Acipenser ruthenus (sterlet): 117408818
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Entry
117408818 CDS
T07327
Name
(RefSeq) short transient receptor potential channel 3 isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117408818
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117408818
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Ortholog
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
117408818
NCBI-ProteinID:
XP_033870037
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All DBs
Position
2:complement(105964652..105993896)
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AA seq
912 aa
AA seq
DB search
MSAKGRKYQKRVSFSEQDNEQDWKERNGGLDSQYLRSVKTVSDSSNYYHCTMQEGDNITQ
RRLTMMREKGRRPAVRGPAFMFNNRGTSLTAEEERFLDAAEYGNIPVVRKMLEESRTLNV
NCVDYMGQTSLQLAVGNEHLEVTELLLKKDNLARIGDALLLAISKGYIRIVEAILNHPAF
VTSKRLTLSPCELQDDDLYSYDEDGTRFSPDITPIILAAHCQKYEVVHMLLMKGARIEKP
HDYFCKCNECMEKQRIDAFSHSRSRINAYKGLASPAYLSLSSEDPVLTALELSNELAKLA
NIEKEFKDNKKKETVQLNCFSLNDYRKLSMQCKDFVVGVLDLCRDTEEVEAILNGDVDAE
QDEGPHHRASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQATAIKCLVVLV
VALGLPFLAVGYWFAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFNASDRFEGITTLP
NVTVTDYPAQIFRVKTTRFSWTEILIMVWVVGMMWSECKELWMEGPKEYILQLWNVLDFG
MLSIFIAAFTARFLAFLQATKAQQFVDEHHFSDLSTVTLPPDIEYFTYARDKWLPSDPQL
ISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMF
ILYSYYLGAKVNPAFTTVEESFKTLFWSIFGLSEVSSVVLKYDHKFIENIGYVLYGIYNV
TMVVVLLNMLIAMINSSYQEIENDADVEWKFARSKLWLSYFDDGKTLPPPYSIVPSPKSF
FYCIMRVVNLFRCRRRRMKKDVELGMDISKSRLNLFTQSNLKISETHTFNSILNQPTRYQ
KIMKCLIKRFVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATEELSVLIQKL
SDKLNISMTRCE
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgaaaggcaggaagtaccagaagagagtgtctttctctgagcaggacaatgag
caggactggaaagagaggaacgggggtctggattcacagtatttgagatcagtgaaaacc
gttagcgattcatccaactactatcattgcacaatgcaagagggtgataatatcacacaa
cggagactcaccatgatgagagagaagggaagacggccagctgtccgaggcccggcgttc
atgtttaacaacaggggcaccagcctgacggcagaagaggagaggtttttggacgccgca
gagtatggaaacattcctgtggtgcgcaagatgcttgaggaatccaggactttaaatgtc
aactgcgtcgactacatgggccaaaccagcctgcagctcgcagtgggaaatgaacatttg
gaagtgacggagctgctcttgaaaaaggacaacctggcccgcatcggtgacgctctgctg
cttgctatcagcaagggttacatacggattgtggaagccatattgaaccacccggcattt
gtgacgagtaaacggttgactctcagcccttgtgagctgcaggatgatgatttgtattcg
tacgacgaagacggcacaaggttctctcctgacatcacccccatcatcctagccgcccac
tgccagaagtacgaggtcgttcacatgctgctcatgaaaggcgctcgcatcgagaaaccc
catgattatttctgcaagtgcaatgaatgcatggaaaagcagaggattgacgctttcagc
cattcccgctcacgaataaatgcctacaaaggattagcaagtcctgcttatctgtctctg
tctagcgaagacccagtcctcactgctttagaacttagcaatgagctggccaagttagcc
aacattgaaaaagaatttaaggacaacaaaaaaaaagagacggtgcagctcaattgcttc
tccctgaatgactatcgcaagctctcgatgcaatgtaaggactttgtagtgggtgttctt
gatttgtgccgagatactgaagaggtcgaagccatactgaacggagatgtggacgctgaa
caggacgaagggccgcaccacagggcttcccttagtcgagtcaaactggccatcaagtac
gaagtcaagaagtttgttgctcacccaaactgtcaacagcagctgctgacgatctggtat
gaaaacctgtctggactacgggagcaggccacagctatcaaatgccttgttgtgctggtt
gttgccttaggccttccattccttgctgttggctactggtttgctccatgcagcaggctt
gggaaaatcctccgaagtcccttcatgaagtttgtggcgcatgctgcgtccttcatcata
ttcctgggcttgctggtgtttaatgcctcagacagatttgaaggcataacaacattaccc
aacgtcacagtcacagattatcctgcacagatattccgagtgaaaaccacaaggtttagc
tggacagaaatactcatcatggtctgggttgtagggatgatgtggtcggagtgtaaggag
ctgtggatggaaggcccgaaggaatacattttgcagttgtggaacgtgctggattttgga
atgctctccatatttatcgctgcattcacagcaagatttcttgccttccttcaggccaca
aaagctcagcagtttgtagatgaacaccatttcagtgacctgtctacagtaacacttcca
ccagatatagaatactttacctacgcgagagacaaatggctcccctcagatccacagctc
atatctgaaggtctctatgcaattgcggtggttctgagtttctccaggattgcttacatt
ctgcctgcaaatgagagctttggcccattgcaaatctcccttggcaggacggtcaaggac
attttcaagtttatggtcctgtttatcatggtattcctggcctttatgattgggatgttt
attctctattcatactacctgggtgctaaagtgaacccagcttttaccacagttgaagaa
agttttaaaactttgttttggtctatatttggtctgtctgaagtatcgtcagtcgtgctc
aaatatgaccacaaattcattgagaacattggctacgttttatatggaatatacaatgtg
acaatggtggtggtgcttctcaacatgctgattgccatgatcaacagctcataccaggaa
atagagaatgatgcagatgtggaatggaaatttgctcgttcaaagctctggctgtcgtac
tttgatgatggaaaaactttaccccctccatacagtattgtgcccagccccaaatccttc
ttttactgcatcatgcgagtggtgaaccttttcagatgcagaaggagaaggatgaagaag
gatgtagaactgggaatggacatatccaagtccaggttgaacctgttcactcagtcgaac
ctgaaaatctcagagacacacactttcaactccatactcaaccaacccactcgctatcag
aaaataatgaagtgtcttataaaacgttttgtgttaaaagcacaagttgacaaagagaat
gacgaagtcaatgagggtgaactaaaagaaatcaaacaggacatctccagtctccgctat
gaacttctggaagacaagtcccaagcgactgaggagctgtctgttctgatacaaaagctt
agtgataagcttaacattagcatgacaagatgtgaatga
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