BRCA1)
Ubiquitin system [BR:
arow04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112968743 (BRCA1)
Multi subunit type E3
BRCC complex
112968743 (BRCA1)
Chromosome and associated proteins [BR:
arow03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
112968743 (BRCA1)
DNA repair and recombination proteins [BR:
arow03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
112968743 (BRCA1)
BRCA1-A complex
112968743 (BRCA1)
BRCA1-B complex
112968743 (BRCA1)
BRCA1-C complex
112968743 (BRCA1)
BRCA complex
112968743 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
112968743 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
BRCT_2
zf-RING_UBOX
zf-RING_2
BRCT_3
zf-Nse
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_6
zf-RING_5
zf-MIZ
zf-ANAPC11
RTT107_BRCT_5
Zf_2nd_IFT121
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
112968743
NCBI-ProteinID:
XP_025927057
Ensembl:
ENSARWG00000014206
LinkDB
All DBs
Position
Unknown
AA seq
1864 aa
AA seq
DB search
MDLSVIAVGDVQNVLSAMQKNLECPICLDVIKEPVSTKCDHIFCRFCMFKLLSKKKKGVI
QCPLCKTEVTKRSLQENSRFKQLIEGLLETIHAFELDTGVKFLNSHHFSKTSIEANAAEA
LCKESSIIQSRGFRNRKKRAKENGQENCTLQEANTDPQLTDTRVKRCPLRNRNQKCDSDT
GIYIEFGSDSSEELFKQAGNTGRLGDKEVLQLSSQEKLEELKSSEKGNEYSCKIQPVKLR
AKEVILPNVIGESDSLKEGLSKKSTQNITEHAKPGQVNVTECQSSPLNVLSADLLAEQCE
RVGNASPLRKGGTSFFKNMEEMDAEQTQCNSKSKESDLEDSSESKVDKSKEIDIVVQCVE
DVEMCEPENDSLPEEEPPLEKPETLHSDTLNQVSRKRLKRSIQKVNEWFSKSNEILSSGS
SQDGPAEATDTSAEGDAYLSDKDSCISEKTNLMVNCMEITVIEENKKLSKPAADSIKDKI
FGKTYKRERKSNPPIILREILPTAKNEDVAADEKCLNNSTMDKLKRKRKTACVLQPEYFI
KKKDLGEADGCPQSVNWCLGETEKKKHDENSAVNESSVTEKRKDNTLAELGEGESIWKNA
TEEVTGESNGALEPNNCDQKSTKKTRSSLAKKCRHSTRAMHALQLVVGRNSGSPDPAEPQ
IDSYPSSEEPRKVDSEHRQVRRSRRLQLLAEEMTKETGKRRILTEGAGKYDSRSGGSFSG
VQRNVLVHSSECKDLGEQQDILSYRPATNLKSAELEADEIQISLKNSSDTANTGKSPFNP
TSSCQHSNFGSVVPDTDSQEGEILGSPFLLGPPSVNAVQTASQVTKQKATEACTTFPQDN
GHYTDNVPEDFRNEKSLMTENVLELTKEAEDSELDTQYLRNIFRHSKRLSFTLYPSPMKA
CVIEDAASETLKISCADQVENKHSKYLKTENLQVEKTASESLNRVCEKEKLKTYESVCVS
PVSCFVSNTERMHTGEHRENVSQVADQGNLTSPIRIGGTVVENKNEQQKREQANNKTVSA
DTVIESELSQNPFESNKGQSDQSNTEEHVFQRINTVNEIGFSSESNQAENAEVDEGKGPL
LHFQPSMVCSTVCQQSPAEFNCKDMEKKDGIRERKQAKSNEEQAMQTASIGMPECLISEA
LEHPLKVSTDFPGLSETPDGLLCSDDDIEENSSFCETDRKERSAVFVKRSDSALVKELDG
RSVNSTPISQGIQRSRRRVQKLQSSEEESSEDENLPCFQALIFGKSASTPLQFNKQMTSV
VGSSVNPSTLPHSGSHNDRSMQKXPGAALSTGCVSPSQESECSVNLFSSQSNLSEESVDG
AQELKKPLTLVLASKQMSNQNDNKETFQSCNGGLKKRKTNLKDEYQEDPNMGANLGEASG
YDSETSHVEDSSGPFSQAEILTTQQKNAMQNNLKKLQQEMAVLEAVLKQHESQDSEFSPV
CKELPHSSSEGALRTEQMRQVRGTESTSKVNFAIHKCSSSKGFSPDDFHVKSSDSSNIKI
KELEEGSPVLLLPSSKSCLLKRPDLEKGLQCDSVLKNKAPFQEKKTLPEAVKERSQCQLE
SENAADEKSGAKRNSASVLPDLCGNVSRSPNSSSSSIRLLHPQTAEATNSSAVAQNANRS
CNQGCKQGRSVCFPTSVLHNTAGKENATSPVVTNRREMSIVASGLNRSEHLVVQKFARKT
QSTLSNHITEGTTHVIMKTDMDLVCERTLKYFLGIAGRKWVVSYQWVIQSFKEGRILDED
NFEVRGDVINGRNHQGPKRARQSLTERIFKDFEICCYGPFTDMTTEHLEWMVELCGASVV
KQLHLFKHKTNSTAVVVVQPAAWMENTGYRAIQQKNNVAVVTREWVLDSVACYECQEFDA
YLVS
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atggacctatctgtgattgccgttggagatgtccaaaacgtcctttcagctatgcagaaa
aacttggagtgcccgatatgcttggacgtgataaaagagccagtttccacaaaatgtgat
cacatattctgcaggttctgtatgtttaaactcctcagcaaaaagaaaaaaggtgtgata
cagtgtcctctgtgcaagactgaagttaccaaaagaagtcttcaggaaaattccagattt
aagcaactaattgaaggattgttggaaacgatccatgcttttgagcttgacacgggagtg
aagtttctaaacagtcatcacttttctaaaacatccatagaagccaatgctgctgaggcc
ctgtgtaaagaaagttctatcatccaaagtagaggtttcagaaacaggaaaaaaagagct
aaagaaaatggacaagaaaattgtaccttgcaggaagctaacacggatccacaacttaca
gataccagggtcaaaaggtgtcccttgagaaacagaaaccagaaatgtgactctgataca
gggatatatatagagtttggctctgattcatctgaagagcttttcaaacaggcaggcaat
actggcaggttaggagacaaagaagtgcttcagctttcatctcaagaaaagctagaagaa
cttaagagttctgagaaggggaatgaatattcttgcaaaatacagcctgttaagctgcgt
gccaaagaagtaattctgccaaatgtcataggtgaaagtgattccttaaaggaaggtttg
agcaagaaaagcactcagaacatcactgaacatgccaaacctggccaagtgaatgtgact
gaatgccagagttctcctttaaatgttctttctgcagacttacttgcagagcagtgtgag
agagtgggtaatgccagccccttgaggaaggggggcacgtctttctttaaaaacatggaa
gaaatggatgcagagcaaactcaatgcaatagtaaaagcaaagagtctgacttagaagat
agctcagagagcaaggtggataaaagcaaggaaatagatattgttgtgcaatgtgtggaa
gatgtggaaatgtgtgaacctgagaatgattctcttcctgaagaagaacctcctctggag
aagccagagacgcttcacagtgataccctgaatcaggtttctaggaagagattaaagcga
agcattcagaaagtcaatgaatggttttcaaaaagcaatgagattctgtcttcyggttct
tcccaggatggtcctgctgaagcaactgatacttcagctgaaggagatgcatatttatca
gataaagattcctgtatttcagagaagactaaccttatggtaaactgcatggaaattaca
gtcattgaagaaaataagaaattgtcaaaaccagcagcagatagcatcaaagacaaaata
tttggaaaaacatacaagagagagaggaagtcaaatccccctattatcttgagagagatt
ttacctactgcaaaaaatgaagatgtggctgctgatgaaaaatgcttgaataattctaca
atggacaaactaaaacgtaaaaggaagactgcctgtgtcctgcaacctgagtacttcatc
aagaaaaaagatctgggagaggcagatgggtgccctcaaagtgttaactggtgccttgga
gagactgaaaagaaaaaacatgatgaaaattctgctgttaatgagagttctgtgactgag
aaaagaaaggataatacactagcagaacttggggaaggagaatccatatggaaaaatgct
actgaagaagtgactggtgaatccaatggagcgctagaaccaaataactgtgatcagaag
agcactaaaaaaacaagaagttctttagcaaaaaaatgcagacattcgactagagctatg
catgctctacaattagtagttggtagaaactcaggctcccctgatccagctgagccacag
attgatagctatccaagcagtgaagagccaagaaaagttgattctgagcacagacaagtc
aggcgcagcagaagacttcagttacttgctgaagaaatgacaaaagaaacaggaaaaaga
aggatactaactgagggagcaggaaagtatgacagcagaagtggagggtctttctctggt
gtgcaaaggaatgtgttggttcattcttctgaatgcaaagacctgggtgagcagcaggat
atactgagttataggccagccactaatctgaagagtgctgaactggaagctgatgaaata
cagattagtctaaagaattcatctgacactgcaaacactggaaaaagtcccttcaatcct
acatcttcatgtcagcattcaaattttggttctgttgtacctgatacagactctcaagaa
ggtgaaatactaggtagccctttcctccttgggcctccttcagtgaatgctgtgcaaact
gcttcccaggtgaccaaacagaaggcaactgaagcatgtactacttttcctcaggacaat
ggacactatacagataatgttccagaggactttagaaatgaaaaatcactaatgactgaa
aatgttttggaactgaccaaggaagctgaagatagtgaattagacacacagtatctgcga
aatatatttaggcattcaaaacgactatcatttaccctttatcctagtcccatgaaggca
tgcgtaatagaagatgctgcttctgaaactttaaagatatcatgtgctgatcaggtagaa
aataagcatagcaaatatttaaaaactgaaaacttgcaagtagagaaaacagcttctgaa
agcttgaatagggtttgtgagaaagaaaagcttaagacctatgaatctgtttgtgttagt
cctgtgtcttgctttgtcagtaacactgaacgtatgcacactggggaacatcgagaaaat
gtttcacaggttgcagatcaagggaatctgacatcaccaataagaataggtggtactgtg
gttgagaataaaaatgaacagcaaaaaagagagcaggcaaataataagacagtgtcagct
gacacagtgatagaaagtgagctaagtcagaatccattcgaaagtaataaaggccaaagt
gatcagagtaatacagaagagcatgttttccaaagaataaacacagttaatgaaataggc
ttcagttcagaaagtaatcaagcagaaaatgctgaagttgatgaaggcaaaggaccatta
ttacattttcagccatcaatggtttgttctacagtttgtcagcaaagtcctgctgaattt
aactgcaaagacatggaaaagaaagatggcataagagaaagaaaacaagcaaagagcaat
gaagaacaagcaatgcaaactgccagcatagggatgcctgagtgtttaatttcagaggct
ctagaacatcctcttaaagttagtactgattttccaggcctgtctgaaacccctgatggc
ttactatgctctgatgatgatattgaagagaacagcagcttttgtgaaactgataggaaa
gagagatctgctgtgttcgttaaaagaagtgacagtgccctggtaaaagaactggatggt
agaagtgtaaattctacgcctatatctcaaggtattcagagatctcgaagaagagtgcag
aagcttcaatcttcagaggaagaatctagtgaggatgaaaatttaccatgttttcaggca
ttaatatttggcaaatcagcaagcacgcctttgcagttcaataaacagatgacatctgtg
gtaggctcttcagtaaatcccagcacattgcctcacagtggaagtcataatgaccgtagt
atgcagaaaayaccaggagctgccctaagtactgggtgtgtttctccaagccaggaatca
gaatgttctgttaacttattttcttcccagtccaacttgtctgaagagtcagttgatgga
gcacaagaactgaagaagcctttaacgctagttcttgcatccaaacaaatgagcaatcag
aatgacaataaagaaacttttcaaagttgtaatggagggctgaagaaaagaaaaactaac
ttgaaagatgaataccaagaagacccaaacatgggagcaaacctaggtgaagcatccgga
tatgatagtgaaacaagtcatgtagaggattcgtctggaccattctctcaggctgaaatc
cttactacacagcagaagaatgctatgcaaaacaatctaaaaaaacttcagcaagaaatg
gctgtacttgaagcagtgctaaagcagcatgaaagtcaggactctgaattttcacccgta
tgtaaggagctgccacattctagtagtgaaggagcactcagaacagaacagatgagacaa
gtaagagggacagagtcaacctcaaaagtaaattttgcaattcacaaatgcagcagttca
aagggattttcacctgatgatttccatgttaagtcaagtgattcttccaacattaaaatc
aaagagctagaagaagggtctccagtactattgcttccctcttctaaatcttgcttgtta
aagagaccagatctcgagaaaggccttcagtgtgacagtgttctgaagaacaaagctcct
tttcaagagaagaaaaccctgccagaagcagtgaaagagcgtagccagtgtcagcttgaa
tcagaaaatgcagctgacgagaaatctggggccaagcgaaacagtgcatctgtcttacca
gatctctgtggaaatgtgagcaggagtccaaacagctcttcctcctccataaggcttctc
caccctcaaactgcagaagcaacaaatagttctgctgtagctcagaatgctaatagaagc
tgtaatcaaggatgtaaacaggggagaagtgtgtgttttcctacatctgttctgcacaat
acagctgggaaagaaaatgctacaagtccagttgtgactaacaggcgtgaaatgtcaatt
gtggcatcgggtctgaatcgaagtgaacatttggtggtccagaagtttgccagaaaaact
cagagcactttatctaatcacattactgaaggaacaacccatgtcatcatgaaaacagat
atggatctggtgtgtgaacggacattgaagtattttctgggtattgcaggaagaaaatgg
gtagttagttatcagtgggtaattcagtcttttaaagaaggaagaatacttgatgaggat
aactttgaagttagaggagatgtgatcaatgggagaaaccaccaaggcccaaagagggct
agacaatctctgactgaaaggatctttaaagactttgagatctgctgctatggacctttc
actgatatgaccacagaacatctagaatggatggtggagctttgtggtgcctctgtagtg
aagcaacttcatctgttcaagcacaaaacaaattctactgctgtcgtggttgtgcagcca
gctgcttggatggaaaacacaggctacagagcaatccagcaaaagaacaatgttgctgtg
gtgactcgagagtgggtattagacagtgttgcttgctatgagtgccaggagtttgatgct
tacctcgtgtcctaa
DBGET
integrated database retrieval system
