Arthrobacter sp. NyZ413: ABCW42_08005
Help
Entry
ABCW42_08005 CDS
T11382
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
artn Arthrobacter sp. NyZ413
Pathway
artn00300
Lysine biosynthesis
artn00550
Peptidoglycan biosynthesis
artn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
artn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABCW42_08005
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABCW42_08005
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
artn01011
]
ABCW42_08005
Enzymes [BR:
artn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
ABCW42_08005
Peptidoglycan biosynthesis and degradation proteins [BR:
artn01011
]
Precursor biosynthesis
Amino acid ligase
ABCW42_08005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XQZ29852
LinkDB
All DBs
Position
1701344..1702987
Genome browser
AA seq
547 aa
AA seq
DB search
MSEQNDDVSIPAGNPPAADKPAFRPATVASVPLAAIADSLGIVLPADSGDNTSVTGVSLN
SRTVEPGDLYLALPGAARHGIDFVQEAVDAGAVAILSDEHGARQLALSDSLAVPVLVVDD
PRAAVGPVAALVYRSQPEDGPSPTLFGVTGTNGKTTTTYFINSLLRSLGKTPGLIGTIEI
LAGGAPIPSLLTTPESTDVHALLALMRERGLEAASMEVSSHALSFHRVDAVTFDVAGFTN
LTQDHLDLHGSMEEYFRTKAELFTSTRARSAVVTVDDEWGRRLAAEAGIPVTTLAVAPGT
EADWIVAAAAPRGLGTDFELRNSDGTVLRVHTGLPGDFNVANAALATTMVLASGVDVQTL
QDALDAYDPFTVSVPGRMQLVSDAPASVVDFAHNPDALARALEAVRSTEPDSRVIVVFGA
TGQRDQGKRPTMGAIAARLADVVIVSDDDPHDEDAATIRAEVLAGARAAHESEHLACEIL
EAYPRDAAIRRAVELATEKDTILVAGRGHEVWQEVKGVNLALDDRVELRAALTARGFKVS
TNERIES
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagagcagaatgacgacgtatcgatccccgctgggaatccgccggccgcggacaaa
ccggcgttccgccctgcaacggtcgcgtccgttccgctggcggccattgccgacagcctg
gggatcgtcctgccggcagactcaggcgacaacacctcggtaaccggcgtctccctcaac
tcgcgcacggttgaacccggagacctctatttggcattgcccggcgctgcccggcacgga
atcgacttcgtccaggaggccgttgacgcgggggcagttgcaatcctgagcgacgagcac
ggcgcccgccagctggcgctcagcgattcgcttgcggttccggtgctcgtcgtggacgac
ccgcgtgccgccgtcgggcctgtcgctgccctcgtctaccgcagccagccggaggatgga
ccgtctcccacgcttttcggtgtcacgggaacaaatggcaagacgaccacaacctacttc
atcaactcgctcctccgttcgctcggcaagacgccgggcctgatcgggacgattgagatt
ctggctggtggagcacccatcccgagcctcctgaccaccccggagtccacggacgtccac
gcgttgctcgcgctcatgagggaacgcggcttggaagcggcttcgatggaagtctcatcg
cacgcgctttccttccatcgtgtggacgcggtgaccttcgacgtcgcgggtttcaccaac
ctcacgcaggaccacctggacctccacggaagcatggaggaatacttcaggaccaaagcc
gaactcttcacgagtacgcgggcgcgttccgccgtcgtaaccgtcgacgacgaatgggga
cggcggctcgccgcggaggccgggattccggtgactaccttggcggttgcgcccggcacg
gaagccgactggattgtcgcggcggccgctccgcgcggacttggaacggatttcgagttg
cggaacagcgatggcaccgtcctgcgcgtccacaccggcctgcccggcgatttcaacgtc
gccaacgcagcccttgcgaccaccatggtgctcgcctccggcgtcgacgtccaaacgctg
caggatgccctggacgcctacgatccattcaccgtttccgttcccgggcggatgcagctg
gtttcggacgcaccggcgtcggtggttgatttcgcgcacaacccggacgccctcgcgagg
gcgctcgaagcagtacgttcgacggagccggattcgcgtgtcatcgttgttttcggtgcc
accggccagcgcgaccaaggcaaacggccgaccatgggcgccatcgccgcacggcttgcc
gacgtcgttatcgtcagtgacgacgacccgcacgacgaagacgcggcgaccatccgtgcg
gaggtccttgccggagcccgcgctgcccacgagagcgagcacctcgcctgcgaaatcctt
gaggcgtacccgcgggatgccgccatccggcgcgcggtggagctcgctaccgagaaggac
accatcctggttgccggccgcggtcacgaggtgtggcaggaagtcaagggagtcaacctt
gccctcgacgaccgggtggagcttcgtgcggccttgacagccaggggattcaaggtttcc
acgaacgagcggatagagtcctag
DBGET
integrated database retrieval system
