KEGG   Acipenser ruthenus (sterlet): 117413027
Entry
117413027         CDS       T07327                                 
Name
(RefSeq) AF4/FMR2 family member 4-like isoform X1
  KO
K15185  AF4/FMR2 family member 4
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117413027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:arut03021]
    117413027
Transcription machinery [BR:arut03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     117413027
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int Peptidase_S64 Mst1_SARAH
Other DBs
NCBI-GeneID: 117413027
NCBI-ProteinID: XP_034764362
LinkDB
Position
29:4970348..4997552
AA seq 1152 aa
MASQAGNMNREDRNVLRLKERERRNQETQQGGEANPANSPLFAEPYKVSSKEDKLSSRIQ
SMLGNYDEMKDLIGDKSLQKLVGIPKSAVPSNPEEKSFGEQRSSQSSKWTPVGPAPSTSS
SQSQKRSNLQSSHSSGQRTTSSSSQRHERDYSGSSQKKSKHGSEHSKSRTSSPAKGSLSS
SHSRSHGSDHQGKERHRSKSPRDHDSPSRVHTFSSSGQHSSQAFPPSLMSKPSSMLQKPT
AYVRPMDGQESLEPKTSSENYSSQSHRSSMGEMKSSSKASLAKLKIPSQPLEASMSGDAS
CVDEILKEMTQSWPPPLTAIHTPCKTEPSKFPFPTKDNQQASFGSGGQKRYVTSKMTSSG
HQSKVPDGDQANMLEDDLKLSSSEDSDGEQESAKTAPRNPSASTSEPSQHNSEGAEHDSS
SHSGSESSSGSDSESESSSSDSEANEPTRIPSPEVGFKPEPPPTNKWQLDNWLKQNKVSP
ASSVDSNVPVNYKNENREQSSGRGYAGQGGSKESSSSAPGRDSRTSQKGSESGRSRQKSP
AQSESSNTPRRTVGKKQPKKSEKTPVVEEPKGGLKVESETPPEINRPKAPTKGSRKPNVK
KEPKSSSPRPAMEKRKSKTPNKPSQKSREFIETDSSSSDSEENESIPSSSQTPKYSESVR
TPASKPCIEEEDSFFRQRIFSPMEEKELLSPLSDPDDRYPVIQSLVVKIDLTLLTRIPGR
PYNEIQQPKVEIDSMVEREIKELQKQPNEKSKSKRKHKTEDDSIKSESKKPKLEDKNTSN
HKSSTKESSKRVSEKEKEHAPSPSVTMPLKTPKADHQSRKRTVSQSSTSISSSTSSNKES
GRSSSKSSSSSSKHRKTEEKQTGSAKESKDKAQKSSENNPHHPASSLENSKPRKSKLTFE
DRIHSADHYLQDAKKLKHNADALMDRFEKAVYYLDAVVSFIECGNALEKSAQEAKSPFPM
YAETVELIKYTMKLKSYMAPDATSADKRLAILCLRCQSLLYLRLFKLRKESALKYSKTLT
EHLKNSYSNSQAPSPGMSKAGMPSPVSPKLSPGSSGSYSSGSSNSSGGSSLVTIPQRIHQ
MAASYVQVTSNFLYATEVWDQAEQLSKEQKDFFTELDKVMPPLIFNTSTMTELVRYTRQG
LHWLRLDAKLLP
NT seq 3459 nt   +upstreamnt  +downstreamnt
atggcctcacaggctggcaacatgaaccgtgaagaccggaatgtgcttcgtttgaaagaa
agggaaaggcgaaatcaagaaacccaacagggcggagaggccaatccagctaactcccct
ctctttgctgaaccttataaagtttctagcaaagaagataaactatccagccgcatccag
agtatgctcggtaattacgacgaaatgaaggacctgatcggagacaaatctcttcaaaag
cttgttggaatccccaaatctgctgtaccctctaacccagaggagaaatcttttggggaa
caacgctcgagtcagagcagcaaatggactccagtaggacctgcaccaagcacctcatct
tcccagtcacagaaacgatccaatttacagagtagccacagtagtggccagcggactacc
agcagcagtagccaaagacacgaacgggactatagtggtagtagccaaaagaaaagcaaa
catggctcagagcactctaaatctcgtacatccagccctgccaagggatctttaagttct
agccattccaggtcacacgggagtgaccaccagggtaaagagcgccataggtccaagtcc
ccgcgtgaccacgactctccttctcgtgttcacacattttcatccagcgggcagcactcg
agccaggcttttcctccgtcgttgatgtccaagcccagctccatgctgcaaaagcctact
gcctatgtccgcccaatggatggccaggagtcgcttgaacccaagacgtcatctgaaaat
tacagcagccagtcacacaggagcagtatgggagagatgaagtccagtagcaaagcatct
cttgctaaactcaagatcccttcccaaccattggaggcatcaatgtctggtgatgccagt
tgtgtggatgaaattttaaaggaaatgactcagtcatggccgcctcctttgacagcaatt
catacgccatgtaaaacggagccttcaaagtttccattcccaaccaaggataatcagcaa
gctagttttggcagtggtggtcagaagagatatgtcacatccaaaatgacttcaagtggc
catcagtcaaaagtgcctgatggtgatcaagcaaatatgctggaagatgaccttaaactc
agcagcagtgaagatagtgatggggaacaggagtctgcaaagactgcacctagaaatcct
tcagcaagtacttcagagccttctcaacacaacagtgaaggagcagagcatgattcgagc
agccacagtggctcagagagcagctctgggtccgattctgaaagtgagagcagctccagt
gacagtgaagccaatgagccaacacggatcccatcccctgaggtggggtttaaacctgaa
ccaccacctacaaacaagtggcaacttgacaactggctgaaacaaaataaggtctcacca
gcctcttctgtggatagtaacgtcccagtgaattacaagaacgagaaccgggagcagagc
tcaggcagggggtatgcaggccagggtggatccaaagagtctagctcttctgctcccggc
agagactcacggacttcccagaaagggtcagaaagtggccgcagccggcagaaatcccca
gctcagagcgagagcagcaacaccccgcgacggactgtgggtaaaaaacagcctaaaaaa
tctgagaagacgcctgtggttgaggagcccaagggaggactgaaagtcgaaagcgaaacc
cctcctgaaataaaccggcccaaagctccaacaaaaggttcacgaaagcccaatgttaag
aaagagcccaaatcatcatcgccccggcccgcaatggaaaagcggaaaagcaagactcct
aacaagccttcacagaaatccagggaatttatagaaactgactcttcatcctctgattca
gaggaaaacgagagcattccttcctcctcacagactcctaagtactctgagagcgtcagg
actcctgctagtaaaccttgcattgaggaggaagacagcttttttagacaaagaatcttc
tctcctatggaagagaaggaactactttcgcccctgagcgacccagatgaccggtaccct
gttatacagtctctggttgttaaaatagacttaactctgctgaccagaatccctgggaga
ccttacaatgaaattcagcagcccaaggtagaaattgatagcatggtagagagggaaatt
aaagaattacagaagcaacccaatgagaagagtaaaagtaaaagaaaacacaagacggag
gatgacagcatcaaaagtgaaagcaagaagcctaaactggaagataaaaacacttcgaac
cacaaatctagcactaaagagtcatccaaaagggtttctgaaaaggagaaagaacatgct
ccctctccgtctgtgactatgccactgaaaacccccaaagcagaccaccagtctcgcaag
aggacagtcagccagtcgtccacctccatctccagcagcaccagcagtaacaaggagagt
ggccggagcagcagcaagagcagctcctcatcctccaagcacaggaagacagaagagaaa
cagacagggagtgccaaggagagcaaggacaaagctcagaaaagctctgaaaacaaccct
catcatcctgcatcgtcattagaaaactctaagcctagaaaatcaaaactcacatttgaa
gacagaatacattctgccgatcattatttgcaagatgccaagaagctgaagcacaatgca
gatgcactgatggacaggtttgaaaaggctgtgtattacctggatgctgttgtatctttc
attgaatgtggaaacgctttggagaaaagtgctcaggaagcaaagtctccatttcctatg
tatgcagaaactgtggaactgatcaaatacactatgaagttaaagagctacatggccccc
gatgctacatcggctgacaagaggctcgcgatactatgtctcagatgccaatcgcttctc
tatctgaggctgtttaaactgaggaaagaaagcgcactgaaatattccaaaacgctaact
gaacacttgaagaattcctacagtaattctcaagctccttcacctggaatgagcaaagca
ggaatgccttccccagtatcgcccaagctatccccaggcagttctggtagctactcttca
gggagttcaaactcttcaggaggcagttctttagtcactatcccacagagaatccaccaa
atggcagccagttatgtccaggttacatccaacttcctttatgccacagaagtatgggac
caagctgaacaactatctaaagaacaaaaagattttttcacggagctggataaagttatg
ccccctttgatcttcaataccagcactatgacggagttggtgcgctacacgcgacaggga
ttacattggcttcgacttgacgcaaagttgttaccgtag

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