Acipenser ruthenus (sterlet): 117407053
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Entry
117407053 CDS
T07327
Name
(RefSeq) vascular endothelial growth factor receptor 1-like isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04010
MAPK signaling pathway
arut04020
Calcium signaling pathway
arut04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117407053
04020 Calcium signaling pathway
117407053
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117407053
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
arut01001
]
117407053
Enzymes [BR:
arut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117407053
Protein kinases [BR:
arut01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
117407053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
Ig_2
VEGFR-1-like_Ig-like
ig
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
V-set
VEGFR-2_TMD
Ig_4
C1-set
C2-set_2
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
117407053
NCBI-ProteinID:
XP_034778435
LinkDB
All DBs
Position
8:complement(2109688..2226043)
Genome browser
AA seq
1336 aa
AA seq
DB search
MICYILIMCCGLAGNVLSKGSRSSSRLNSPVLSVTSKQLVIQASQTLQLQCKGKAQLAWT
TPDRVHPDQGRLSIKEYRCGSQDKLYCSSLTLSGASARDTGAYACKYSTKMRKRQAAVYV
YIRDALKPFLELHSNIPEVVYLTEGSKLIIPCRVTAPDIPVTLKKFPEERLIPDGKNLIW
NSKHGFIIPDPTYQFIGLLSCEATSNGVLYSTKYLTHRQANTIFDVYLNATNPLKMLRGE
TLAINCTVTAEWNARVQITWDYPGKGNSSALITNRIDQSSSNIFHSVLVIKQLKDTDRGV
YSCNVQSGPSTRDTNTTLVIYDKPFISVKYRHRPTVEVAAGQDSFRLSMKVKAFPSPEVV
WLKDGMIAAEKCARYKIDGYTLIIRDVSEEDAGSYTLKLGIQQHNLYRNLTVSLVVNVKP
QIGEKAVSYQDPGTYPVGSKQALICTSHGFPPPRIQWLWHPCARNNTKGLCKLPPSTKRT
LLPVPPNYNHTGNRILSITERTEVFEGKNKTVGVLVLAEAQVSGVYRCLATNKVGKDRRN
IHFIVTEVPNGFSIELERVPTEGEDLRLACKANRFLYTDLAWTMESGADSGASLALPNNR
EEVQGEYSDTVLLKMRNVSQEHSATYVCTARHGRTGKEVRLEKRIDIIAQEAPLLLRNLS
AQQVNVSSSITLTCPAEGVPNPHITWYKDSLKLQQGSGIILAPGGNLTIERVKEEDEGVY
KCEATNQKGSVESSAYIAVQAANQSGVLALAGRADSAEKSNMELIALSCSCVVATLFWLF
LTLFIRKLKRPSSAEVKLDYLSIIMDPGEVPLDEQCERLPYDASKWEFPRDRLKLGKSLG
RGAFGKVVQAAAFGIKKSSTCRTVAVKMLKEGATASEYKALMTELKILSHIGHHLNVVNL
LGACTKYGGPLMVIVEYCKYGNLSNYLKSKRDVFVQHKDWALQTEPMKEDAPAAGAQKQR
LASMTSSESLASSGFEEDKTLSDIGEEEEDADSFYNKAIAMEDLISYSFQVARGMEFLAS
RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMALESVFDKL
YTTQSDVWSYGVLLWEIFSLGASPYPGVQIDEDFCRRLKEGTRMRAPEYATPEIYKTMLS
CWESDPKERPTFSELVERLGDLLQANVQQDGKDYIPLNTLLTSSSPAACSSSSSSHCSVE
EEAQDSDSTFSYECSGGFGYMNTRRAQEFNTFEEFSLRDRALPHQDYQTDSGMVLASEEF
KCLMWSRGKPRHSSSHSFGLKAASKRKEPVQSNTYISSCALREQDCGAASCSSSMQEPCC
SPPPDYNAAVSFFPPL
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgatttgttatatattgattatgtgctgtggacttgctggaaacgtactgtctaagggc
tctcgctcgagctccagactgaactccccagtgctgagcgtgaccagcaagcagcttgtc
atccaggccagccagactctgcagctgcagtgcaaggggaaggcacagcttgcctggacg
acgcctgatagagttcatccagatcaaggcagactgagcatcaaggagtacaggtgtgga
tcccaggacaagctgtactgcagcagcctcaccctgagcggggcctcagcgcgggacacg
ggagcctatgcctgcaaatactccaccaagatgagaaagagacaggcagctgtgtatgtt
tacatcagagatgcgctgaagcccttcttggagctgcacagtaacatcccggaggttgtc
tacctgacagaaggaagcaagcttatcatcccttgcagagtgactgcgcctgacatcccc
gtcacgctaaagaagttcccagaagaaagattgatccccgatggcaaaaaccttatctgg
aacagcaaacacggattcatcatccctgatcccacgtaccagtttataggacttctgtca
tgcgaggccacctccaacggggttctctacagcaccaaatatttaacacacagacaagca
aatacaatctttgacgtgtacctcaacgccactaacccactcaagatgctgaggggagag
acgctagcaattaactgcactgttactgcggagtggaatgccagggtccagatcacctgg
gactatccaggcaagggaaacagttctgctctcatcaccaatagaattgatcagagcagc
tccaacatcttccacagtgtcctggtcatcaagcagctgaaggacactgacaggggcgtg
tactcctgcaatgtgcagagcggcccttccaccagagacacaaacaccaccctcgttatt
tatgacaaacccttcatcagtgtgaaatacagacacaggcctacagtggaggtggctgct
ggtcaggactccttcaggctctccatgaaagtgaaagcattcccctccccggaggttgtg
tggcttaaagatggaatgattgctgctgagaagtgcgctcgctacaagattgacggatac
accttaatcatcagagacgtgtctgaagaagacgctgggagttacaccctaaagctgggg
atccagcagcacaatctgtacaggaacctgactgtctccctggttgttaatgtgaagccc
cagattggtgaaaaggccgtgtcctatcaagaccctggcacctaccctgtgggcagcaag
caagcactgatctgcacttcccatggctttccaccgcccagaatccagtggctgtggcac
ccgtgcgctcggaataacacgaagggactctgcaaactgccaccttccaccaagagaacc
cttctgccagtgcctccgaactacaaccacaccggcaacaggattctgagcatcactgag
aggacagaggtgtttgaagggaagaacaagacggtgggggtcctggtgctggctgaggca
caggtttctggggtctatcgctgcttggctaccaacaaggtggggaaggacagaagaaac
atccactttatcgtcacagaggtgcccaatgggttcagcattgaactggagagggtcccc
actgaaggggaagacctgagactagcctgcaaagccaacaggttcttatacaccgacctt
gcctggaccatggagagtggggctgacagcggagctagcctggcccttcctaacaacaga
gaggaggtgcagggggagtactcagacaccgtgctcttgaagatgaggaacgtctcccaa
gagcactctgccacctacgtctgcacagcgagacacgggcgcactgggaaagaggtgcgc
ctggagaagaggattgacatcatagcccaggaagcccctctcctgctacggaacctgagt
gcccagcaggtgaatgtgagcagctccatcactctgacctgcccggctgagggggtccca
aacccacacatcacctggtataaagacagcctgaaactacagcagggatcaggcatcatc
ctggcaccgggtggcaacctgaccatcgagcgggtcaaagaggaggacgagggcgtgtac
aagtgcgaggcgaccaatcagaaagggtctgtggagagctccgcctacatcgccgtccaa
gctgctaaccaaagtggagttcttgctctggctgggagagcagactctgcagagaagtcc
aatatggagctgatagcgctgagctgctcctgtgtggtcgccacactcttctggctgttc
ctgactctcttcatccgcaagctgaaacggcccagttctgcggaggtgaagctggactac
ctgtcgatcatcatggatccaggtgaggtgcccctggacgagcagtgtgagaggctgccc
tacgacgccagcaagtgggagttcccacgagacagactcaagctaggaaagtccctgggc
cgcggtgcttttgggaaggtggtgcaggcagcagcgttcggcatcaagaaatcatctacc
tgcaggactgtggctgtcaaaatgctcaaagagggcgctacagccagcgagtacaaagcc
ttgatgacagagctgaagatcctgagccacattggacaccacctcaatgtggtgaatctg
ctgggagcctgcaccaagtatggaggccctctgatggtgatcgtggagtactgcaagtac
ggaaacctctccaactacctcaagagcaagagagacgtgtttgtgcagcacaaggactgg
gccctgcagaccgagccgatgaaggaagatgcaccggcagcaggagctcagaagcagcgc
ctggccagcatgacgagcagcgagagcttggccagctcgggctttgaggaagacaaaacc
ctgagcgacatcggagaggaagaggaggatgctgattccttctacaataaagcgattgcg
atggaggatctgatttcctacagcttccaagtagcgcggggcatggagttcctggcatcc
cgaaagtgcatccacagagacttggcagcaaggaacatccttttatctgagaacaatgtg
gtcaagatctgcgactttggcctggctagagacatttataaggatcctgattatgtcaga
aaaggagatgccaggcttcctctgaagtggatggccctggaatccgtttttgacaagctc
tacacgactcagagtgatgtgtggtcctatggagtgctgctgtgggagatcttctcttta
ggagcttctccgtatcctggcgtccagatcgatgaagatttctgccgcagactcaaagaa
gggacaagaatgcgagctccggagtatgcaacaccagaaatttataagaccatgctgtcg
tgctgggagagtgacccgaaggaacggccgaccttttctgagcttgtggagcggctgggg
gatctgcttcaagccaatgtgcagcaggatggaaaagactacattcccctaaataccctc
ctgacatcgagcagccccgctgcctgctccagctcctcatcctcacactgctctgtggag
gaagaggctcaggactcggactccacgttcagctatgagtgctcagggggctttggatac
atgaacacacggagggcacaggagtttaacacattcgaagagttctcgctgagggacaga
gcgctccctcatcaggattaccagacggacagtgggatggtcctggcctctgaagagttc
aagtgcctgatgtggagcagaggcaaaccaagacactcctcctcccattcctttggattg
aaagccgcaagcaaacgcaaggagcccgttcagtcaaacacgtacatcagcagctgtgct
ctcagggagcaggactgtggagcagcctcctgcagcagctccatgcaggaaccctgctgc
tccccaccccccgattacaacgcagcagtctccttcttcccaccactataa
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integrated database retrieval system
