Arthrobacter sp. UKPF54-2: E7Y32_00400
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Entry
E7Y32_00400 CDS
T10403
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
artu Arthrobacter sp. UKPF54-2
Pathway
artu03030
DNA replication
artu03410
Base excision repair
artu03420
Nucleotide excision repair
artu03430
Mismatch repair
Brite
Enzymes [BR:
artu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
E7Y32_00400 (ligA)
DNA replication proteins [BR:
artu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E7Y32_00400 (ligA)
DNA repair and recombination proteins [BR:
artu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
E7Y32_00400 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E7Y32_00400 (ligA)
MMR (mismatch excision repair)
DNA ligase
E7Y32_00400 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
E7Y32_00400 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QDY88853
UniProt:
A0A5B8JIB5
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Position
complement(84135..86432)
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AA seq
765 aa
AA seq
DB search
MSTGKTAAETDTHSPDGELVPSEAVREEYEELVEQVRKHRFAYYQEDAPIISDAEFDELF
RRLETIEAMHPELVANDSPTQEVGGEVSAAFAAVEHLTRMYSLEDVFSLEELEAWIAKAE
AGIAKLGNGGNPPSWLTELKIDGLAVNLLYRDGVLIRAATRGDGFTGEDITHNVLTIKEI
PQQLKGGNFPAEMEIRGEVFIPSKAFAEFNEALIAEGKAPLANPRNAAAGSLRQKDPAET
AKRPLKMYVHGIGAREGLETGSQSDTYRQLADWGLPTSPYFEVLPGLAEVLDFIRRYGDK
RHSLSHEIDGIVVKVDDFATQRALGYTSRVPRWAVAYKYPPEEVNTKLLDIAVNVGRTGR
VTPYGVMVPVKVAGSTVEMATLHNQEVVKAKGVKIGDIVVLRKAGDVIPEIVGPVLALRD
AQDPPVRDFVMPTECPACGTPLAPAKEGDVDIRCPNARSCPAQLRERVFHLAGRGAFDIE
ALGWEAAIALTQPAEPDVAPLTTEANLFRLTPEDLAGVRIRREKRSKGVPTGEFELVPYF
YTKGTAKVPSKPTATTEKLFSELEKAKTQPLWRVLVALSIRHVGPRASRALATAFGTMDA
IRQASEEELAGVDGVGPVIAVALKEWFAEDWHREIVDSWAADGVRMEDERDESTPRTLEG
LTVVVTGSLEGFSRDEAKEAILVRGGKAAGSVSKNTSYVVAGENAGTKLDKAEQLGLPVL
DEDGFRALLAHGPAGLDGGAGADGADGSADDADVEDGEDHQEAAE
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacagggaagactgcagcagaaaccgacacccacagccccgacggggaactggtc
ccgtccgaggccgtccgcgaagagtatgaggaactggtcgagcaggtccgcaagcaccgc
ttcgcgtactaccaggaggacgccccgatcatctcggacgccgagttcgacgagctcttc
cggcggctggagaccatcgaggccatgcaccccgagctggtggccaacgattcccccacc
caggaggtgggcggggaggtctccgcggccttcgccgccgtcgaacacctgacccggatg
tacagcctcgaggacgtgttctcgctcgaggagctcgaggcctggatcgccaaggcggag
gccggcatcgccaagctcggcaacggcggcaacccgccgtcgtggctcaccgaactcaag
atcgacggcctggccgtgaacctgctctaccgcgacggcgtgctcatccgggcggccacc
cgcggcgacggcttcaccggcgaggacatcacccacaacgtcctgaccatcaaggagatc
ccgcagcagctcaagggcggcaacttcccggccgagatggagatccgcggcgaggtcttt
atcccgtccaaggcgttcgcggagttcaacgaggcgctgatcgcggagggcaaggcgccg
ctggccaacccgcgcaacgccgccgcgggctcgctgcggcagaaggacccggcggagacc
gccaaacggccgctgaagatgtacgttcacggcatcggcgcccgcgaagggctggagacc
ggcagccagtcggacacctaccgccagctcgccgactggggcctgcccaccagcccctac
ttcgaggtgctgcccggcctggccgaggtgctggacttcatccgccgctacggcgacaag
cggcacagcctcagccacgaaatcgacggcattgtggtcaaggtggatgacttcgccacc
cagcgggccctcggctacacctcccgggtgccgcgctgggccgtggcctacaagtacccg
ccggaagaggtcaacaccaagctgctggacatcgccgtcaacgtgggccgcaccggccgg
gtcaccccgtacggcgtgatggtgccggtcaaggtcgccggctccacggtggaaatggcc
accctgcacaaccaggaggtcgtcaaggccaagggcgtcaaaatcggcgacattgtggtg
ctgcgcaaggcaggggacgtcatcccggaaatcgtcgggcccgtgctggcgctgcgcgac
gcccaggacccgccggtgcgcgacttcgtcatgcccaccgagtgccccgcctgcggcacc
ccgctcgccccggccaaggagggcgacgtcgacatccgctgccccaacgcccgctcctgc
ccggcgcagctgcgcgaacgcgtcttccacctcgccggccgcggcgcgttcgacatcgag
gccctcggctgggaagctgccatcgccctgacccagcccgccgagcccgacgtcgccccg
ctcaccacggaggcgaatctgttccggctcacgcccgaggacctcgctggcgtccggatc
cgccgcgaaaagcgctccaagggcgtgccgaccggtgagttcgaacttgtgccctacttc
tacaccaagggcaccgccaaggtcccctccaagccgacggccaccaccgagaagctcttc
agcgaactcgaaaaggccaaaacccagccgctctggcgcgtgctcgtggcgctctccatc
cggcacgtggggccgcgggcctcgcgtgccctggccaccgcgttcgggaccatggatgcc
atccggcaggcctccgaggaggagctcgccggcgtcgacggtgtgggcccggtgatcgcg
gtggcgctcaaggagtggttcgccgaggactggcaccgcgagatcgtggacagctgggcg
gcagacggtgtccggatggaggacgagcgagacgaatccaccccgcgcaccctggagggc
ctgaccgtggtggtcaccggcagcctcgaggggttcagccgggacgaggccaaggaagcg
atcctggtgcgcggcggcaaggccgccggctcggtctccaagaacaccagctacgtggtg
gccggcgaaaacgccggcaccaagctggacaaagccgagcagctgggcctgccggtgctg
gatgaggacggcttccgcgcgctgctcgcgcacggcccggccggcctcgacggcggcgcc
ggggcagacggtgctgacggttcggcagacgacgccgacgtcgaggacggcgaggaccac
caggaggcggccgagtga
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