Arthrobacter sp. PGP41: C3B78_06235 Help Entry C3B78_06235       CDS       T05450                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism arth  Arthrobacter sp. PGP41 Pathway arth03030   DNA replication arth03410   Base excision repair arth03420   Nucleotide excision repair arth03430   Mismatch repair Brite KEGG Orthology (KO) [BR:arth00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     C3B78_06235    03410 Base excision repair     C3B78_06235    03420 Nucleotide excision repair     C3B78_06235    03430 Mismatch repair     C3B78_06235  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:arth03032]     C3B78_06235    03400 DNA repair and recombination proteins [BR:arth03400]     C3B78_06235 Enzymes [BR:arth01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      C3B78_06235 DNA replication proteins [BR:arth03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      C3B78_06235 DNA repair and recombination proteins [BR:arth03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      C3B78_06235    NER (nucleotide excision repair)     GGR (global genome repair) factors      C3B78_06235    MMR (mismatch excision repair)     DNA ligase      C3B78_06235   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       C3B78_06235 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT Nlig-Ia HHH BRCT_2 Auto_anti-p27 HHH_3 Motif Other DBs NCBI-ProteinID:  AUZ34096 UniProt:  A0A2L0QWQ3 LinkDB All DBs Position 1384221..1386461 Genome browser AA seq 746 aa AA seqDB search MSTGPGPAEQTATRTTEPVEPNAIPSESVRGEYENLVDLVRKYRFAYYQEDAPLVSDAEF DELFRRLEEIEALHPELVANDSPTQEVGGEVSAAFAAVEHLQRMYSLEDVFSLEELEAWL TRASASIEKLGNGSQKPAWLTELKIDGLAVNLLYRDGKLVRAATRGDGTTGEDITHNVLT IKEIPQELRGGSFPAEMEVRGEVFIPSKEFAEFNEALIEAGKAPLANPRNAAAGSLRQKD PAETAKRPLKMFVHGIGAREGLKARSQSETYDLLKDWGLPVSPYSEVLGSLDEVLEFIRR YGDKRHKLLHEIDGIVIKVDDFATQRALGYTTRVPRWAVAYKYPPEEVHTKLLDIQVNVG RTGRVTPFGLMEPVKVAGSTVEMATLHNQDVVKAKGVKIGDIVILRKAGDVIPEIVGPVL ALRDQQDPPVRDFVMPTECPSCGTPLAPAKEGDVDIRCPNAKSCPSQLRERVFHLAGRGA FDIEALGWEAAIALTQPAEPEVPPLTSEAALFDLTPEDLAGVRIRREKRSKGVPTGDYEL VPYFYSKGTAKTPSKPTATTEKLFKELEKAKTQPLWRVLVALSIRHVGPRASRALATAFG SMDAIRQASEEDLAHVDGVGPTIAAALKEWFAEDWHQEIVDRWAAAGVRMEDERDESMPR TLEGLTVVVTGSLPNFSRDEAKEAILVRGGKAAGSVSRNTSYLVAGESAGTKLDKAEQLG IPVLDEDGFRRLLAGGPAALEESGES NT seq 2241 nt NT seq  +upstreamnt  +downstreamnt gtgagtacaggaccaggccccgctgaacagaccgccacccgcaccacggaacccgtcgag ccgaacgccatccccagcgaatcggtccgcggggaatacgaaaacctcgtggacctcgtc cggaaataccgctttgcctattaccaggaagacgccccgctggtctccgatgcggaattc gacgagctcttccgccggctggaggagatcgaggcgctccaccccgaactcgtggccaac gattcgcccacccaggaggtgggcggggaagtttcggccgccttcgcagcagtggagcac ctccagcggatgtacagcctcgaggacgtcttttccctcgaggagctggaggcttggctt accagagcgtcagcaagtatcgagaaactgggcaacgggtcgcagaagccggcctggctg accgaactgaagattgacggcctggcggtcaacctcctgtaccgcgacgggaaactggtg cgtgctgccacccgcggcgatgggaccaccggcgaggacatcacgcacaacgtcctgacc atcaaggaaatcccgcaggagctccgcggcgggagctttccggcagaaatggaagtccgg ggcgaggtatttatcccctccaaggaattcgccgagttcaacgaggcgctgatcgaagcg ggcaaggcgcccctggccaacccccgcaacgccgctgcaggctcgctccggcagaaggac ccggcagaaacagccaagcgcccgctgaagatgttcgtccacggcatcggtgcacgcgag ggcctcaaggcccgcagccagtccgaaacctatgacctgttgaaggactggggcctgccc gtcagcccctactccgaggtgctggggagcctggacgaggtcctggaattcatcaggcgc tacggggacaaacgccacaagctgctgcatgagatcgacggcatcgtcatcaaggtcgac gacttcgccacccagcgggccctcggctacaccacccgggtgccgcggtgggccgtcgcc tacaagtatccgccggaggaagtgcacaccaagctgctggacatccaggtcaacgtgggg cgcaccggccgcgtgacgccctttggcctcatggagcccgtcaaagtggcgggctcaacg gtggagatggccaccctccacaaccaggacgtggtcaaggccaaaggcgtgaagatcggc gacatcgtgatcctgcgcaaggccggcgacgtcatcccggagatcgtgggccccgtcctt gccctccgcgaccagcaggacccgccggtacgcgacttcgtgatgcccaccgaatgcccc tcctgcggcacaccgctggctccggccaaggagggcgatgtggacatccgctgccccaac gccaaatcgtgcccgtcgcagctaagggagcgggttttccacctggccggccgcggagcc ttcgacatcgaggccctcggctgggaggctgccattgcactgacccagccggccgaaccc gaagttccgccgctcacctcggaagctgcgctcttcgacctcacccccgaggacctggcc ggagtccggatccggcgcgagaagcggtccaagggcgtccccaccggcgattacgaactg gtgccctatttctacagcaagggcacggccaaaaccccctccaagcccacggccaccacc gagaaactgttcaaggaactggagaaggccaaaacccaaccgctgtggagggtgctggtg gccctgtccatccggcacgtgggaccgcgggcctcgcgcgccttggcgacggcgttcggc agcatggatgccatccgccaggcgtcagaggaagacctggcacacgttgacggcgtgggc cccaccattgccgcagcgctgaaggaatggttcgcggaggactggcaccaggagattgtt gaccgctgggcggccgccggcgtccggatggaggacgaacgcgacgagtccatgccgcgg accctggaaggactgaccgtggtggtgaccggttccctgccgaacttcagccgcgacgag gccaaggaagccatcctggtcaggggaggcaaggccgcgggttcggtgtccaggaacacc agctacctggtggccggggaaagcgccggcaccaagctggacaaggccgagcagctgggc atccccgtgctggacgaggacggcttccgccggctcctggccggcggcccggccgccctg gaagaaagcggtgaatcatga

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