KEGG T07327: 117413907

Acipenser ruthenus (sterlet): 117413907

Entry

117413907         CDS       T07327

Name

(RefSeq) E3 ubiquitin-protein ligase RAD18-like isoform X1

K10627

E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]

Organism

arut Acipenser ruthenus (sterlet)

Brite

KEGG Orthology (KO) [BR:arut00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:arut04121]
    117413907
   03400 DNA repair and recombination proteins [BR:arut03400]
    117413907
Enzymes [BR:arut01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117413907
Ubiquitin system [BR:arut04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117413907
DNA repair and recombination proteins [BR:arut03400]
Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    117413907

SSDB

Motif

Pfam:

zf-C3HC4_2 SAP zf-C3HC4 zf-RING_6 zf-RING_2 zf-C3HC4_3 zf-RING_5 zf-RING_10 zf-rbx1 zf-RING_UBOX CpG_bind_C PDZ_3 RING_XB3-XBAT31 zf-ANAPC11 RNF220

Other DBs

NCBI-GeneID:

117413907

NCBI-ProteinID:

XP_033879249

LinkDB

Position

21:7222621..7248255

AA seq 488 aa
MVFTGNIVLKQVGRINSFIRMAQFFTEPAWPQSLTCLKNIDALLRCTICFDYIDIAMMIQ
QCSHNYCSLCIRKFLSLKSQCPLCNLTVTESDLRNNRVLDDLVKSFRSVRQQFLQIDSES
PPKTPQAPGKVSRANCKGPIRKKVQENTLRNCFLQKANPVSSSKEAESQSSCTDIRPKTL
LEKTIKEEPLEIPTGSASSMSSNPEQPSTSLGVKQFMKVECPACGLGISEQYINKHLDIC
LTKSEKKESLRRTSLSSSVAKRKPMAKVVYDLLSDRDLKKRLKALTLSTQGTRQQLIKRH
QKYVQMYNAQCDSLNPKSAQEIVNEVEKNEKMMAQYDGQSNSVMVFSKNQTEEEIDEIHA
QYRKQHKSEFHHLIEKVRGRWNSGKRKIKEEPIEEGSYEGECSTVLDGKKPYRDVTTPEA
YKPKSESEVSLKDESLLMNEIQAPSSPSLSMISISSSCSDIFNFEVTDEHEDHTNNTLET
KGKKKIQK

NT seq 1467 nt +upstreamnt +downstreamnt
atggttttcactggaaatattgtgttaaagcaagtaggaagaattaacagttttattaga
atggcacagttttttactgaaccggcgtggccccaaagtttgacatgtcttaaaaatata
gatgccctgctgaggtgtactatatgttttgattacatagacattgccatgatgattcaa
cagtgttcacacaactattgttcattatgtataaggaagttcttgtctctcaaaagtcag
tgcccactgtgcaatctgactgtgactgaatcagatttgagaaataacagagtacttgat
gaccttgtgaagagcttccgatctgtaaggcagcagtttttgcagattgattccgaatct
ccaccaaagaccccacaggcacctggcaaagtaagccgggcaaattgtaaaggacccatc
aggaaaaaagtgcaggaaaatacgttacgtaactgctttcttcagaaagcaaacccagta
tcttcttcaaaagaagctgaatcacagtcttcctgtacagacataagacccaagactctt
ttggaaaaaactattaaggaagagcccctggagattcctacaggatctgcatccagtatg
tcttccaaccctgaacaaccttcaacttctttgggagttaaacaatttatgaaagtggaa
tgtccagcatgtggacttggcatttctgagcagtatatcaacaaacatctggacatctgt
ctgacgaagagtgagaaaaaggagagcctgagaaggacctctctttccagctctgttgcc
aaaaggaaacccatggccaaagtggtttatgacctgctgtctgatcgggacctaaagaaa
agactaaaggcgctcaccctttccacacagggaaccaggcagcagctcattaaaaggcat
cagaagtatgtgcaaatgtacaatgctcagtgtgactcattaaaccccaaatcagctcaa
gaaattgtaaacgaagttgaaaagaatgagaagatgatggcacaatatgacggacaatcc
aatagtgtgatggtgttttcaaagaatcaaacagaagaagaaattgatgaaatacatgca
caataccgtaaacagcacaagagcgagtttcatcatctgattgagaaggtgagaggtcgc
tggaattcagggaaaaggaagattaaagaagagccaatagaagaaggatcttatgaagga
gaatgctcaacagtgttagacggtaagaagccatacagagacgtgacgacaccagaggct
tacaaacccaagtctgaatcagaagtttctttgaaagatgaatcactccttatgaatgaa
atccaggcaccctcaagtccttcattatctatgatttcaattagcagctcctgttcagac
attttcaattttgaagttacagatgaacatgaagaccacactaacaatactctggaaaca
aaaggtaaaaaaaagattcagaaatga

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