KEGG   Acipenser ruthenus (sterlet): 117407510
Entry
117407510         CDS       T07327                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117407510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arut03019]
    117407510
Messenger RNA biogenesis [BR:arut03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117407510
SSDB
Motif
Pfam: APOBEC2 NAD1 SNAD4 APOBEC_N NAD2 APOBEC3 APOBEC4 APOBEC_C APOBEC1 APOBEC4_like AID dCMP_cyt_deam_1
Other DBs
NCBI-GeneID: 117407510
NCBI-ProteinID: XP_033868515
LinkDB
Position
8:complement(53833754..53841735)
AA seq 256 aa
MPLALKKKLPEYGFYREFNNTTRSFKTLLCFSLNRENKTLWDLWGYTYNDPCQSHAESIV
LKEIEHFFKECHPDTVQKYKLTLYMSFSPCYKCCESLANFLKSEERIDLHIRASKLYFSQ
NSSNQKGLQQLKHLGVSIKVMDKEEFQDCFYLFVNELKQFEGWPDLDKMSVQYSAALEAI
LNQCKTNTDSGNVSADSAALESSPLHADPTGHFDNLTPDNNNRDRPSESETPQKCSIKDG
CVGSSKGVKRKLSFED
NT seq 771 nt   +upstreamnt  +downstreamnt
atgcctttagcattgaagaaaaagctaccagagtatggattttatagagaatttaataac
actaccagaagttttaaaacattgctttgtttcagtctgaatcgggaaaacaagacactt
tgggatctttggggatatacgtacaatgatccatgccaaagccacgcagaaagcattgtg
ttgaaagaaatagagcatttctttaaagaatgccacccagacacagttcaaaagtacaaa
ctgacattgtatatgtctttcagcccttgctataagtgctgtgaaagcttggctaacttt
ctgaaatcagaagaaagaattgatctacacataagagcctcaaaactatacttctctcag
aactctagcaatcagaaaggtctgcagcagctcaagcacctaggggtctctataaaggtg
atggacaaggaggagtttcaggactgtttctatttgtttgtcaatgagctgaagcagttt
gaagggtggcctgatctggacaaaatgagtgtacagtattctgctgctctggaagccatt
ttgaatcagtgcaagacaaatacagactcgggaaacgtctctgcagacagtgctgcactg
gagagcagtccacttcacgcagatcccaccggtcactttgacaacctgacccctgacaac
aacaacagagacaggccatctgagagtgaaactccacagaaatgcagcattaaagatgga
tgtgttggcagttctaaaggagttaaaaggaagctttcttttgaggattaa

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