KEGG   Luidia clathrata (European starfish): 117289000
Entry
117289000         CDS       T10152                                 
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B'-like
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
arun  Luidia clathrata (European starfish)
Pathway
arun03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:arun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117289000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arun03019]
    117289000
   03041 Spliceosome [BR:arun03041]
    117289000
   03032 DNA replication proteins [BR:arun03032]
    117289000
Messenger RNA biogenesis [BR:arun03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     117289000
Spliceosome [BR:arun03041]
 Complex A
  U1 snRNP components
   Sm proteins
    117289000
  U2 snRNP components
    117289000
 Complex B
  U1 snRNP components
    117289000
  U4/U6.U5 tri-snRNP components
    117289000
 Complex C
  U2 snRNP components
    117289000
DNA replication proteins [BR:arun03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     117289000
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 117289000
NCBI-ProteinID: XP_033625776
LinkDB
Position
4:complement(16344365..16352033)
AA seq 218 aa
MTVGKSSKMLQHINFRMRISLQDGRTFIGTFLAFDKHMNLVLGDCEEFRKIKPKSSKMPE
REEKRALGLVLLRGENLVAMTVEGPPVTSGPRVPLSGVGSGPGMGRAAGRGVPAHAASAA
AAPAGLAGPVRGIGGPSQQIMAPGGIGGPPQFSGPPGRGMPVRPPMGRGMPPGMMPPGMR
PGMPPLMGRGMPPPGMGMRPPMGMRGPPPPGMRPPPRN
NT seq 657 nt   +upstreamnt  +downstreamnt
atgacggtgggcaagagctccaagatgttgcagcacatcaacttccggatgcggatatcc
cttcaggatggccgcactttcatcggaacgttccttgcctttgataaacacatgaatctg
gtgctcggtgactgtgaggagttcaggaagatcaaaccgaagagttctaagatgccggag
cgagaggagaagcgagcgttaggcttagtactcctcaggggagagaatctggtggccatg
acagtggaaggtcctccagttacatctggaccccgtgttcccttgtcaggtgttggcagt
ggtcctggtatgggccgtgcagcaggcaggggagtacctgcccacgcagcgtcggccgca
gcagcaccggctggacttgctggaccagtacgaggcatcggaggaccatcacaacagatc
atggcacctgggggaataggcggaccaccacaatttagcggccctcccggcagagggatg
ccagtaagacctccaatgggtagaggaatgccaccaggtatgatgcctcccggcatgaga
ccaggaatgcctccactcatgggaagaggcatgccaccaccaggaatgggaatgcgacca
ccaatgggaatgagaggacctccaccacctggcatgagaccgcccccaagaaattag

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