Luidia clathrata (European starfish): 117300045
Help
Entry
117300045 CDS
T10152
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117300045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arun03041
]
117300045
Spliceosome [BR:
arun03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
117300045
Complex C
U5 SnRNP specific factors
117300045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Septin
Roc
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
117300045
NCBI-ProteinID:
XP_033639605
LinkDB
All DBs
Position
15:1876774..1901347
Genome browser
AA seq
971 aa
AA seq
DB search
MDADLYDEFGNYIGPELESDSDDEESEEERPEPQLDGDDDDDEEPMESGDISQAVVLHED
KKYYPTAEEVYGPDVETIVHEEDTQPLTDPIIAPVKQKKFTMTEQELPVTTYDMEFLADM
MDNAELIRNVTLAGHLHNGKTSFVDCLMEQTHPELQAKEDGGIRYTDTLFTEQERGVSIK
AQPVTLVMPDSKGKHYLMNIMDTPGHVNFSDEVTASFRLSDGVVIFVDAAEGVMLNTERL
IKHAIQEQLAVTICINKVDRLVLELKLPPADAYYKLRNIITEINGILSVFSDEAEPLMVS
PLLGNVCFASSQYSVCFTLQSFAKIYADTYGGIEYQEFAKRLWGDIYFNPKTRKFTKKSP
VSTAQRSFVEFILEPMYKLFAQVVGDVDSTLPGVLDELGIHLTKEEMKMNIRPLLKLVCS
KFFGDFTGLVDMCVKHIPSPVAIAKKKIEHLYTGPMDSDLADTMVECDPEGPLMLHTTKM
YSTEDGVSFHAFGRVMSGTINANQEVRILGENYTIEDEEDSRISLVGRLWISEARYKIEV
NRVPAGNWVLIEGVDEPIVKTATITESRGLDEVYIFRPLKFNTSSVIKIAVEPVNPSELP
KMLDGLRKVNKSYPLITTKVEESGEHVVLGTGELYLDCVMHDLRKMYSEIDIKVADPVVA
FCETVVETSSLKCFAETPNKKNKLTMIAEPLEKGLAEDIENEVVQINWNRKRLGEFFQTK
YDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLNSVKDSIVQGFQWGSREGPLCD
EPIRNVKFKILDAVIAGEPIHRGGGQIIPTARRVAYSAFLMATPRLMEPYCFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVF
HHWQIVPGDPLDKSIIIRPLEPQPAMHLAREFMIKTRRRKGLSEDVSINKFFDDPMLLEL
ARQDVMLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgatctgtatgatgagttcggcaactacatcggcccggaacttgagagtgac
tctgatgatgaagagtcggaggaagaacgaccagaacctcagttagatggggacgacgac
gatgatgaagagccaatggaatcgggcgatatctcacaggctgtcgttctccatgaagat
aagaaatattacccgacggccgaggaggtttacggtcctgatgtggagacaattgtacat
gaagaagacacacaacctctcacagatcctataatcgcaccggtgaaacagaagaagttt
acaatgacagaacaagaattacctgtgacaacctacgacatggaattcctggcagacatg
atggacaacgcagagctcattagaaacgtcacattagctggtcatctccataatggcaag
acgtcatttgttgattgcttaatggagcaaactcatccagaattacaagccaaagaagat
ggagggatcagatacacagatacactcttcacagaacaagagaggggtgtaagcatcaag
gcccagcctgttacgttagtaatgccggacagtaaaggcaaacactacctcatgaacatc
atggacacacccggtcatgtaaatttctctgatgaggtcacagcatcattccgtctcagc
gacggtgtagtgatcttcgtggatgctgcggagggcgtcatgctgaacacggagcgtctc
atcaaacacgccatacaggaacagctcgctgtcacgatctgcatcaataaggttgataga
ctggtgctggagttgaaactcccacctgcggacgcctattacaaattgagaaatattatc
acggagattaatgggattttgagtgtgttctctgatgaggcagaacccttgatggtgtca
ccgttgctaggcaacgtctgttttgccagctcacagtacagtgtgtgcttcacgttgcaa
tcattcgctaagatctacgcagatacctacggagggattgagtatcaagagtttgccaag
aggttatggggagacatctacttcaacccaaagacacggaagtttaccaagaagtctcca
gtcagtactgcacagcgtagttttgtggagttcatacttgaaccgatgtacaaacttttt
gcacaggttgtaggagatgtagattcaacattaccaggtgttctggatgagctgggaatc
catctcactaaggaagagatgaagatgaacattagaccgctcctcaaactcgtctgcagt
aaattctttggcgattttacagggttggttgatatgtgcgttaagcacatcccgtctcca
gttgcaatcgcaaagaagaagattgagcatctttacaccggacccatggactcggacttg
gctgacaccatggtggaatgcgatcctgagggtccactgatgctccacacaactaagatg
tacagcacagaggatggagtaagcttccatgcttttgggcgggtaatgagcggaacaatc
aacgctaaccaggaagtgagaatccttggtgagaattacaccattgaggacgaggaagac
tcaaggataagtctcgtcggaagactgtggatctcagaagcaagatataagattgaagta
aacagagtaccagcaggaaactgggttttaattgaaggcgttgatgaacccatcgtcaag
acggcaacaatcacagagagcagaggtttagacgaggtttatatcttccgacctctgaag
ttcaacaccagctcagtaatcaagattgccgtagagccggtcaacccctcggagcttcct
aagatgttggacggactgagaaaggttaacaagagttaccctctcatcactacaaaggta
gaagagtctggtgagcatgtggttctcggaacgggcgagttgtacctagactgtgtcatg
catgacctcaggaaaatgtactcagaaatagatatcaaagttgctgatccagtcgttgct
ttctgcgagacggtggtcgagacatcatctctgaaatgttttgctgagacaccaaacaaa
aagaacaaactgacaatgatcgctgagcctcttgagaagggcctagctgaagacatcgaa
aatgaagtggtacaaatcaactggaacaggaaacgtttgggagagtttttccagaccaag
tatgactgggatttattggctgctcgttctatttgggcgtttggtcctgatgcaaccggc
cccaatattctggtagatgatacgctcccatctgaggttgacaaggcattactgaactca
gtcaaggacagcattgtgcaaggattccagtggggatcaagagagggcccactgtgtgat
gaaccaattcgtaacgtgaagtttaagattctggatgctgtgattgccggggagccgatc
catcgtggtggaggtcaaatcattcctacagcaagacgagtcgcatactctgcattcctc
atggccactcctcgcctaatggagccctattgttttgttgaagttcaagcaccggctgat
tgtgtatctgcagtttacacagtactggcaaggagaagaggtcacgttacccaggatgca
cctgttccagggtcaccgttgtatacaatcaaggccttcattccagcgatcgactcgttt
ggattcgagacggatctgagaactcacactcaggggcaggcgttctgtctctccgtcttc
catcactggcagatcgtacctggtgatcccctagataagagtattatcattcgacctcta
gaaccacaacctgccatgcaccttgctagagaattcatgattaagacacgacgaaggaag
ggattgagtgaggacgtcagcatcaacaagttctttgacgatcctatgttgttggagttg
gctcgacaggatgtgatgttaaactatcccatgtag
DBGET
integrated database retrieval system
