Luidia clathrata (European starfish): 117291703
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Entry
117291703 CDS
T10152
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03450
Non-homologous end-joining
Brite
Enzymes [BR:
arun01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
117291703
DNA repair and recombination proteins [BR:
arun03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
117291703
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
117291703
NCBI-ProteinID:
XP_033629445
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Position
6:complement(11954897..11982122)
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AA seq
936 aa
AA seq
DB search
MSDGRENPSTSTPAAATAGASEDAPTVASHIPFAELAGFLEKVQKKHGGEAKKQMFREFL
NKWREFHKHLHEDDPTTKDNFYPVMRLLLPQLERERIAYGIKEHTLAKLYIEILGLGKES
QDAKKLINYRAPTAKQEAGDFASVAYFVLRNRCPEKGSLTIQDVNTCLDAIAGSNAAKKK
DVVKKNFMHLLRNTSALEQKWLVRMIMKDMKSGLSQVAIFHIFHPDAEDFFNVTNNVSKL
CADLNDPRVRMNEVGISVFSAFSPMLGMRANTNQVEKLMEHKPFFIETKLDGERMQLHKE
GNSYKYFSRRSHDYSRSFGETPDDGSLTPYIANCFKRDVRNCILDGEMMAYNPETKTFMT
KGENFDIKTMRDDQDLQVCYCVFDILLFNDKKLANLPLHERVQYISKVFNPVDGRLHIVE
RREANSKLDVVTALNDAIDSREEGIMIKNPNTAYRPDRRKGSGWLKIKPEYVDNLMDELD
LLIVGGYFGKGIRSQMVSHFLLAVAEPSKVPGEHPTNFIAFTKVGSGYSLKELYDFNQRL
LPHLKVFKKERPPSFLQFTKEKPEMYVKPENSFILQVKATEISSSSSYPTGCTLRFPRVE
KVREDKEWHQCMTKEELDNLRQSSEGKLATRHAGMGGEDEVPSKKKKASSRIAKPVGVAA
RFMAADVSEVTKVSEMFADREFCIVNNPTSHSKAELEKKIVEYGGQVAQNPGGETFCVLA
NKINLKVRNIISSDIYDVVSTDWLLKCLDAQKCLPWLPSHMIHVSPETKVQFSLLYDRHG
DSYTEDVDTDKLKEIFEKVGKEGMYPSLGNESIAELEQQYFPGESPLGLFRLCKVYMDSC
LVIGDESTHIKDCSLDLVTLELRFYGATISPEMDEDVTHVVLDRIDKTRLPSYKMLMRER
QRKFHLVSPEWVYACIDSGKILSERRFELGLPAAVV
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatggaagagagaatccatcaacgtcaactccagcagcagcaactgcaggagct
agtgaggatgcaccgacagtcgccagccacattccttttgctgaacttgctggattcttg
gagaaggtacagaagaagcacggcggcgaggccaagaaacagatgttccgagagttcctt
aacaagtggagagagtttcacaaacatcttcatgaggatgatccaacgacgaaagacaat
ttctatcctgtgatgagactgttactgccgcaactggaaagggaaagaatcgcatacggt
atcaaggagcataccctagccaagttgtacattgaaattcttggcttgggtaaagaaagc
caagatgctaagaagttaatcaattacagagcaccaactgccaaacaggaagctggagac
tttgccagtgttgcatattttgtgctcagaaacagatgcccagaaaaggggagtttgacc
attcaggatgtcaatacgtgccttgatgccatagctggaagcaacgctgcaaagaagaag
gatgtagttaagaagaacttcatgcacctgttaaggaataccagcgcactggaacagaag
tggctggtcagaatgatcatgaaggatatgaagtctggcctgagtcaagttgcaatcttc
catatcttccatccagatgcagaagacttcttcaatgtcacaaacaacgtatctaagttg
tgtgctgacttaaatgatcctcgggtcagaatgaatgaggttgggattagcgtattttca
gccttcagcccaatgcttggaatgagagccaacacaaaccaggttgagaagttaatggag
cacaaaccattcttcatcgagaccaaacttgatggagagaggatgcagcttcacaaggaa
ggaaactcttacaagtacttctcaagaaggtcccacgactattcccgttcctttggcgag
actccagatgatggcagtctgacaccatacattgcaaactgcttcaaaagggatgttcgt
aactgcatactggatggagagatgatggcctacaatccagaaacaaaaaccttcatgacc
aagggagagaattttgatattaagacgatgagggatgaccaagatcttcaggtatgttac
tgtgtctttgacattcttctcttcaatgataagaaacttgccaaccttccgctccatgag
agggtacagtacattagcaaggttttcaatccagtggatgggagacttcacattgtagag
agaagggaagcaaattcaaaactagacgttgtgacagccttgaatgatgccattgatagt
agagaggagggaatcatgatcaagaatcccaacacagcataccggccagacaggcgaaaa
ggcagtggatggttgaaaatcaaaccagaatacgtggacaatttgatggatgaactggac
ttgttaatagttggaggctactttggtaaagggatccgctcgcagatggtatctcatttt
ctattggctgttgccgaaccatccaaagtacccggtgaacatccaaccaactttatagcc
ttcacaaaggttggctcagggtactcgttgaaagagttgtacgatttcaatcaacggctt
cttcctcatctgaaagtcttcaagaaagagcgccctccatcattcttacaatttacaaag
gaaaaacctgaaatgtacgtgaagccagaaaactcttttatccttcaagtgaaagccaca
gaaattagctcatcgtccagttatccaacgggctgcacgcttcgtttcccgcgggttgag
aaggtccgagaggataaagaatggcatcagtgcatgacaaaagaggaactggacaacctc
agacagtcttcggaggggaagttagcaacaaggcatgctgggatgggcggtgaagatgaa
gtcccaagtaagaagaagaaggcgtcgtctaggatcgccaagccagtgggagtggctgct
cgcttcatggcagctgatgtgtcagaggtcacaaaggtatctgagatgtttgcagatcgt
gagttctgcatcgtcaacaatcccaccagccattctaaggccgagttggagaagaagatt
gttgagtatggaggacaggtggctcagaaccctggcggtgaaacattctgtgtcttggcc
aacaagatcaatcttaaagtcagaaacattatcagctctgacatctatgatgttgtcagt
acggactggctgttaaagtgtttggatgcacagaagtgccttccatggttaccaagtcac
atgatccacgtctccccggagaccaaagtccagttctctttgctgtatgatcgtcatggt
gatagctacactgaggatgtagacactgacaagcttaaggaaatatttgagaaagttgga
aaggagggcatgtacccctcgttaggaaatgaatctatagccgagctagagcagcagtat
ttcccaggggaatcccctctaggactcttcaggctgtgcaaggtctacatggattcgtgt
ctggtcattggtgatgagtcaactcatatcaaagactgcagtctggacttggtcaccttg
gagctacgcttctacggtgcaaccatctcacctgagatggacgaagatgtcacacacgta
gtgttggatagaatagacaaaacccgtcttccttcctacaagatgctgatgagagaaagg
cagcgcaagttccacctggtatcgccggaatgggtgtatgcttgtatcgactccggcaaa
atactatcagaaagacgttttgagttgggactaccagcagcagtcgtctag
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