Acipenser ruthenus (sterlet): 117412408
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Entry
117412408 CDS
T07327
Name
(RefSeq) zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117412408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117412408
Transcription factors [BR:
arut03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
117412408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
117412408
NCBI-ProteinID:
XP_034780402
LinkDB
All DBs
Position
10:49050907..49075098
Genome browser
AA seq
1389 aa
AA seq
DB search
MENYLHSVHGSPTLSMISAARGLSPAEVTHEHLKERALFSLPPPPPGATPAEYYHQMALM
ASHRSPYGDLLMQSGAAAAMAAHLPDYINPVDVSRYSSPRLTPRLSRKRALSISPLSDAS
IDLQTMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGGISPAFAFPHPINPMAYQQILNQ
QRGLSSAFGHTPPLIQPSPSFVTRQHMTGISCLPTPAHNNNNSSTSDSNQNASGESAISS
TVNPMITKRSKVKTEGEGVRPASPGTQDHLAGIVGLTEDLDKDECKQEPEVIYETNCHWE
GCTKEYDTQDQLVHHINNEHIHGEKKEFVCRWEECSREQKPFKAQYMLVVHVRRHTGEKP
HKCTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEK
PYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRNEAPHRPQPPRENGANEASTKQ
SGRGLEDSSTTRGIEDCLQVKPIKTENSVMYQSSPAGQSSCSSEPSPLGSTTNNDSGVEM
HMNRGGSLGDLAALDDPPIGDSTVSSGSSTVGLQLRKNMSATHRLEQLKREKLKTVKDSC
SWASPAPQARNTKLPPIPAIGSLLESSSIGGPTAMIPNQRLSELSTSNVIVLNQLNERRD
STTSTISSAYTVSRRSSGISPCYSSRRSSEASQFGGRLNNISSADSYDPISTDMSRRSSE
ASLSGGIPSLLNLTPAQQYRLKAKYAAATGGAPPTPLPNMDRMGLRTRMSLFGDAYESAA
APMHPPTVPRRCSDTGYAVSSMMLQEVPGNINRRASDPVRRPAVDPLSLPRVQRFNSTNS
MNPLPQPMERRNLSLQNYTRSDGSLHRHAFCSRPPSITENVAMETMSGDLDSQAPEDDIM
LPDDVVQYIKTQNRGSVEQDTSSTGYGSQALGFQGNANVPQQHQHQFYGQRRMAMVDTNM
NQPGQIMAQCQMSPGNQQQFHTPPIINKNNMPVQWNEVSSGTVDVIPSQTKQPFARGNLA
VVLQKQNFGQYQNINASQQTMQMNQNNAHIAQQSFTPRNADLNTQRMNYMQQRQQQLNLN
EQMSPQRGYNLNNAMLSPSAASVNTGQLPSCCSIPGSSAPMMTSNSRGPAVQNYSSQSGV
GQNHLAPPNHHEGYCPTQQNFNSPSQPTMMNSSFSHGVMQPGPPPGPGPSNRQREALSSM
QQQQAFIRSPQSIHGTSPSHATSEASPKRPPNMAQSQAQQCTNGSQESSLMFYSGQIHMY
EHNGNLDTGISCARQQQVAQQCSSDIKAPSMPSPGVNQVSSTVDSQGMEHAQIDFDAMMD
DGDQSSLMSGTLSPSILQNLSQSSSRLTTPRSSLTLPSMPAGITNMAIGDMSSMLTALAE
ESKFLNLLS
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggagaactacctccactctgtgcacggcagccccacactctccatgatctcagcagcc
cgaggcctgagcccagcggaggttacgcatgaacacctgaaggagagagcgcttttcagc
ctgccccctcccccccctggagctacccctgctgagtactaccaccaaatggcactgatg
gccagccaccgcagcccctatggggacctcctgatgcagagcggggctgcggcagcgatg
gctgcacacctcccagactacatcaaccccgtggatgtatcgcggtactccagcccacgg
ctgactccgaggctcagtcgaaagcgagccctttccatctcgcccctctccgatgccagc
attgacctccagaccatgatccgcacctcgcccaactccctggtggcctatatcaacaac
tccaggagcagctctgcagccagcggctcgtacgggcatctctctgctggtggaatcagc
cctgcgtttgcttttcctcaccccatcaatcccatggcgtaccagcagattctgaaccag
cagagaggcttgagctccgcgttcgggcacaccccgcctctcatccagccgtctccctcg
tttgtaacgcgacagcacatgacgggaatctcctgccttccaacccctgcacacaacaac
aacaacagcagcacttccgactcaaaccagaacgccagtggcgagtcagccatcagcagc
accgtgaacccgatgataaccaagcgatccaaggtgaagacagagggggaaggagtgagg
ccagcctcccctggtactcaggatcatctggctggaatcgtgggtctcacagaagattta
gataaggacgagtgtaaacaggagccggaagttatatatgagacaaactgccactgggag
ggctgcaccaaggagtatgatactcaggaccagcttgtgcatcacattaataacgagcac
atccatggggagaagaaggagtttgtgtgccgctgggaggagtgctcccgggagcagaag
cccttcaaggcgcagtacatgctggtggtgcacgtgaggagacacacaggggagaaacca
cacaagtgcacatttgagggctgttccaaagcctactcccgactggagaatttaaagact
cacctgagatctcacactggagagaagccgtatgtctgtgaacacgagggctgcaataaa
gcgttctctaacgcctcggacagagccaagcaccagaacaggacccactccaatgagaaa
ccctatgtgtgtaagatcccaggctgcacaaagaggtacacagaccccagctccctgagg
aagcatgtaaagaccgtacatgggcctgaagctcacgtcacaaagaaacagagaaacgaa
gccccccaccggcctcagccgccaagagagaacggagcaaacgaggccagcaccaaacag
agtggcaggggcttggaggatagcagcacaactagaggcatagaggactgcttacaagtc
aaacccattaaaacagagaactctgtgatgtatcagtccagccctgctggtcagtcgtca
tgcagcagtgagccgtccccgcttggcagcaccaccaacaatgacagtggagtagagatg
cacatgaaccgtggaggtagtctgggagacctggctgcactggacgacccccccatcggg
gactccactgtttcctctgggtcctcaacagtcggccttcagctgcgcaaaaacatgtcc
gccacccacagacttgaacaactcaagagggagaaactaaagacggtgaaggattcttgt
tcctgggccagcccagcacctcaagccagaaacaccaagctgcctcccataccagcgatc
ggttctttactggagagttcaagtattggtggacccacggctatgatacctaaccagaga
ctgagtgaactgtccaccagtaacgtcattgtgctcaatcagctgaacgaacgcagagac
agcaccacgagtaccatcagttctgcctacaccgtcagtcggagatcttcaggcatctca
ccctgctattccagccgccgttccagtgaggcctcccagttcgggggtcgtctgaacaac
atcagctcagcagactcctacgatccaatctccacagatatgtctcggcgatcaagtgag
gcgagtctgagtgggggaataccaagcctcctgaatctcacccctgcccagcagtacagg
ctaaaggctaaatatgccgctgcaactgggggagctccacccacacctctacccaacatg
gaccgcatgggtctccggacaaggatgtctctgtttggggatgcatacgagtctgcagcc
gctcccatgcatccccctactgtgccacgacgatgcagtgacactggctacgctgtgtcc
agtatgatgctgcaggaagtgccgggcaacatcaacagacgtgcaagtgaccctgtacgg
aggccagctgttgatcctctgtctctcccaagggttcaacgctttaatagtacaaacagc
atgaacccgctcccccagccaatggagagacgcaacctcagtctgcagaactacacccgc
tcagatggcagcctgcaccggcatgctttctgctcccggccgccaagcatcactgagaac
gttgctatggagacgatgtctggtgacttggacagtcaggctccagaggatgacatcatg
cttccggatgacgtagtgcagtacattaaaactcagaacagaggatctgtggagcaggac
accagctccacaggctacggcagccaggcgctgggcttccaaggaaacgcgaatgtgccg
cagcagcatcagcatcagttttacggccagcggagaatggccatggttgacacaaacatg
aatcagccaggacaaataatggcgcagtgccaaatgagcccagggaaccagcaacagttc
cacactcctccgattatcaataaaaataacatgcccgtccagtggaacgaagtcagctca
ggtactgttgatgtcataccaagtcagacaaagcagccgtttgccagagggaacttagcg
gttgtgctgcagaagcaaaactttggtcagtatcagaacattaatgccagccaacaaacc
atgcaaatgaatcaaaataatgcacacatagcacagcagagtttcacgccaaggaacgca
gacttaaatacccaaaggatgaactacatgcagcaaaggcagcagcagcttaacttaaat
gagcaaatgagcccgcagcgggggtataacctgaacaatgcaatgctcagtccgagtgct
gcaagtgtaaacacaggccagctgccatcatgctgcagtataccaggcagctctgcaccc
atgatgaccagtaacagcagaggacccgcagtgcagaattacagctctcagtctggggtg
ggtcaaaaccacctcgccccccctaatcatcacgaaggttactgtcccacccagcagaat
ttcaacagtccctcccaacccaccatgatgaactcaagtttcagccacggcgtgatgcaa
cctggtccacctccaggacccggcccatccaacaggcagcgtgaggctctgagctccatg
cagcagcagcaggcttttataagaagtccacagtccatccatggcacgagtcccagccac
gccacttcagaagcaagccccaaaaggccgcctaacatggctcagtcccaggcccagcag
tgcactaatggcagccaggaaagcagcctgatgttttattcaggacagattcacatgtat
gagcacaatggaaacctcgacacagggatttcctgtgcaaggcagcagcaggtggcgcag
cagtgttcctctgatataaaggctcccagcatgccttccccaggagtcaaccaggtttca
agcacagtcgactcccagggcatggagcatgctcagatagactttgatgccatgatggat
gacggagatcaatccagcttgatgtcaggaaccctcagccccagcatcctccagaacctc
tcccagagctcctcccggctcacaactcctcgcagctctctgacgctgccttccatgcct
gctgggataaccaacatggctatcggggacatgagctccatgttgacagcgctggctgag
gaaagcaaatttcttaacctgttgtcttaa
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integrated database retrieval system