KEGG   Acipenser ruthenus (sterlet): 117402127
Entry
117402127         CDS       T07327                                 
Name
(RefSeq) CD209 antigen-like protein C
  KO
K06563  C-type lectin domain family 4 member L/M
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03260  Virion - Human immunodeficiency virus
arut03264  Virion - Flavivirus and Alphavirus
arut03265  Virion - Ebolavirus, Lyssavirus and Morbillivirus
arut03273  Virion - Lassa virus and SFTS virus
arut04145  Phagosome
arut04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03260 Virion - Human immunodeficiency virus
    117402127
   03264 Virion - Flavivirus and Alphavirus
    117402127
   03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
    117402127
   03273 Virion - Lassa virus and SFTS virus
    117402127
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117402127
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    117402127
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:arut04131]
    117402127
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:arut04054]
    117402127
   04515 Cell adhesion molecules [BR:arut04515]
    117402127
   04090 CD molecules [BR:arut04090]
    117402127
   04091 Lectins [BR:arut04091]
    117402127
Membrane trafficking [BR:arut04131]
 Endocytosis
  Phagocytosis
   C-lectin receptors
    117402127
Pattern recognition receptors [BR:arut04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   117402127
Cell adhesion molecules [BR:arut04515]
 Lectins
  Selectins and C-type lectins
   117402127
CD molecules [BR:arut04090]
 Proteins
  117402127
Lectins [BR:arut04091]
 C-Type lectins
  Asialoglycoprotein and DC receptors
   117402127
SSDB
Motif
Pfam: Lectin_C Fez1 UPF0242 Golgin_A5 DUF7018 Filament Chordopox_A33R DUF848 CENP-F_leu_zip Fib_alpha DUF1664 FapA NET2A_C
Other DBs
NCBI-GeneID: 117402127
NCBI-ProteinID: XP_033858888
LinkDB
Position
34:3070229..3084135
AA seq 322 aa
MADSNDFEHFDLHQQTAQRKYQDMKRNCGSDMEEEKPKPMKTKDRNVCGSKSIVVLYILL
VATSMVWMILLSKAFAKHSEISAEIENLSNSRTILKGNDSAIFAELQELRNTLISLKASD
TKRPSDLQAIQKDVSSLKTAETKRSSDLQALQQEVSSLKTEVTEEIQNLRVEQTLLKEKD
SKITTNVTNLEKYVSKVCIIKTCPCEWTLFSGKCYYFSNENRDWKKAREFCQSQDSDLTV
INSDEELNYLKGKVRVVHLVGMSDLETEGVWKWLDGSLVDGRMWNPGEPNNQGKEDCGEM
SNGKLNDIPCNLKQRWICEKTL
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcagacagtaacgactttgaacattttgacttgcatcaacaaactgcacaaagaaaa
tatcaggacatgaaaagaaactgcggatcagacatggaagaagagaagcctaaacctatg
aagactaaagatcgtaatgtctgtggaagcaaatccattgttgttctctacattctgttg
gtggctacctcgatggtgtggatgatcctgctctccaaggcatttgcaaaacattcggaa
atctctgctgaaatcgagaacctgagtaactcgaggacaattttgaaaggaaatgattct
gcaatatttgccgaactacaggagctgcggaatacactgatcagcctgaaagcaagcgat
actaaacggccttcagatctccaggcaatacaaaaggatgtttctagcctcaaaacagca
gagactaagcggtcttcagatctccaggcattacagcaggaagtgtctagcctcaaaaca
gaagtcactgaagaaatacaaaacctgagagtggagcaaaccctcctgaaggaaaaagat
tctaagattacgacaaatgttacaaacttggaaaaatatgtttctaaagtgtgcatcatc
aagacctgcccttgtgaatggaccttgtttagtgggaaatgttactacttttccaatgag
aacagagactggaagaaagcaagagaattctgtcaatcccaagactcggaccttacagtg
atcaacagtgatgaagagctgaactatttaaagggcaaagttcgagtggttcacttggtt
ggaatgagcgatttggagacagaaggggtctggaagtggttggatgggagtttagtggat
gggagaatgtggaatcctggggaaccaaacaatcaaggaaaagaagactgtggtgagatg
agcaacggcaagctgaatgacatcccttgcaacctaaaacaacgatggatctgtgaaaaa
acactttaa

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