Acipenser ruthenus (sterlet): 117406497
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Entry
117406497 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3-like
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117406497
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117406497
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117406497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
WHD_TTC3
TTC3_DZIP3_dom
TTC3_9th
zf-RING_2
TPR_BSK1_C
zf-rbx1
TPR_1
TPR_2
TPR_16
zf-C3HC4
zf-C3HC4_2
TPR_11
zf-RING_UBOX
zf-RING_5
TPR_CcmH_CycH
TPR_12
zf-C3HC4_3
TPR_17
zf-ANAPC11
zf-RING_11
PAM2
Dam
zf_RING_Vps8_fungal
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
117406497
NCBI-ProteinID:
XP_033866465
LinkDB
All DBs
Position
8:complement(3865336..3903843)
Genome browser
AA seq
1970 aa
AA seq
DB search
MCDSDSETDDLPHIMGIRRPWDKHEHLSCPKKKNSICEYWSLISPTVKKETCQVMNICIF
WPILFKPCVNSYKTQWAIETGFINANLKTELNLKSLYKIEVLETILQALAKGVVSEVLVK
RLKRIGDHFLQNFDCVDEAIDWMERAGEPGISGILSRLGSKRTQRETLRFMCCEYVHYME
LTVNGVNLVIEFESPAYEWVVKKSEEMKKKGNDQYQKRKYDSAIKWYTKAIKYHPENHIL
YGNRAICFIRCDKKQKALGDGKRATILKPNWPKGHYRFCEALFLLDEHQRALEANAKAQD
LCRDNPDGIWDLCQQNERFRTEIEKLQAAEKTKKKGLKGDSSKKLEAAARVETEALHDTK
ETDNKPENSNNISETKENEDTDETGDIAGKTEDSIAEGCSKFVKETIRDMPGIQSQNMGQ
KTPEKKKAKNRTQKPVEKTSAGSGHGDVNSLILDSDKALEERNFRKAEQAFVKALDLLDL
TSLKKLNLYTMDYASALWEVGQPEDLAAAKNHFNKVKNNFPKDGLLQSLANYGLGKVYLK
ENRFSEALDQFKKSLALANLQTTPAILTCPPAKHIMDDRIEHLKRLVEVCIELCTFPPKP
DAVCRYQQCQVNSKIQIFFTDLDFKGFIRVQCCQRCCVEYHISCWKKIKAAVFNDKNDKD
FLREACFTPDCSGKISKIIIYGSTGLLKCELETNIQKVNATPKLTVKQKCTSIKKLKSKE
DRKLRRKQRRKEAMEAITLKLSHESKTGSDCSKADSLDKAVQQTWMIYGDRILQQIIENK
ELLKEGVQDISNMKKYLEPWTAGDKEKNTFSINNAEQPVAMGDLVDLLGQRKNRVLTRVF
IEALSKCEDISPKLQDWTQRLNNAGLKAAEAFITRYSDNLEEHDLSPLLDFYPFMEFLTE
KFGTKPVFLNSGTCALVDYIKQAPQQEMRLFIWSLENNVEMFPSLKHILNEYFEVMDASC
TVLKKQDNEDISNKGIQGKNRNRKKKLKESKSVYILSGTVGGTHREEDEDDIFTEEDTLR
FLCSQDRFMVPEHLRDQVTEFEVQYNQAPRSSHYRRILDNNPDPSRESLYDYFSQILEEH
GPMEIDNQLLVGEFENFPGETKEMVANAGGLKSFLLESLRFVMINDLIGLMKHAVSLKEQ
AVDAPWAASDYINSGNKLSDSVPGNDWEHYNQQKAQLNPSAQEFKPFSINHNDFLSYTPN
NMLLTQTPLPSDYGFSSTDSFSALKMALPETDPFGVIHFSPLETAFASVTHSELSDALEC
TMSHNSNIVIDNSGKSSIGTSNRVYDPERTDSLKTSAQYTPFYFGTAKDTTSEPFMGSCI
YDKVGPESENSKKKKKKKDSKPVFMKAIGVQVYHETTEQEVNTDPFNPFETQQGDIIRNE
KELRVLREQLKEVEEKYEQRDDKEINALEREVKEINQKIEITKTELNLIRQKLESDMKKA
QQEKREHQESFKTLKNKIKSLNETSETSLRNIEEKKQEYEKHFNKFLELSNQSAAEKMKL
EELLAQKEESIKKAVERARAAEVTLLENQRSGSLYLLYKVASKGEVTVKNLKQLAAGTSS
PTLFLPAIDAWQALLSDMQKKIRTAESQYEERIDMVKKGSKLSSLAPVCVPKPPPIPSLP
MPFYPFPAPHVLASTVPFQPHFPVPPPTFFTSQQGSAPAMQPVNYTPGRPQTQDQLDSSQ
LHSGSNSTPRPGDRVVMSNRPFINDPAVLHVSSLVRHQNTGNMQQGEQKRASRASPSPRA
SPSPVPSEVMEGKPRQERTPVNQTSAVPDVKSSRPAPQQQQNSFEKIIDRLIAMFPHYTR
STLTVFIKDIRTGNGGSLNTLSYEEIINRVAQRILDHQDNTREQIQHDNVSRTTPTKPPS
KSTSPAPKRGSNTPPPAHAWRLVASQSKSQWQKNKALYAEDPCIICHEEMSPEDLCVLEC
RHSFHGECIKAWLKEQSTCPTCRVHALLPEDFPVLPGRRRLVNASASSSS
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgattccgactctgagacagatgatcttccacacatcatgggcataaggaggccc
tgggacaaacacgaacatcttagctgtcctaaaaaaaaaaatagtatttgtgaatattgg
agcctcatctcgccaactgtgaaaaaagagacgtgccaagtaatgaatatctgcatcttt
tggcctatattgtttaaaccatgtgtgaattcctataaaactcaatgggcaatagaaacc
gggttcataaatgccaatttgaagactgaattgaacctgaagagtctgtacaaaattgaa
gtactggaaacaatccttcaggccttggcaaaaggcgttgtgtctgaagtattagtcaaa
cgcttaaaaagaataggggatcatttcctccaaaactttgattgtgttgacgaagccatt
gattggatggagagagcaggggaacccggaatctctggaattctctcaagacttggatca
aagcgtacgcagagggagaccctgagatttatgtgttgtgaatatgtccattatatggag
ctgacggtcaacggtgtgaatttggttatagagtttgaaagtccagcttatgagtgggtt
gtaaagaaaagcgaagaaatgaaaaagaaaggaaatgaccaatatcagaaaaggaaatat
gactctgcaataaagtggtacacaaaagctattaaataccacccagagaatcatatcctt
tatggcaacagagctatttgtttcattcgctgtgacaaaaaacaaaaagccctcggtgat
ggaaaaagagccactatattaaaacctaactggcccaaggggcattatcgtttctgtgaa
gcattattcttattggatgagcaccagcgagctttggaagccaatgcaaaggcacaggat
ctgtgcagagataaccctgatgggatctgggatctatgtcaacagaatgagagattcaga
acagaaattgaaaaactccaagctgctgaaaaaactaaaaagaaggggctaaaaggagat
tccagtaaaaaactggaagcagctgccagagttgaaacagaagcactgcacgatacaaag
gaaactgacaacaaaccggagaacagcaacaacatttctgagaccaaagaaaatgaagat
acagacgaaactggggacattgcaggtaaaacagaagacagcattgcagagggctgctcc
aagtttgtcaaggagacaataagggacatgcctggaatacaaagtcaaaacatgggacag
aagacaccagaaaaaaagaaggcaaaaaacagaacccagaaacctgtggaaaagacttca
gcaggctcgggtcacggagatgtgaattctctcattcttgactcggacaaagccctggaa
gagcgtaactttcgcaaagctgaacaagcttttgtaaaagcacttgatttactagatttg
acctcgctaaagaaactcaatctctatactatggattatgccagtgccttgtgggaagtt
ggacaacccgaggatttggcagcagctaaaaatcattttaacaaagtaaaaaacaatttt
cctaaagacggtctccttcagagtctggctaactatggattagggaaggtgtacttgaaa
gaaaacaggttttcagaagctctggatcagttcaaaaaatctcttgccctggcaaatttg
caaactacacctgccatattgacttgccccccagcaaagcatattatggatgatcggatt
gaacatttaaagcgcctcgtggaggtgtgcattgaactgtgcacgttccctccaaaaccg
gacgcagtttgccgctatcagcaatgccaagtgaattccaaaatccagatcttcttcacg
gatctcgattttaaggggtttattcgagtgcagtgttgccagaggtgttgtgtagagtat
cacatcagctgctggaaaaagataaaagcagcagtattcaacgataaaaatgataaggat
tttctgcgggaagcatgttttactcctgactgtagtggtaaaatttcaaaaattataatc
tatggttcaacaggattactcaaatgtgagttagaaactaatattcagaaagtcaatgca
acaccaaagctgactgtcaaacagaaatgtacaagcattaagaaactgaaatctaaagaa
gatcgcaaattaagacgaaagcaacgaagaaaagaggcgatggaagccattacattgaaa
ctaagccatgaatcaaagacaggaagtgactgttctaaggcagattctcttgataaagct
gttcagcagacctggatgatctacggggatcgcatcctgcagcagattattgagaacaaa
gaacttttgaaagagggggtacaggacatctctaacatgaagaagtatctggagccttgg
actgcaggggacaaggagaaaaacacattctccataaataatgctgagcagcctgtagct
atgggagaccttgtggatttactggggcagagaaagaacagggtattaacaagagtgttc
attgaagcactaagcaaatgtgaagacatcagcccgaagctgcaagactggactcaaagg
cttaataatgcaggtttgaaagcagcagaggcattcattacccggtactcggacaatcta
gaagagcatgacctcagtccacttttggatttctatccctttatggaatttttgacagaa
aaatttggaactaagccggtgtttttgaactctggcacctgtgctcttgtggattatata
aagcaggcccctcaacaggaaatgcgtctctttatttggtcccttgaaaacaacgtggaa
atgttcccctccctcaaacacattctcaatgaatattttgaagtaatggatgcctcctgt
actgtgttaaaaaagcaagataacgaagatatatctaataaaggtattcagggtaaaaac
aggaatcgaaaaaagaagctgaaagaatcaaagtctgtttatattctgtctggaacggtt
ggtgggacgcacagagaggaagatgaggatgatattttcactgaagaagacactctgagg
tttctctgctctcaagatcgttttatggttcctgagcatcttcgtgatcaggtaacagaa
tttgaagttcaatataaccaagctcctcgcagcagccattacagaagaattctggacaat
aacccagatccatcacgagagagtttgtatgactatttttctcaaattctggaagagcac
ggcccaatggaaattgataaccagttgctggtgggagaatttgaaaacttccctggagaa
acaaaggaaatggtagcgaatgctggaggactgaaatcttttctgctggaatcgttgaga
ttcgtcatgataaacgatctgattggactgatgaaacatgctgtttctcttaaagagcaa
gcggtggacgcaccctgggcagcaagtgactatattaacagcgggaataaactctcagac
agtgtgcctggcaatgactgggagcactataaccaacagaaagctcaactaaatccttct
gctcaggaatttaaacccttctctataaaccacaatgacttcttatcttataccccaaat
aacatgttgctgacacagactccgctaccctcggattatggattttcatcaactgattct
ttttctgctttgaaaatggctttgcctgaaactgacccatttggagtaatacacttctct
ccattagaaactgcattcgcttcagtaacacattcagaattatctgatgctctggagtgt
acaatgtctcataattctaatatagttattgataattctggtaaaagtagtattggtact
tccaatagagtgtatgatcctgaaaggacagacagcttgaaaactagtgctcaatataca
ccattttactttggaactgctaaggatacaacttcagagccatttatgggatcatgcata
tatgacaaagttggtcctgaatctgagaattctaagaagaagaagaaaaaaaaagattct
aaacctgtttttatgaaggctataggtgtacaggtttatcatgaaactacagaacaggaa
gtcaataccgatccttttaacccttttgaaactcagcaaggggacattattcgaaatgaa
aaggagctcagagtcctgcgagagcaactgaaagaagtcgaagagaaatacgaacagcgc
gacgacaaagagattaatgcacttgagagagaagtgaaggaaataaatcagaaaatagag
ataacaaaaacagaactgaacttgattcggcagaaactagaaagtgatatgaagaaggcc
caacaggaaaagcgagaacaccaggaatcatttaaaacgctcaagaataaaatcaaatct
ctaaatgaaaccagtgagacatccttgagaaacattgaagaaaagaagcaggaatatgag
aagcactttaataagttccttgaattaagcaaccaatcagcagctgagaagatgaagctg
gaggaactgcttgcgcagaaagaagaatcaatcaaaaaggctgttgaaagagcaagggca
gcagaggtcactttgcttgagaatcaacgcagtggcagcctgtatttactgtacaaagtt
gcttcgaaaggagaagtaactgtaaagaacctgaaacaactggcagctggaacctcctct
ccaactttgttcctacctgccattgatgcctggcaagcattgctttcagacatgcagaag
aaaataagaactgcagaatcgcaatatgaggaaagaattgatatggtgaaaaagggttca
aaactaagcagtcttgcaccagtgtgtgttccaaaaccacctcccatcccttctctacct
atgccgttttatcctttccctgcaccacatgttctggcgtcaactgtgcctttccagccc
cacttcccagtgccaccccccactttctttacctctcagcaaggctctgcaccagccatg
cagcctgtcaattacaccccaggcagaccgcaaacccaagaccagctggactcctcacag
ttacactcaggctcaaacagcacgcctcgtcctggagaccgtgtagtaatgtccaacagg
ccctttattaatgacccagcagttctgcatgtgtcctccctggttcggcatcagaacact
gggaacatgcagcagggagagcagaaacgtgcatccagagccagccccagccccagagcc
agccccagtcctgtcccatccgaggtgatggaagggaagcctcggcaagagcgtacccca
gtaaaccagacgtctgcagtgcctgatgttaagagttcaagacccgctccacaacagcag
cagaacagttttgagaagattattgatcgactgattgccatgtttccgcattataccagg
tctaccctgacagttttcattaaggacattcgtactggaaatggaggaagtcttaatacg
ttgtcctacgaagaaatcatcaacagggtggctcaacgcatcttggaccatcaagacaac
actcgagaacagatccaacatgacaatgtgtctcgcactacaccaacaaagcctccttcc
aaatctacttctccagctccaaagaggggctcgaacacaccgccccctgcacatgcgtgg
agacttgtagcatcgcagagcaaatcgcagtggcagaaaaacaaagcattgtatgctgag
gatccctgtattatttgtcatgaagaaatgtctccggaagacctttgcgttctcgagtgc
agacacagctttcatggagagtgtatcaaggcctggctgaaggagcagagcacctgtcct
acatgccgagttcatgccctcctcccagaagacttccccgtcctccctgggagacgccga
ctggtcaacgcctctgcgtcctcctcctcgtga
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integrated database retrieval system
