Acipenser ruthenus (sterlet): 117402127
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Entry
117402127 CDS
T07327
Name
(RefSeq) CD209 antigen-like protein C
KO
K06563
C-type lectin domain family 4 member L/M
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03260
Virion - Human immunodeficiency virus
arut03264
Virion - Flavivirus and Alphavirus
arut03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
arut03273
Virion - Lassa virus and SFTS virus
arut04145
Phagosome
arut04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03260 Virion - Human immunodeficiency virus
117402127
03264 Virion - Flavivirus and Alphavirus
117402127
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
117402127
03273 Virion - Lassa virus and SFTS virus
117402127
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117402127
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117402127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117402127
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
arut04054
]
117402127
04515 Cell adhesion molecules [BR:
arut04515
]
117402127
04090 CD molecules [BR:
arut04090
]
117402127
04091 Lectins [BR:
arut04091
]
117402127
Membrane trafficking [BR:
arut04131
]
Endocytosis
Phagocytosis
C-lectin receptors
117402127
Pattern recognition receptors [BR:
arut04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
117402127
Cell adhesion molecules [BR:
arut04515
]
Lectins
Selectins and C-type lectins
117402127
CD molecules [BR:
arut04090
]
Proteins
117402127
Lectins [BR:
arut04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
117402127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Fez1
UPF0242
Golgin_A5
DUF7018
Filament
Chordopox_A33R
DUF848
CENP-F_leu_zip
Fib_alpha
DUF1664
FapA
NET2A_C
Motif
Other DBs
NCBI-GeneID:
117402127
NCBI-ProteinID:
XP_033858888
LinkDB
All DBs
Position
34:3070229..3084135
Genome browser
AA seq
322 aa
AA seq
DB search
MADSNDFEHFDLHQQTAQRKYQDMKRNCGSDMEEEKPKPMKTKDRNVCGSKSIVVLYILL
VATSMVWMILLSKAFAKHSEISAEIENLSNSRTILKGNDSAIFAELQELRNTLISLKASD
TKRPSDLQAIQKDVSSLKTAETKRSSDLQALQQEVSSLKTEVTEEIQNLRVEQTLLKEKD
SKITTNVTNLEKYVSKVCIIKTCPCEWTLFSGKCYYFSNENRDWKKAREFCQSQDSDLTV
INSDEELNYLKGKVRVVHLVGMSDLETEGVWKWLDGSLVDGRMWNPGEPNNQGKEDCGEM
SNGKLNDIPCNLKQRWICEKTL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagtaacgactttgaacattttgacttgcatcaacaaactgcacaaagaaaa
tatcaggacatgaaaagaaactgcggatcagacatggaagaagagaagcctaaacctatg
aagactaaagatcgtaatgtctgtggaagcaaatccattgttgttctctacattctgttg
gtggctacctcgatggtgtggatgatcctgctctccaaggcatttgcaaaacattcggaa
atctctgctgaaatcgagaacctgagtaactcgaggacaattttgaaaggaaatgattct
gcaatatttgccgaactacaggagctgcggaatacactgatcagcctgaaagcaagcgat
actaaacggccttcagatctccaggcaatacaaaaggatgtttctagcctcaaaacagca
gagactaagcggtcttcagatctccaggcattacagcaggaagtgtctagcctcaaaaca
gaagtcactgaagaaatacaaaacctgagagtggagcaaaccctcctgaaggaaaaagat
tctaagattacgacaaatgttacaaacttggaaaaatatgtttctaaagtgtgcatcatc
aagacctgcccttgtgaatggaccttgtttagtgggaaatgttactacttttccaatgag
aacagagactggaagaaagcaagagaattctgtcaatcccaagactcggaccttacagtg
atcaacagtgatgaagagctgaactatttaaagggcaaagttcgagtggttcacttggtt
ggaatgagcgatttggagacagaaggggtctggaagtggttggatgggagtttagtggat
gggagaatgtggaatcctggggaaccaaacaatcaaggaaaagaagactgtggtgagatg
agcaacggcaagctgaatgacatcccttgcaacctaaaacaacgatggatctgtgaaaaa
acactttaa
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