Luidia clathrata (European starfish): 117303999
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Entry
117303999 CDS
T10152
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arun04040
]
117303999
Ion channels [BR:
arun04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117303999
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
ATG16
FUSC
Prominin
PepSY_TM
TMEM237
Motif
Other DBs
NCBI-GeneID:
117303999
NCBI-ProteinID:
XP_033644367
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All DBs
Position
20:9929014..9941465
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AA seq
1030 aa
AA seq
DB search
MDNEAFELESKKEKGLPSNGHAFLPNGNLGGNEEEAIGMPSSPGVENSEDGRYELVRGVA
DSGNGQKLDELLTEWAELGWIRDWRNEEGLTLYADAITDGYMDVINTLLHHDIPLGDALL
RAIDAELGEAIQAICDYIQPHQDISESTLNGNCDNDDFHPAVTPLVLAAQRNDFNTVQLL
VGIGGKLEEPRLAQGGDMTLTQATSYLQIYRALSQPAFILATQVDIFGHLFQLSHKLRTL
SQLWEDFGAKYDEMASDVDAFAGEMLGQSSSTEEILALFRFHNTNKYRNKEGAQHPLSKM
FEAIKYQQKQFIAHPHSQKAIIAQFYQNLLSWNEKGVLHQILLALLVILGYPIICLLYII
FPVSKVVNFARLPYVKMLMKMGSGLTFLAFILAASVLDRNRYKATFWALHWFILIWAIGK
SLFFCATGLMWSHMKVISTKGIVKHLSDSANIQDAFVLALFFVVFFLRWNGRLIIAPNVA
LRPRRAAVNGTFLNSPSYIELQDHVNLALSSLHGKLAGTTVEGVGEIAMKVLSSCWLDPT
ETTVVPLTTSSSEFNSYLQDHVEFDSYHPEIIAEGLFGIVITVSFLRLMNVLLVSEAIGP
LRISFGAMAGDVGKFLILFSVVWFAFSIGLSQVHHSAVLWTERKCRENENDPCERTVGFA
TLFVSLFDLYWTLFGIVEKDSVRLPPGFQLQETIGTLMFAAYHVVGVLVLLNALIGMLSN
TYMKVEQNADTEWKFNRTVVWGAYLHPLDTLPPPFNLIPSIKNVIRFLRDIVGMWLKCAR
RKRVNRHVLHQIRSRYIQGNLSVASTNSDSIRPRDVQLLRNDIQALRHFAEIRLETIDKS
LDTSNGKASGLRKKLEDLGPLGSHVTEVLSKSVALTDNADSLRAQTDQLEEEQATEIVDR
DHESADLRDRIAEQISAMEQLRSDHAAEVREMDRHAESLNGIIRRLNDEVVARERHESAL
ANNIIRLEGEKTSLGLELDDVNEEKTKLGVEVARLTGQLQHSRLGFMQRVATVIEDRVKA
PGDQGEGPSN
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggataacgaagctttcgaactggaaagtaagaaggaaaaaggcttgccgtcaaatggg
catgcctttctaccgaacgggaacctcggaggaaacgaggaggaggcgatcgggatgccg
tcttctcccggggttgagaactctgaagacggacggtatgagttggtgcgaggggtggct
gactccgggaacggtcagaaactagatgagcttttgacggagtgggcagaacttggatgg
atacgggattggagaaacgaagagggtttgactctttatgctgacgccatcaccgatgga
tatatggacgttatcaacacacttcttcaccacgatattccgctaggggacgccctccta
cgagccattgatgctgaacttggtgaagcaatccaggcaatatgtgactatattcaacca
catcaggacatttccgagtccacacttaatggtaactgcgacaacgatgacttccaccct
gctgttacgcctctggtcctggctgcccaacggaatgacttcaacacagtgcagttactg
gtgggaattggcggaaagcttgaggaacctcgacttgcccaagggggcgatatgaccctc
acccaggccacttcatatctccagatttaccgcgcactgtcccagccggccttcattctg
gccacgcaggtcgacatcttcggacacctcttccagctaagccacaaactccggacattg
agccagctttgggaagactttggggcaaagtacgatgagatggccagcgatgttgatgcg
tttgccggggaaatgctcgggcagtccagctcgaccgaggagatcttggcactgtttcgt
tttcacaataccaacaagtatagaaacaaagaaggggcacaacatcctctctccaagatg
ttcgaagcgatcaagtatcaacaaaaacagttcatagctcatcctcattcccagaaggct
atcattgcgcagttctaccagaaccttctgagctggaacgagaagggtgtccttcatcaa
attttgctcgcacttttggtaattctggggtatccaatcatctgcctgctctacataatc
ttccccgtttccaaggttgtcaacttcgcccggctcccgtatgttaagatgctgatgaaa
atgggttctggtctgactttcttggcttttatccttgcggcgagtgttctggacagaaac
cgctacaaggcgaccttttgggcacttcattggttcattcttatatgggccataggtaag
tctctctttttttgtgcaacagggttgatgtggtcgcatatgaaggttatatcgactaaa
ggaatagtgaaacatttgtcagacagtgcgaacattcaagacgcttttgtattggccctc
ttctttgttgtgttcttcctccgctggaacggaagattaattattgcaccgaatgtagct
cttcgtcccagacgcgctgccgtcaacggaacattcctgaacagtccgtcctacatagag
ttgcaagaccacgtgaatctagccctgagcagtctccatggcaaactggcaggcacgaca
gttgaaggcgtgggggagattgcgatgaaggtgctgtcaagctgttggcttgaccccacg
gaaacgactgttgttccgttgacgacgtcgtcgtcggagttcaattcttacctgcaagat
cacgtggaatttgactcctaccaccccgagatcatcgccgaaggtctgttcgggatcgtc
ataaccgtgtctttcttgcgattgatgaacgtcctcctggtcagtgaggcaattgggccg
ctgagaatctccttcggagctatggccggtgatgtagggaagtttcttatcttgttttcg
gtggtctggttcgccttcagcatcgggctgtctcaggttcaccactcggcggtgctatgg
acggagcggaagtgccgtgaaaacgagaatgatccgtgcgagcgcacagttggatttgcc
acgttgtttgtgagtctgtttgatctctactggacattgtttggtatcgtggagaaagat
tcagttcgtctacctccgggcttccaacttcaagagaccatcggcaccttaatgtttgcc
gcctatcacgtcgttggcgtactcgtactgttaaacgccctcatcggcatgctctccaac
acttacatgaaggttgagcaaaatgccgacactgagtggaagtttaaccggaccgtcgtg
tggggggcctacctacaccctttggataccctcccaccacccttcaacctgataccatcc
atcaagaatgttatccgttttctacgagatatagttgggatgtggttaaaatgtgccaga
cgcaagcgtgtcaacaggcacgttttgcatcagattcgaagccggtatattcaggggaat
ctatcggttgcttccacaaactccgattctatcaggccaagggatgtgcagttactaagg
aatgacatccaagctctcagacattttgcagagatccgccttgaaactatcgacaagtca
ctggacacttcgaatggcaaggcaagtggtctacgtaaaaagctagaagatctcggccca
ctagggtcacatgtcaccgaggtgttgagcaagtccgtggcactgacggacaacgccgac
tcactgcgggctcaaaccgatcagttagaagaagaacaggccacggagattgtagatagg
gaccacgaatcggctgacttgagagaccggatagctgagcagatttccgcgatggaacag
ctccggagcgaccatgcagccgaagtgagggagatggatcgtcatgcagagagtttgaac
ggcatcatcaggcgcctgaatgacgaggttgtcgccagggagcggcacgagtcggccctg
gctaacaacatcatccggttggaaggtgagaagaccagcctgggtttggagctggatgat
gtgaacgaggaaaagacaaagctgggggtcgaggttgcgaggctcaccggacagttacaa
cacagccgactcggtttcatgcagcgtgtagccactgtgatcgaagacagagtaaaagcc
cctggcgatcagggagagggcccaagtaactga
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