Agrobacterium rubi: G6M88_04405
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Entry
G6M88_04405 CDS
T08058
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
arui
Agrobacterium rubi
Pathway
arui01501
beta-Lactam resistance
arui01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
G6M88_04405
01503 Cationic antimicrobial peptide (CAMP) resistance
G6M88_04405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arui02000
]
G6M88_04405
01504 Antimicrobial resistance genes [BR:
arui01504
]
G6M88_04405
Transporters [BR:
arui02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
G6M88_04405
Antimicrobial resistance genes [BR:
arui01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
G6M88_04405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QTF99688
UniProt:
A0AAE7R9C5
LinkDB
All DBs
Position
1:911768..915094
Genome browser
AA seq
1108 aa
AA seq
DB search
MNFSAWSIRNPIAPLLCFVLLMFLGVKAFYDLPITRFPNIDVPVVAITVTQSGASPSELE
AQVTKEVEDAVASISGIDEIQSTVTDGQSLTTVLFRIEKPTEEAVQDTKDAIDKIRSELP
SDIEEPVVSKIDVEGQAIQTFAVSSPNMTLEELSWFVDDTIKRALQGQAGVGKIDRYGGA
DREVRVSLNPAKLDAYGITAADVNEQLRGTNIDLGSGRGQVAGNEQTIRTLGDARDVAQL
SNTTIALSSGRFVTLSELGTITDTYEEPKSFSRFNGNPGVTFAVFRSKGASEVSVAETVA
QNLDKVRTDHPNVSIEMVDDSVYFTYGNYEAALHTLVEGSILAVIVVLLFLRNWRATLIA
AVALPLSAIPTFWVMDVLGFSLNLVSFLALTLATGILVDDAIVEVENISRHIKMGKSPYR
ASLEAADEIGLAVIATSFTIIAVFVPVSFMPGVPGQYFIQFGLTVAFSVFFSLMVARLIT
PLMAAYLMRSDDAVDDHHDNDGWLMKAYTRMVSATTSRWWARYLTLIGAIGFLVGSIVLL
SGVPGSFLPPDDASRVVLSVELPPNATLEETDATTSKINEAIRDINGVESIFILGGASPK
GDLELRRATVRVILQHIDHSLLKTLVNDGLGSIPLIGQYLPKVQDNGRTRPQWDVERDIF
AKVNTIPDVRIIKLNDRGERELSFNFLSSSEEDLQKAVSTLESHLRASPILANVSSEGAL
PRPELQIRPRKDEIARLGITPQQISQTVRVATIGDIDAQLTKISLDDRQIPIRVQASLDV
RRDLASIRALKIKTAAGATVPLYSVADIDYSEGPSSIKRNDRNRVVSIGSDVPFGTALDT
SSAEFRRIVAETQLPPTVRLAESGDAKVQGEMLRGFTNAMLLGLLLVLVVLILLFKDVIQ
PFTILLSLPLAIGGVAVALIITNNALSMPVLIGILMLMGIVTKNAILLVDFAIEMRRHGM
ERVHAMVEAGRKRARPIIMTSIAMSAGMLPSALGVGEGGSFRSPMAIAVIGGIIVSTVLS
LVVVPAFFLIMDDLSMLLAHLFGRFIGKKEEEHPVLSNEELSEAARTNQDAVSGLEERLA
NIEQKNGTSPKNPGNSNNVLRLPPLAAE
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgaacttttctgcatggtccatccgcaacccgattgcgccgctgctgtgctttgtgctt
ttgatgtttctgggcgtcaaggcgttctacgatctgccgatcacgcgtttccccaatatc
gacgtgccggtggtggcaatcaccgtcacccagagcggagcctcaccatccgagcttgag
gcacaggtcaccaaggaagtcgaagacgcggttgcctccatcagcggcatcgatgagatc
cagtcgacggtaaccgacggtcagtcgttgacgacggtgttgttccgcatcgaaaaaccg
accgaagaggcggttcaggacaccaaggacgccatcgacaagattcgcagcgagttgccc
tcggatatcgaggagccggttgtcagcaagatcgacgtcgagggacaggcgatccagacc
tttgctgtctcgtcgcccaacatgacgctggaagagctctcctggtttgtggatgacacg
atcaagcgagcacttcagggtcaggcgggcgttggcaagatcgaccgttacggcggtgcg
gaccgcgaagtgcgggtgtcgctcaacccggccaaactcgatgcctatggcattaccgcg
gccgacgtgaacgaacagctgcgtggcaccaatatcgacctcggctccggtcgcggacag
gtggcgggcaacgaacagaccattcgcacgctgggtgacgcccgtgatgtggcccagctt
tccaacaccactattgcgctgtccagcggccgtttcgtcacattgtcggaactcggtacc
atcaccgatacctatgaggagccgaagtccttctcacgtttcaacggcaatccgggcgtg
accttcgccgtcttccgttccaagggtgccagcgaagtgtcggttgcggaaaccgtggcg
caaaatctggacaaggtgcgcacagaccacccgaacgtctcgatcgaaatggtcgatgac
tccgtttatttcacctatggcaactatgaagccgcccttcacacgctggtggaaggctcc
attctcgccgttatcgtcgtcttgttgttcctgcgcaactggcgcgcgaccttgattgct
gccgtggcgctgcccctgtcggccattcccaccttctgggtcatggatgtcttgggcttt
tcgctcaatctcgtcagcttcctcgctttgacgttggccaccggtattctggtggacgat
gccatcgtggaggtggagaacatctcccgccacataaagatgggcaaatcgccctaccgc
gcctcgctggaagccgccgatgaaatcgggcttgctgtgattgccaccagtttcaccatc
atcgccgtcttcgtgccggtgtccttcatgccgggcgtacccggccaatacttcatccag
ttcggcctcaccgtcgccttttcggtgttcttctcgctcatggtcgcgcgtcttatcacc
ccgttgatggccgcctatctcatgcgttccgatgatgccgtcgatgaccaccacgacaat
gatggctggttgatgaaggcctatacgcggatggtgagcgcaaccacgagcagatggtgg
gcgcgttacctgacactcatcggggccatcggcttcctcgtcggctcgatcgttcttttg
agcggcgtgcccggcagcttcctgccgccggacgacgcctcgcgcgtcgtgctctctgtc
gaacttccgcccaatgcaacgctggaagaaaccgacgcgacgacctcgaagatcaatgag
gcgatccgcgatatcaatggcgtggaaagcatcttcatcctgggtggcgcatcgccaaag
ggtgatctggaattgcggcgcgcaacggtgcgcgtcattctccagcatatcgaccactcc
ttgctgaaaacgctggtcaatgacggattgggctccattccgctgatcggccagtatctt
cccaaggtgcaggacaacggcagaacgcgcccgcaatgggatgtggagcgggatattttc
gccaaggtgaacacaattccggatgtgcgcatcatcaaactcaatgaccgcggcgaacgg
gaactgagcttcaacttcctgtcctcgagcgaagaggatttgcaaaaggcggtcagcacg
ctggaatcgcatctgcgcgcctcgcccatcctcgccaatgtcagctcggaaggcgcactt
ccacgccccgaactacaaatccgcccacgcaaggatgaaatcgctcgcctcggaatcacg
ccgcagcagatatcgcagaccgtgcgcgtggcgaccatcggcgatatcgatgcgcagttg
acgaagatttcgctggatgatcggcaaatccccatccgcgtacaggcatcgctggatgtc
cgacgcgacctggcttccatccgcgcgctgaaaatcaagacggcggcaggtgccaccgtt
ccgctctatagcgtggccgatatcgactattcggaggggccaagctccatcaagcgcaac
gaccgcaaccgcgtggtgtccatcggctccgatgttcccttcggcacggcgctggatacg
tcgtcggccgagttcaggcgcatcgttgcggaaacgcaattgccgccaaccgtgcgtctt
gccgaaagcggtgacgccaaggtgcaaggcgaaatgctgcgcggcttcaccaatgccatg
ttgctcggcctgctgctggtgctggtcgttctcatcctgctgttcaaggatgtgatccag
cccttcaccattctgctgtcgctaccgctggccatcggtggtgtggcagtggcgctcatc
atcaccaacaacgcgctctccatgcccgttctcatcggcatcctgatgctgatgggcatc
gtgacaaagaacgccattctgctggtggatttcgccatcgaaatgcgccgccacggcatg
gagcgggttcatgccatggtggaagcgggccgcaagcgcgcgcgtcccatcatcatgacc
tcgattgccatgtcggcgggcatgttgccgtcagcacttggtgtcggcgaaggcggctcg
ttccgctcgcccatggccatcgctgtgatcggcggcatcattgtctcgacggtcctgtct
ctggtcgtcgtcccagctttcttcctcataatggatgacctgtcgatgctcctcgcccat
ctcttcggccgtttcattggcaagaaggaagaagagcatccggttctctccaatgaggaa
ctgtcggaagcagcgcgtaccaatcaggacgccgtatcgggccttgaagagcgcctggca
aacatcgagcagaaaaacggaacgagcccaaaaaatcccggcaattccaacaatgtcctg
cgcctgccaccactcgccgcagaataa
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