Limnospira platensis: NIES39_E03970
Help
Entry
NIES39_E03970 CDS
T02608
Name
(GenBank) HlyD family secretion protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
arp
Limnospira platensis
Pathway
arp01501
beta-Lactam resistance
arp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
arp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NIES39_E03970
01503 Cationic antimicrobial peptide (CAMP) resistance
NIES39_E03970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arp03036
]
NIES39_E03970
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arp02000
]
NIES39_E03970
01504 Antimicrobial resistance genes [BR:
arp01504
]
NIES39_E03970
Chromosome and associated proteins [BR:
arp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NIES39_E03970
Transporters [BR:
arp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NIES39_E03970
Antimicrobial resistance genes [BR:
arp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NIES39_E03970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
DUF2613
Flagellin_C
HlyD_2
DUF745
Biotin_lipoyl
Avr2
Tropomyosin
UPF0242
DUF4398
FliJ
Motif
Other DBs
NCBI-ProteinID:
BAI90624
LinkDB
All DBs
Position
complement(2818920..2820464)
Genome browser
AA seq
514 aa
AA seq
DB search
MVHKDTLPDIDDDQYPELSLNGDRVKFEDLEEEPEEAVPPQAGGWRNMVIGVAIGIVATL
GVLHFSSNNSSEPVTEESPGVEVAPAVSPSATQTVTVAPVEMTTVARTLDVTGTVEAYDL
LPVLPQASGVQIQQVLVNQGEMVTQGQVMAVLDDSVLRSQIDQANAQVESANSLVRQREA
NLGQAQAGLAQAQASLLEAESLLTQNQARLAEAKANLDQARREVERYEDLSSQGVVSRQE
LETRITTAKTAEEGVRVAEANISSARATISSARANIGSAQANVESAESNIRSAEAEVRSA
QARVRQLETQREQTVVRAPMSGIVAQRTARVGDVTGNQQLFSIIAENQLELHAKVPETQL
SQVRIGAAVTVTSDADQNLQVRGVVREIAPLIDPQSRQATVKIDLPPLGAIRDSFLRPGM
FLRAAITTTTVQGMKVPARAIVPQADGSSIVYRLLPDDTVEARTVEVGRLQGRLTGDLSE
ASIEIIQGLNVGDRIAIAGASYLKDGDKVNVVSR
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtggttcataaagatacattaccagatattgatgacgatcaataccctgaattgtcacta
aatggcgatcgcgttaaatttgaagacctagaggaagaacccgaggaagctgtacctccc
caggcgggcggttggcggaatatggtgatcggggtagccataggaattgtggcgactctg
ggagttctacacttttcctctaacaacagttccgaacccgtaaccgaggaaagcccaggg
gtagaagtagcgccagcagttagtcccagcgccacccaaacggtgacagtagcgccagtg
gaaatgacgactgtggcgcgcacccttgatgtaacggggactgtggaagcctacgaccta
ctcccagttttaccccaagccagcggagtgcaaattcaacaggttttagtaaatcagggg
gaaatggtaacacagggacaggttatggcggtgttggatgattcggttttgcgatcgcaa
attgaccaagccaacgcccaggtagagtccgccaattccctcgtccgtcagcgggaagct
aacctcggacaagcccaagccggtctcgcgcaagcgcaagcgagtctattggaggctgag
tcattactgactcaaaatcaagctaggttagcggaagccaaggctaatttagatcaagcc
cgccgagaagtagaacgctatgaagatttaagcagccaaggggtggtgagtcgccaggaa
ctagaaacccgcattaccacggcaaaaacggccgaagaaggggtgagagtcgcagaggct
aatatttctagcgctagggctaccattagcagcgctagggctaatataggcagtgcacag
gctaacgtggaaagcgccgagtctaatatccgtagtgcagaggctgaggtgcgtagcgcc
caggcgcgggttcgccagttggaaactcaacgggaacaaactgtagtccgtgcgcctatg
agtggcattgtcgcccaacggacagcgcgagtgggggatgttactggtaatcaacaactg
ttttcgattattgcggaaaatcagttagaactacacgcgaaggttccagaaactcagtta
tcacaggtgagaattggtgctgctgttactgtgacttctgatgctgatcaaaatttgcag
gtgcgaggggtggtgcgagaaattgcgcctctgattgatcctcaaagccgacaagctact
gtgaaaattgacctgcctcccttgggggctattcgtgattctttcttgcgtccgggaatg
tttctgcgggcggcgattactactactactgtacaaggaatgaaggttcccgctagggcc
atcgttccccaggctgacggtagttctattgtttatcgtctattacctgatgatacggtg
gaagcgcgaactgtggaagtgggaagacttcaaggccgtttaacaggcgatttatcggag
gcgagtatagaaattatacagggtttaaatgtaggcgatcgcattgcgatcgctggtgca
agttatcttaaagatggcgataaagttaatgtggtgtcgcggtga
DBGET
integrated database retrieval system
