Arsenicicoccus sp. oral taxon 190: ADJ73_15480
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Entry
ADJ73_15480 CDS
T04014
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ars
Arsenicicoccus sp. oral taxon 190
Pathway
ars03030
DNA replication
ars03410
Base excision repair
ars03420
Nucleotide excision repair
ars03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ars00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ADJ73_15480
03410 Base excision repair
ADJ73_15480
03420 Nucleotide excision repair
ADJ73_15480
03430 Mismatch repair
ADJ73_15480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ars03032
]
ADJ73_15480
03400 DNA repair and recombination proteins [BR:
ars03400
]
ADJ73_15480
Enzymes [BR:
ars01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ADJ73_15480
DNA replication proteins [BR:
ars03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ADJ73_15480
DNA repair and recombination proteins [BR:
ars03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ADJ73_15480
NER (nucleotide excision repair)
GGR (global genome repair) factors
ADJ73_15480
MMR (mismatch excision repair)
DNA ligase
ADJ73_15480
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ADJ73_15480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
HHH
Nlig-Ia
PTCB-BRCT
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AKT52922
UniProt:
A0A0K1FER3
LinkDB
All DBs
Position
1:complement(3306297..3308426)
Genome browser
AA seq
709 aa
AA seq
DB search
MPTTATEVADASVEARHRWTELVQQIRDAQEAYYGKDAPTLSDAAYDQLMRDVQQLEEQY
PDLRTPDSPTQTVGTFHRATDFAPVEHRERMLSLDNVFSADELAEWLARVERDLEGAPHY
LCELKIDGLAIDLVYEDGRLVTGATRGDGRVGEDVTPNVRTIEGIPHHVRGEDVPGLLEV
RGEIFFPIEAFGDLNASLVEQGRAPFANPRNAAAGSLRQKDSRVTATRPLHMLVHGIGAR
QGFTITRQSQAYELLRGWGFPTSTHYRVFESPQEVLDFVAYYGEHRHDVEHEIDGIVVKV
DELALQGRLGTTSRAPRWAIAYKYPPEEVNTRLLDIRVNVGRTGRVTPYGVMEPVKVAGS
TVEMATLHNAFEVVRKGVLIGDIVVLRKAGDVIPEILGPVVDLRDGSEREFVMPTHCPAC
GTALAYEKEGDKDIRCPNARTCPSQLRERIFGLAGRGGFDIEALGWEGAIALLDAGVIAD
ESTLFDLSATDVARVPLYTRAATKKELADPGAVPAPGIVEGRVLSANGRKLVDNLAGAKE
QPLWRVLVALSIRHVGPTAARALATHFGSMDAIRAASQEELADVEGVGGVIAESVVAWFA
VDWHREIVDRWAAAGVRMADERDASVERTLDGLTVVVTGSLEGFTRDSAKEAIVVRGGKA
AGSVSKKTDFVVIGEGAGTKAAKAEELGRPILDEAGFVRLLEGGPDAVS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atccccaccaccgccacggaggtggccgacgcgtcggtcgaggcacggcaccggtggacc
gaactggtccagcagatccgcgacgcgcaggaggcctactacggcaaggacgcgccgacg
ctgtccgacgcggcctacgaccagctgatgcgggacgtgcagcagctcgaggagcagtac
cccgacctacgcacccccgacagcccgacccagacggtcgggaccttccaccgggccacc
gacttcgcgccggtggagcaccgggagcggatgctcagcctggacaacgtcttctccgcc
gacgagctcgccgagtggctggcgcgggtcgagcgggacctcgagggagcaccgcactac
ctgtgcgagctcaagatcgacgggctggcgatcgacctggtctacgaggacggccggctc
gtcaccggggcgacccgcggcgacgggcgggtgggggaggacgtgacccccaacgtgcgc
accatcgaggggatcccccaccacgtccgcggcgaggacgtgcccgggctgctcgaggtg
cgcggcgagatcttcttccccatcgaggccttcggcgacctcaacgccagcctggtcgag
cagggcagggcgcccttcgccaacccgcgcaacgcggcggcggggtcgttgcggcagaag
gactcccgcgtgaccgcgacgcggccgctgcacatgctggtgcacggcatcggggcgcgc
cagggcttcaccatcacgcggcagagccaggcctacgagctgctgcgggggtggggcttc
ccgacgtcgacgcactaccgggtcttcgagagcccgcaggaggtgctggacttcgtcgcc
tactacggagagcaccggcacgacgtggagcacgagatcgacggcatcgtcgtcaaggtc
gacgagctggcgctgcaggggcgcctcggcacgacttcccgcgctccccggtgggcgatc
gcctacaagtacccgcccgaggaggtcaacacccggctgctcgacatccgcgtcaacgtc
gggcgcaccggccgggtgactccgtatggcgtcatggagccggtcaaggtcgcgggctcc
accgtcgagatggcgaccctgcacaacgccttcgaggtggtccgcaagggcgtgctcatc
ggcgacatcgtggtgctgcgcaaggccggggacgtgatccccgagatcctcggcccggtc
gtggacctgcgcgacgggtccgagcgggagttcgtgatgcccacgcactgcccggcctgc
gggacggccctcgcctacgagaaggagggcgacaaggacatccgctgccccaacgcgcgg
acctgcccgagccagctgcgcgagcggatcttcggcctggccgggcgcggcggcttcgac
atcgaggcgctcggctgggagggcgcgatcgcgctgctcgacgccggggtgatcgcggac
gagtcgacgttgttcgacctctccgcgaccgacgtggcccgggtgccgctctacacccgc
gctgccaccaagaaggagctcgcggaccccggcgcggtgcccgccccgggcatcgtcgag
ggccgggtgctctcggccaacggccgcaagctcgtcgacaacctcgcgggcgccaaggag
cagccgctgtggcgggtgctcgtggccctgtcgatccgccacgtcgggccgacggcggcg
cgggcgctcgcgacccacttcgggtcgatggacgcgatccgcgcagcgtcgcaggaggag
ctcgcggacgtcgagggcgtcggcggcgtgatcgccgagtcagtcgtcgcgtggttcgcg
gtcgactggcaccgcgagatcgtcgaccgctgggccgcggccggggtgcgtatggcggac
gagcgggacgcctccgtcgagcgcaccctcgacgggctgaccgtggtggtcaccggctcc
ctcgagggcttcacccgcgactccgccaaggaggcgatcgtcgtccgcggcggcaaggcg
gccgggtcggtgtccaagaagaccgacttcgtcgtcatcggtgagggggccggcaccaag
gccgccaaggcggaggagctggggcgccccatcctggacgaggcggggttcgtgcggctg
ctcgagggcggcccggacgcggtctcctga
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