Acipenser ruthenus (sterlet): 117410328
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Entry
117410328 CDS
T07327
Name
(RefSeq) TNF receptor-associated factor 3-like isoform X2
KO
K03174
TNF receptor-associated factor 3
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04620
Toll-like receptor signaling pathway
arut04621
NOD-like receptor signaling pathway
arut04622
RIG-I-like receptor signaling pathway
arut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117410328
04621 NOD-like receptor signaling pathway
117410328
04622 RIG-I-like receptor signaling pathway
117410328
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117410328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
Sina_ZnF
ATG16
CCDC22_CC
MscS_porin
CALCOCO1
zf-TRAF_2
zf-C3HC4
Fez1
AAA_13
DUF1664
CCDC144C
CCDC90-like
DUF724
ATG17_like
MAD
DUF4201
Exonuc_VII_L
BLOC1_2
DUF5082
Motif
Other DBs
NCBI-GeneID:
117410328
NCBI-ProteinID:
XP_033872628
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MQCLQGAGFHAENSQSCRVMSAGRNVDLPLELQTQLQRLNPARPPPASRPGSMRLELSPP
PSSFMPLHRGFKDRFVQPLEPKYCCESCKLALCNPRQTECGHRFCESCIRDLLCLQPPIC
PADGEPLYEDKIFTDVCCRREIMGLKVFCRNEKNGCQEQMTLQLLLEHLQDCPYYEITCP
RAECKDTFLRKDVSDHLETKCKYRDTICTYCKRTVLLADQKKHEESVCPAFPVTCPNKCS
YSSVLRSQLTNHRHECPNAQANCMFSRYGCTFKGLNQDMKEHESRFMSEHLKLMVARNSS
LETKMEDVKTELQERYKVLPSLNTRIIELENRYEEVREKSKEMEQKISNVQKLLGSHSEK
VMEMEMELRLLRQAKDDVETLKSTVESIRSRVAVLEGSGRGGGGAGTHALGPLETQLARH
DDMLSVHEIRLADMDLRFQVLETASYSGTLVWKIRDYKRRKQEAVMGKTLSLYSQPFYTG
YFGYRMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPARKHL
GDAFKPDPNSSSFKRPAGDMNIASGCPLFVAQTVLENGTYIKDDTIFIKVVVDASDLPDP
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtttgcagggggcggggtttcatgctgagaacagtcaatcatgcagagtcatg
tcagctggtaggaatgtggacttgcctctggaactgcagacccagctgcagcggctcaac
ccggcccgccccccccctgcatcgcggccgggctccatgcgcttggaactgagccccccc
ccctcctccttcatgccgctccacagggggttcaaggaccgcttcgtccagccgctggag
cccaagtactgctgcgagtcctgcaaactggccctgtgcaacccccggcagaccgagtgc
gggcaccgcttctgtgagagctgcatccgggacctgctctgcctccaacccccaatctgt
ccagctgatggcgagcctctctatgaggacaaaatatttactgatgtgtgctgcaggaga
gagatcatggggctcaaagtgttctgtcggaatgaaaagaacggctgccaagagcagatg
acgctgcagcttcttctagaacatttacaagactgcccgtattacgagatcacgtgtccc
cgggctgaatgtaaagacacatttctacgaaaagacgtgtctgaccacctagaaacaaaa
tgcaaatatagagacacaatatgcacttactgcaagaggacggtgttgttagcagatcag
aagaaacatgaagaatcggtctgtccagcctttcctgttacttgcccaaacaaatgtagc
tatagctctgttttacgaagtcagctaactaaccaccggcatgaatgccctaacgcccaa
gcaaactgtatgttcagtcgctatggatgcacctttaagggattaaaccaagacatgaaa
gagcatgagtcacgcttcatgagcgagcatctcaaactgatggtggcaagaaactccagt
ctagagaccaagatggaggatgtgaagactgaactgcaggaaagatacaaagtccttccc
agtctgaacactcgaatcattgagctagaaaacagatacgaggaagtgcgggaaaaatca
aaggaaatggaacagaagatcagtaacgtacagaagctgctgggctctcactcggagaag
gtgatggagatggagatggagctgcgcttgctcaggcaggcgaaggatgatgtggagact
ctgaagagcacagtggagtcgatccgcagccgtgtggctgtgctggaggggagcggcaga
ggaggaggaggggccgggacacacgcactgggccctctggagacgcagctggcgaggcac
gatgacatgctgagcgttcacgagatccgtctggctgacatggacctgcgcttccaggtg
ctggagacggcgagctacagcgggacgctggtctggaagatcagggactacaagcggagg
aagcaggaggcagtgatggggaagaccctgtcgctgtacagccagcccttctacaccgga
tacttcggctacaggatgtgtgcgcgggtctacctcaacggggacgggatgggcaaaggc
acccatctgtccttgttcttcgtggtgatgcgaggggagtacgatgccttgttgccctgg
ccattcaaacagaaagtcaccctcatgctgatggaccaggggcccgccaggaaacattta
ggggatgccttcaagccagaccccaacagcagcagctttaagcggccggcaggggacatg
aacatcgcttctggttgcccgctgtttgttgcccaaactgtgttagaaaatgggacgtat
atcaaagatgacaccatatttattaaagtggtggttgatgcttcagacctgccagatcca
tga
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