Agrobacterium rubi: G6M88_05855
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Entry
G6M88_05855 CDS
T08058
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
arui
Agrobacterium rubi
Pathway
arui03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G6M88_05855 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arui03400
]
G6M88_05855 (nth)
Enzymes [BR:
arui01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G6M88_05855 (nth)
DNA repair and recombination proteins [BR:
arui03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G6M88_05855 (nth)
Prokaryotic type
G6M88_05855 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QTF99948
UniProt:
A0AAE7UNW6
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All DBs
Position
1:1213462..1214232
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AA seq
256 aa
AA seq
DB search
MTIAKKRSSTQTPKKSNSTARRKPAKVKTLYSHDELVEIFRRFSIQRPEPKGELEHSNPF
TLVVAVALSAQATDVGVNRATRGLFAVADTPQKMLELGEEQLIGYIKTIGLYRNKAKNVI
ALSQMLIDQFGGEVPRTREELVMLPGVGRKTANVVMSMAFGVPTLAVDTHVFRIANRLCL
APGKTPDEVEERLVKIIPDEYLFHAHHWLILHGRYCCKARKPECERCVIADICKAPEKTC
DIPAPLVELPAQLVGE
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgacaatagccaagaaacgatccagcacccaaacgccgaaaaagtcaaattccacggca
cgccgcaagcccgcgaaggtcaagacgctctattcgcatgatgagctggtcgagattttc
cgtcgcttttccattcagcggcccgagcccaagggcgagctggaacactccaacccgttc
acgctggtggtggccgtggcgctttcggcgcaggcgacagatgtgggcgtcaaccgcgcg
acacgcggcctgtttgcggtggccgatacgccccagaagatgcttgagctgggcgaagag
cagctgatcggctacatcaagaccatcgggctttatcgcaacaaggccaagaacgtcatt
gcgctgtcgcagatgctgatcgaccagtttggtggcgaggtgccgcgcacccgcgaagag
ttggtgatgctgccgggcgtgggacgcaagaccgccaatgtggtgatgtcgatggcgttc
ggggtgccgacgctggctgtcgatacgcatgtgtttcgcattgccaaccggctctgtctg
gcgccgggcaagaccccggacgaggtggaagagcggctggtgaagatcattcccgacgaa
tatctgttccacgcgcatcattggctcattctgcacgggcgctactgttgcaaggcgcgc
aagccggaatgcgagcgctgcgtgattgcagacatctgcaaggcgccggaaaagacctgc
gatattcccgcacccctggttgagttaccggcccagctggttggtgaatga
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