KEGG   Acipenser ruthenus (sterlet): 117398684
Entry
117398684         CDS       T07327                                 
Name
(RefSeq) putative transcription factor p65 homolog isoform X1
  KO
K04735  transcription factor p65
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04010  MAPK signaling pathway
arut04137  Mitophagy - animal
arut04210  Apoptosis
arut04218  Cellular senescence
arut04620  Toll-like receptor signaling pathway
arut04621  NOD-like receptor signaling pathway
arut04622  RIG-I-like receptor signaling pathway
arut04623  Cytosolic DNA-sensing pathway
arut04625  C-type lectin receptor signaling pathway
arut04920  Adipocytokine signaling pathway
arut05132  Salmonella infection
arut05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:arut00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117398684
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    117398684
  09143 Cell growth and death
   04210 Apoptosis
    117398684
   04218 Cellular senescence
    117398684
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    117398684
   04621 NOD-like receptor signaling pathway
    117398684
   04622 RIG-I-like receptor signaling pathway
    117398684
   04623 Cytosolic DNA-sensing pathway
    117398684
   04625 C-type lectin receptor signaling pathway
    117398684
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    117398684
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117398684
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117398684
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:arut03000]
    117398684
Transcription factors [BR:arut03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    117398684
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer
Other DBs
NCBI-GeneID: 117398684
NCBI-ProteinID: XP_034771232
LinkDB
Position
55:1837581..1852911
AA seq 627 aa
MDVFVWDSHPVLNQGMPAGLSSSPYVEVIEQPKQRGMRFRYKCEGRSAGSIPGEKSSDTT
KTHPAIKIHHYSGPVRVRISLVTKTPPYKPHPHELVGKDCKEGYYEADLQDRRIHSFQNL
GIQCVKKKDVSEALNSRIRSQNNPFNIPEDEMRNEDYDLNAVRLCFQVYITLPNGELHRL
DPVVSQPIYDNRAPNTAELKICRVNKNSGSCKGGDEIFLLCDKVQKEDIEVRFFRDSWEG
KGHFSQADVHRQVAIVFRTPPYSSTALSEPVKVKMQLRRPSDKEVSEAMDFQYLPDDTDQ
YMVKEKRKRTQNAFNNFVLNASFPGASVMSQRPLATSRRNADLTRSQASMSQPVTPVVPA
RPPAPASTLPSMGKPMNLFSQPSFPASMDFSSQFRLNQQQEKQHNPLQHQQFSRNHFNPC
PGQHTTVAQVFATSNQQPQASLPVQNLPGLPGTEYPTVNISDLFDTQWASLQSQEPQNAG
GTQGKHDPALDFESPAISSIGGMEFDSITVDQTSINLEGIETEDFQKLLIDSQGPGELNQ
ALGEAASGGERHQQPSLPAQGHGHTMMSYPRSILSLINSGDDDEAGLGAFFTNATAGNEI
YNSMDDDDRLMSILDQNWPNLDGQPSV
NT seq 1884 nt   +upstreamnt  +downstreamnt
atggacgtcttcgtttgggattcccatcctgttctgaatcaaggaatgccggcagggctg
tccagctctccgtacgtggaggtcatcgagcagcccaaacagagaggcatgcgcttccga
tacaagtgtgagggcagatccgccgggagcatccctggagagaagagcagcgacaccacc
aaaacacaccctgccatcaagattcatcactattccgggccggttcgagtgcggatctct
ttggtgactaagacccccccttacaaaccccacccccacgagctggtgggaaaggactgc
aaagagggctactacgaagctgacctgcaggacagacgcatacacagttttcagaacctg
gggattcagtgtgtgaagaagaaggatgtatcagaggccctcaacagcaggataaggagc
caaaacaaccccttcaacatcccggaagatgagatgaggaatgaggattacgacctgaat
gctgttcggctttgtttccaggtctatatcaccctgcctaatggagaactccacagactg
gaccctgtagtctcccagcctatctatgacaaccgtgcccctaacactgcagagctgaag
atttgcagagtgaataaaaactcagggagctgcaaaggcggagacgagatcttcctgctg
tgtgataaagtccagaaagaagacatcgaagtgcggttcttccgagactcctgggagggg
aagggtcatttctcccaggctgacgtgcatcgccaggtggccatcgtcttccgcacgccc
ccctacagcagcaccgctctgagcgagccggtcaaggtgaagatgcagctccgccggccg
tccgacaaggaggtcagcgaggcgatggacttccagtacctgccggacgacacagatcag
tacatggtgaaagagaagaggaagaggactcaaaacgcctttaataatttcgtgctgaac
gccagcttccccggagcctctgtaatgtctcaaaggcctttagccacaagcagaaggaac
gcagacctgaccagatcacaagccagcatgagccaacctgtgactcccgtagttcctgcg
agaccacctgcaccagcctccaccctgccctcaatgggcaaacccatgaacctcttcagc
cagccttccttccccgcttccatggacttctcatcgcagttcaggctcaaccaacagcag
gagaagcagcacaaccccctccagcatcagcagttcagcagaaaccacttcaacccctgc
ccaggccagcacacgaccgtagcccaagtcttcgcaacttccaatcagcagccccaagcc
agcctcccagtgcaaaacctcccggggttacccggaacggagtaccctacagtcaacatc
tccgatctgttcgacacccagtgggccagtctccagagccaggagccccagaacgcaggg
ggcacccaaggcaagcacgaccccgccttggatttcgagtccccagccatctccagcatc
ggcgggatggagttcgacagcatcaccgttgaccagacttccatcaacctggaaggcatc
gagaccgaggacttccagaagctgcttatagactcccaggggcccggggagctgaaccaa
gccctaggggaggctgccagtggtggggaacgacaccaacagccctccctccctgcgcag
ggccacggtcacaccatgatgagctaccccaggagcatcctgagcttgataaacagcggc
gatgacgacgaggcgggcctgggggccttcttcacgaacgcgaccgccggcaatgagatt
tacaactccatggacgacgatgaccgcttgatgtccattctggaccagaactggcccaat
ctggacggacagccgtctgtttaa

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