Luidia clathrata (European starfish): 117288585
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Entry
117288585 CDS
T10152
Name
(RefSeq) F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
arun Luidia clathrata (European starfish)
Pathway
arun04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117288585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arun04131
]
117288585
04121 Ubiquitin system [BR:
arun04121
]
117288585
Membrane trafficking [BR:
arun04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
117288585
Ubiquitin system [BR:
arun04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117288585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_SCAP
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_IFT122_1st
F-box-like
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_Vps41
F-box
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_IP5PC_F
WD40_like
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
117288585
NCBI-ProteinID:
XP_033625389
LinkDB
All DBs
Position
3:2224353..2228199
Genome browser
AA seq
458 aa
AA seq
DB search
MADGLVEGVSLDEVRSFLTLDIPSVLPHELTAQIFCLLSAKDLCSASLCSRVWRERSNND
QIWHRLCRGKGWQRYSEVVDLAHEVPFSPSYTDISKTTPTFHSDSIIDKCKGLTPTCHWK
QIYMRAWHLEQNWHRGRYRIAPVLRRHQERVTCLDSDGKILISGSLDGTVCVWDLLTSAF
LCRLDGHTDAVSCLKLKDDICVTGCQDTLIRVFNPHSACCLMTLNGHQAGVECIFIVGDT
IVSASNDKSVRVWSLSEGICTQILRGHTDDIESLKCLGNLVVSTSWDTTLRVWDISKKGE
CLHILNGHTEVVFCCEFNERIIVSGGGDSVVKIWDTTSGACLRTLEGHEGDVYCLCFNDD
IIASGSADSTVRLWSHSGTRLRVMQEHIGVVRCLCLLGNRLVSGGDRKKIVVWDATNGNL
LNVVHRNPSLLHIMWMNDTRLVTASPESPGTLTVMSYW
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggattagttgagggagtttcattggatgaggttcgctcatttctaacctta
gacatcccctcagtcctcccacatgaattgacagcacaaatattctgtttgctgtccgct
aaagatttatgctcagcttcattgtgttcaagggtctggcgtgagcggtcaaataatgac
caaatctggcatcgactctgtcgaggtaaaggttggcaacgctatagtgaggttgttgac
cttgctcatgaagtccctttcagcccatcatacactgacatttctaagaccactccaaca
tttcactctgatagcatcatcgataagtgcaaaggccttaccccaacatgccactggaag
cagatttacatgagagcgtggcacttggaacagaattggcatagagggcgctatcgcatc
gctccagttctgcgtaggcatcaggagagagtgacgtgtttagacagcgacgggaaaatc
ctcattagtgggagtttggatgggactgtgtgtgtatgggaccttctgacatcggcgttt
ttatgtagactggatggacatactgatgctgtatcatgcttgaagctaaaggatgacatc
tgcgtgacgggttgtcaggacaccctcatccgtgtctttaatcctcactctgcgtgttgt
ttgatgacacttaacggtcatcaagctggcgttgaatgcatctttatcgtaggggacact
attgtcagtgcgtccaacgacaaatcagtcagagtatggtcattaagtgaaggaatctgt
acccagattctcagaggtcatacagacgatattgaaagtttgaaatgcttgggtaattta
gtggtgagtacatcctgggatactactcttagagtgtgggatatcagtaagaaaggggag
tgtttgcatattttaaatggacatacggaggtcgtattctgctgtgaattcaatgagcga
atcatcgtaagcgggggcggagacagtgtggtcaagatctgggacacgacgtcgggggcg
tgcctacgaaccctggagggtcacgagggggatgtctactgtctgtgttttaatgatgac
atcatcgcttccgggtcagcagacagtacggtcagactttggtcgcacagcgggactcgg
ctgagagtcatgcaagaacacatcggtgtcgtgcgttgtttatgtctccttggcaacagg
ctggtatcgggcggggaccgtaaaaaaatcgtggtgtgggacgcgacaaacggaaacctg
ttaaatgttgtacatcgcaatcctagtctgctccacatcatgtggatgaatgatacacgt
ctggttacggcctctcccgaatcaccaggtacattgactgtaatgagctattggtga
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