Acipenser ruthenus (sterlet): 117413283
Help
Entry
117413283 CDS
T07327
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04010
MAPK signaling pathway
arut04020
Calcium signaling pathway
arut04510
Focal adhesion
arut04540
Gap junction
arut04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117413283 (pdgfrb)
04020 Calcium signaling pathway
117413283 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117413283 (pdgfrb)
04540 Gap junction
117413283 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117413283 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
arut01001
]
117413283 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
arut04090
]
117413283 (pdgfrb)
Enzymes [BR:
arut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117413283 (pdgfrb)
Protein kinases [BR:
arut01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
117413283 (pdgfrb)
CD molecules [BR:
arut04090
]
Proteins
117413283 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
VEGFR-1-like_Ig-like
Ig_4
Ig_5
RIFIN
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
117413283
NCBI-ProteinID:
XP_033878122
LinkDB
All DBs
Position
15:complement(28531938..28827327)
Genome browser
AA seq
1070 aa
AA seq
DB search
MKKDWKKSTFSTAILLTAILQFCTGARRPVISPEDSEHVLDLSSTFTLTCSGSDKVVWKY
RQDASVTEVQGELSSNLTLHRVSGRHTGLYTCQHKSAEEQEKSTYIFVPDPDMWFLPLEH
GESVVMKTNAKATFPCFVTNPAFNVTLHDKSHDLPVPGSYKPQEGFTGKVEDKSYYCRAT
FNGTQRESEQFYVYSIIVPEAIEAIINATQAVLKQGEPLMVNCSIHGSELAYFSWDYPRK
AAGKTIEQITDVTAGLEWSLRSILNISNATLEDSGLYYCNVTENVGEQEAYDHINITVLE
KGFVRLSSDLNRNLSVKLHESFDVSVVIEAYPKPSVHWLKDNSIVMESSDEVSMETTEEE
ETRYLSTLTLVRIKTEQSGFYTIRVSNEDEIQELTFDLNVNVPPRIVELSDHHPSDKGQA
VVCVAEGAPSPEIEWFSCSQMKKCSNRTVLWNPLATDPDNISIQTNVSFNESRKVYLARS
VIVFQNVPTMLSIRCEARNKLGRKTQDVKLVSHLLNSQVAITAAIVALLVIAVIAVVVLI
ILWRKKPRYEIRWKVIESVSSDGHEYIYVDPMHLPYDSSWEFPRDCLVLGRTLGSGAFGR
VVEASAHGLSHSQSTTKVAVKMLKSTAKRSETQALMSELKIMSHLGPHLNIVNLLGACTK
RGPIFLITEYCRHGDLVDYLHRNKHTFLQYYADKTRRDSDMCGNTTSEGQGKSYVTLFSE
SDGGYMDMSKDDTTEYVPMLELSDNIKYADIEPSVYETPYQQDNYQGQAPERVDNALVIN
ESPILSYTDLVGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMH
DSNYISKGSTFLPLKWMAPESIFHNLYTTLSDSWSFGILLWEIFTMGGTPYPDLPMNELF
YNALKTGYRMSKPAHASDEIYEIMQKCWNEKYEKRPEFSELVHAVGNLLADSYTKRYNQV
NEEFFKSDHPAIVRTKPRMSGNIAAEVRQDTDNEPSPHNEYIIPIPDPRPEEEEEINDMN
TEKKTSLQPTEEQDSGTDSMEMPHAEPEESGPGSGPKLDQSEPEVEDSFL
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggattggaagaaatccaccttctctactgccattcttcttacagcgattcta
cagttctgcacaggggcacgtagaccagtcatttcacctgaggattctgagcatgttctg
gacctttcctctaccttcaccctcacctgctctggatctgacaaggttgtgtggaaatac
aggcaggatgccagtgtgactgaagtgcagggcgagttatctagcaacctcactctgcac
agggtatcggggagacacactgggctgtacacctgccagcacaagagtgcagaagaacaa
gagaaaagcacatacatttttgtgccagatccagacatgtggttcttaccactggagcat
ggcgaatcagtggtgatgaaaacgaacgccaaagccacctttccctgctttgtcaccaac
cccgcttttaatgtcacccttcatgataagtcacatgacctgcctgttcctggatcgtac
aagccacaggaaggctttacagggaaagtcgaagacaagtcctattactgcagggcaacc
ttcaatggaacccagagagagtcagagcagttttatgtttacagcataatagttccagag
gcgattgaagccattatcaacgccacacaggcggtactgaagcaaggagagcctcttatg
gttaactgttccattcatggctcggagcttgcttatttcagttgggattacccacgcaaa
gctgcaggcaaaactattgagcaaataacagatgtgacagctggcctggagtggagcctg
cggtctatcctgaacatttccaacgccactctggaagattcaggcctgtattactgcaac
gtcacagagaatgtcggggagcaggaggcttatgatcatatcaatatcacagttcttgag
aaggggtttgtcaggctaagctctgacctcaacaggaatctgtctgtcaaactccacgag
agcttcgatgtcagtgtggtgatagaggcctacccgaagccttcagtgcactggctgaag
gacaatagcatagtaatggagagtagcgacgaagtttccatggaaaccacagaggaagaa
gagaccaggtacctcagcacgttgacactggttcgaattaaaacagaacagagcggtttt
tacacaatcagagtctctaatgaagatgagatccaggagttgaccttcgatcttaatgtc
aatgtgcctcccaggattgtggagctttcagaccaccacccctccgacaagggccaggct
gtggtctgtgtggccgagggggctccctcccctgaaatagagtggttcagctgcagccag
atgaaaaaatgcagcaacagaactgttctctggaaccctctagccacagaccctgataat
atcagcattcagaccaatgtgagcttcaatgagagtcggaaagtttatctggcacggagc
gttatcgtctttcagaatgtgccgacgatgctttccatccgctgtgaagccaggaacaag
cttgggagaaaaacacaagacgtcaaactggtttcacacttgttaaactcccaggtggca
ataacagccgccatcgtagccttgctggttattgctgtaattgcagttgttgtgctcatc
atactgtggagaaagaaacctcgctatgagatccgttggaaggtgatcgagtcagtcagc
tctgacggtcatgagtacatttacgtggaccccatgcacctgccctacgactccagctgg
gaattcccaagagactgcttggtgttgggtcggactttgggttcaggagcctttggacgg
gttgtggaagcatccgctcatggcctcagtcattcccagtcaaccactaaagtggctgtg
aaaatgctcaaatccacagctaagaggagcgagactcaggctctgatgtcagagttgaag
atcatgagccatttgggacctcatcttaacattgttaacctgctgggagcctgcactaaa
cgaggtcctatctttcttataacggagtattgtcgccatggagacctggtagactacctc
cacagaaacaagcacacctttctgcagtactacgctgataaaaccaggagagacagcgat
atgtgtggaaacaccacctctgaaggccaggggaaaagttacgtgacgctgttcagtgag
agtgacggtggatacatggacatgagcaaggatgacaccactgaatatgttcccatgctg
gaactgtcagacaacatcaagtatgcagatattgagccatccgtgtatgaaacaccatac
caacaggacaattaccaagggcaagctccagagagagttgacaatgccctggtgattaac
gagtctccaattctgagctacacagacctggtgggattcagttaccaggtggctaaagga
atggagttcctggcttccaaaaactgtgtacatcgtgacctagcagcgagaaacgtcttg
atttgtgaaggaaagctggtgaagatctgtgacttcgggctcgcacgagacatcatgcac
gattctaactacatctccaaaggcagcacattcctgcccctgaaatggatggcaccagag
agtatcttccacaacctgtacacgacactgagtgactcctggtcttttggcattctgctg
tgggagatcttcactatgggtgggactccttacccagacctccccatgaatgaattgttc
tacaacgctctcaagacagggtacaggatgtcaaagcctgcccacgcctctgatgaaatt
tatgagattatgcagaaatgctggaatgaaaagtatgagaaaaggccagagtttagtgag
ctggttcatgcagttggaaacttgcttgctgacagctacacaaagagatataaccaggtg
aatgaggaattctttaaaagtgaccaccctgcaattgtacgcacaaagccaagaatgtca
gggaacattgctgcagaggtgaggcaggatactgacaatgaaccaagccctcataatgaa
tacatcatccccataccagaccccagaccagaggaagaggaagaaatcaacgatatgaat
actgagaaaaaaacaagcttgcaaccaactgaagaacaggattcaggtactgattccatg
gagatgccacatgcagagccagaggaatcaggcccaggttcaggcccaaagctagatcaa
tctgagccagaagtggaggacagcttcctgtga
DBGET
integrated database retrieval system
