Arthrobacter sp. Rue61a: ARUE_c30530
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Entry
ARUE_c30530 CDS
T02215
Symbol
yodJ1
Name
(GenBank) putative carboxypeptidase YodJ
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
arr
Arthrobacter sp. Rue61a
Pathway
arr00550
Peptidoglycan biosynthesis
arr01100
Metabolic pathways
arr01502
Vancomycin resistance
arr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
arr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ARUE_c30530 (yodJ1)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ARUE_c30530 (yodJ1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
ARUE_c30530 (yodJ1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
arr01002
]
ARUE_c30530 (yodJ1)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
arr01011
]
ARUE_c30530 (yodJ1)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
arr01504
]
ARUE_c30530 (yodJ1)
Enzymes [BR:
arr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
ARUE_c30530 (yodJ1)
Peptidases and inhibitors [BR:
arr01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
ARUE_c30530 (yodJ1)
Peptidoglycan biosynthesis and degradation proteins [BR:
arr01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
ARUE_c30530 (yodJ1)
Antimicrobial resistance genes [BR:
arr01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
ARUE_c30530 (yodJ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
UCR_TM
Motif
Other DBs
NCBI-ProteinID:
AFR29938
LinkDB
All DBs
Position
3365814..3366683
Genome browser
AA seq
289 aa
AA seq
DB search
MANNPQPMPSRRAFASLLTAGAGMAALAACAPDNTAPSPVAANAASGVPSASETPSAATP
GATATEPAPVEPAPSAEPSSTAPSSSVAPQHSLTDPTSPWVVVNKHRPLAPQDFVPADLV
QPNIQLAVSGEAALLNSTTAAAAEKMFGAAASEGIIMTLASGYRSYSTQVATYNGYVAST
GQAAADRASARPGHSEHQTGWSFDIGDGGGACSFQPCFAEQPAAVWAKANAHKFGFVVRY
PWMFHDTTGYFYESWHLRYIGVEAATDMATRGIATLEEYFGLEAAPDYL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtggccaacaatcctcagccgatgccgagccgtcgcgctttcgcgagcctgctgaccgca
ggtgcaggaatggcggccctcgccgcctgcgcaccggacaacactgcaccctcccctgtt
gcggccaacgccgccagcggggttccctcggcctccgaaacgccttccgccgccaccccc
ggtgccacagccaccgagcctgcacccgtcgaacccgcgcccagcgctgaaccgtccagc
accgccccgtcgagttccgttgccccgcagcactcgctgacggaccccacgagtccctgg
gttgtggtcaacaagcaccggcccttggctccccaggacttcgttccggcagatttggtc
cagccgaacatacagctcgccgtcagcggcgaagcggctttgcttaacagcacgacggcg
gccgcggcagagaagatgttcggggcagcagcctcggagggcatcatcatgacgttggcc
tccggctaccgttcctattccacccaagtggccacgtacaacgggtacgtagcgagcacc
gggcaggcggcagcggaccgcgcctccgcccgcccagggcactccgagcatcagacgggg
tggtccttcgacattggcgatggtggcggagcgtgcagcttccaaccatgcttcgccgaa
caacccgccgcagtgtgggcgaaagccaatgcccacaagttcggctttgtggtccgctat
ccgtggatgttccacgacactaccgggtacttctacgagtcctggcacctgcgctacatc
ggcgtggaggcggcaaccgacatggccacgcggggcatcgcgaccctggaagagtacttc
gggctcgaagcagcgccggactacctctag
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