Acipenser ruthenus (sterlet): 117398272
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Entry
117398272 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: plakophilin-1-like
KO
K10387
plakophilin 1
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
arut04812
]
117398272
Cytoskeleton proteins [BR:
arut04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
117398272
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT
HEAT_EZ
Adaptin_N
Atx10homo_assoc
Arm_2
Nipped-B_C
Motif
Other DBs
NCBI-GeneID:
117398272
NCBI-ProteinID:
XP_033853129
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All DBs
Position
28:complement(18584132..18605004)
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AA seq
718 aa
AA seq
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MSSRNLTQMSTYFKTATVPESFPRVDSTSLALPSDKTMLSGGALGQQRVAEQVFSTLKRN
KTIQRTESSSTKESTTRQNGFNFKMSPTTPTGSAFFSNNVNGNQYSTYSSKKQFYNQHSL
PAVKYHNNSMVSSKRQFSSNSQRESQFSPTSPSNGFQSYKTMTTSRSEPDIPQIIKSSTL
PNYQSKRHSTYRVKNGYMTMPYSVNGNQVQTAANQYNSQQTMVDGGMAASRLTLREAVDC
LEQRDENLQYCGASFIQHASFQEDKTKQEVYSLGGIPKLVALLSSRSPQVQQAASGALRN
LVFKYQTNKMEVKRNNGIYEALKLMRQTDCPETQKQLTGLLWNLSSADELKPELVRDALP
ILTEKVVVPFAGWSEQGIKLNNRLDPEIFYNATGCLRNLSSANQSDRDAMRNCRGLIDSL
VSYVQTCVSADRPDDKSVENCVCILHNLSYQLEKEAPAQFSQISALASSPTRDLATNDSS
SMGCFSPRSSQIPQENSIALPVPEDSNPRGMGLLFNSKTMQTYLSLMGKSKKDATLEACT
GALQNITANNGIVSNVMSQAIVQKLNGLPEVSRLLKSSNPGVQKTATSLLGNLSRNPSLQ
NVMSRQILPDITQVLTSGAHNAAGSDDMMATACHTIRNLVVSNPESAKGVMGNNVLSTLR
DLSRNGYSPKSSKAAAILLYDLWGQKELQSFFKKQGVNKNIFVNDITNSAYKTLQGVM
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccagaaacttgacacagatgtcaacttattttaagacggcgacggtccccgag
agtttcccccgggtggatagcacgtccctggcgctgccttcggacaagaccatgctatca
ggaggtgccctcggacagcagcgcgtagctgagcaggtttttagtacgttaaagagaaac
aagacaattcagagaactgaaagcagctccacaaaagaaagcacaacacggcagaatgga
ttcaatttcaagatgtcccccacaacgcctactggaagtgctttcttttcaaacaatgtc
aacggaaaccaatacagcacttacagttcgaaaaaacagttttataaccagcatagcctg
ccggctgtgaaataccacaataacagcatggtctcctcaaagagacagttcagctccaac
agccagagggagagccaattctcacccaccagcccaagtaatggcttccagtcttacaag
accatgactaccagtcgaagcgagcctgatataccacagatcatcaagtcgtccacactg
cccaactaccagagcaaacgccacagcacgtacagggtcaagaatgggtatatgaccatg
ccctactctgtaaatggaaaccaagtccaaactgcggccaaccagtacaactcccagcag
acaatggtagacggtggcatggcagcttcgagactcacccttcgtgaggctgtggattgc
ctagagcaaagagatgagaacctgcagtactgtggagcctctttcatccagcacgccagc
ttccaggaggacaagacaaagcaggaggtgtactctcttggtgggattcccaaactcgtg
gccctgctcagcagcagaagcccccaggtccagcaggcagcctccggcgcgctgcgcaac
ctggtcttcaaataccagaccaacaagatggaagtgaagaggaacaacggcatctatgag
gctctgaagctgatgaggcaaaccgactgcccggagacacagaaacaactcacaggactg
ctgtggaacctgtcctcggctgatgagctcaagccagagctggtcagagacgctctcccc
atcctcactgagaaagtggtggtgcccttcgcaggctggtcagagcaaggcatcaagctc
aacaaccgcctggacccagagatcttttacaatgccacaggctgcctcagaaacctgagc
tcggcaaaccagagtgaccgtgacgccatgcgcaactgccggggtctgattgactctctg
gttagctacgtccagacctgtgtgagtgctgaccgtcccgatgataagtcagtggagaac
tgcgtttgcattctacacaacctgtcgtaccagctggagaaggaggcccctgcccagttc
agccagatcagcgccctggccagctccccgacccgggacctcgccaccaacgactcctcg
tccatgggctgcttcagcccacgtagcagccagatcccccaggagaactccattgctctc
cctgtcccagaggacagcaaccccagagggatgggcttgctgttcaactccaagaccatg
cagacgtacctgtcactgatgggaaagagcaagaaggatgctacactggaggcctgtacg
ggggcgctgcagaacatcactgccaacaacggaatagtgtccaacgtgatgagccaggcc
atcgtgcagaagctcaacgggctaccagaggtatcacggctcctcaagtccagtaaccca
ggcgtccagaagactgccacgtcgctgctggggaacctgtcccgaaaccccagcctgcag
aacgtcatgagtcgtcagattctccctgacatcacgcaggtccttaccagcggagcacac
aacgcggccggctcggacgacatgatggccacagcctgccacaccatccgcaaccttgtg
gtctccaacccggagtcagccaagggagtaatgggcaacaatgtgttgtccacgctccgc
gacctcagcagaaacggatattccccgaaatccagcaaagccgctgccatcctgctgtat
gacctctggggacagaaggagcttcagagcttctttaaaaagcaaggggtgaacaaaaat
atctttgtgaatgacatcaccaattcagcttataaaaccctgcagggggtgatgtga
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