Acipenser ruthenus (sterlet): 117416074
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Entry
117416074 CDS
T07327
Name
(RefSeq) apoptotic protease-activating factor 1-like isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04115
p53 signaling pathway
arut04210
Apoptosis
arut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117416074
04115 p53 signaling pathway
117416074
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117416074
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
APAF1_C
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
WHD_APAF1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
NB-ARC
Beta-prop_EML
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_WDR41
CARD
Beta-prop_Aladin
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_RIG_2nd
DSE1_N
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
CFAP251_N
Beta-prop_WDR19_1st
RMC1_N
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
WD40_like
Ge1_WD40
Beta-prop_Vps41
Beta-prop_DCAF4
ASA1
WD40_RFWD3
CARD_2
Beta-prop_Nup120_160
PEP5_VPS11_N
PAC11
Beta-prop_SPT8
WDR54
Beta-prop_WDR75_2nd
UCP007778
Beta-prop_ACSF4
Beta-prop_WDR11_2nd
AAA_16
Motif
Other DBs
NCBI-GeneID:
117416074
NCBI-ProteinID:
XP_033883003
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All DBs
Position
7:25051123..25125911
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AA seq
1291 aa
AA seq
DB search
MDERARSCLLSSTSKLEQDIKASYIMDHMVSDGVLNTDEEEKVKACTTRKEKAVALLNLI
LKKDNYAYISFYNALLHEGYGDLASMLQKDLPLISPAAEKSFLDGGTPFVQTILCEGGVP
QRPVVFVCRPELINCIREKLYKLENSFGWVAVFGMAGFGKSVLTAEAVRDEQLIKACFPG
GVHWLSVGQLDKAGLLVKMQSLCYRLDQDSQSSQRSPVSIEEARDRLRFLMVRKYPRSLL
ILDDIWDSGVLKAFDIQCRVLFSTRDRGVTDSVSGKKYEVSVDHGLEDDKALEVLALFVN
KKVSELPVQARSIVQECKGSPLVVSLIGALLREFPDRWQYYLKQLQNKQFKRIRKSSSYD
YDALDQAMSVSIDVLHEDRKEYYKDLSVLEKDVKVPAKVLSILWDLEPEEAEDILQEFVN
KSLLFRDCNKRPYQYYLHDLQLDFLTEQNRYRLKDLHSKMVRLYQNHYKKGHPTVADEEC
MYWFRYLAYHMAHGNLREELYSLMFSLDWVKAKAQMMGPASLINDYVVYKDILDEENSTV
RDNFQEFLSLNGHHLSQKPFPDVVQMGLCQPDSSEVYRQARLKAEQETKKGAFYLEWINK
SSLESLSRLIVRPHKGAVYYACFSHNWQQIASCGSDKTLQVFKSQTGEKLLEVQAHDDDV
LCCAFSPDDKLIATCSADKKIKVWNSQNGNLLRTYDEHSEQVNHCQFTNTSRKILLATCS
NDNFIKLWNTNRPGSQNTMFGHSGPVNHCCFSPDDQYLASCSSDGTLKLWEVHTANEWKS
IDILDFFPSLTDEPKELEEVVRCSAWSSDGTRIMAAAKNMVFVFDIESATLLSEIKTGRH
STIQSCDFCPSSQLVAIALSHYTVELWDLESNKKVADCSGHLSWVHCVRFSPDGSVLLSS
SDDQTVRLWETKKVHPSSAVSLKRDSDVLFHHNEISVVAPDSRKRLQLRNGKTGEVIYQS
EEQESRIRCCCLSKDPQAAVLAREDGTVKAGVMSPKQVLRNIGWWTLQLLTLQQSLLTAL
GLENGTVKVLEIPSGNTLCTLTGHTKTVLHCQFTPDGQTLITCSEDTTVRVWDWKSLECK
VLKGHSERVKRFRLLDSSRLLSWSFDGTVKVWDIVTGEMIQDYSCHQGAVLSCDVSPNGR
TFSSASADKSAKIWSFDSTSALHILNGHKDCVRSCRFSWDNQCLATGDDNGEIRIWCVLN
GSLLHICARENKDSMESLHGGWVTDLHFSPDSKMLVSTGGYIKWWDVEKGESLQTFYTTG
TNLKGIHVSPDFKTFVTIDNIGVLYILCKVG
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggacgagagggcccgcagctgtttgttgagctcaacttccaaactggagcaagatata
aaggcttcttatatcatggatcacatggttagcgatggagtgctaaacacagatgaggaa
gagaaggttaaagcctgtacaacacgaaaggaaaaagcagttgcattacttaatttaatc
ttgaaaaaagataactatgcctacatatctttctataatgccttactacatgaaggttat
ggagacctggcctccatgttacaaaaggaccttccactcatctcgccagctgcagagaag
agttttttagatggaggaactccatttgttcagacaatcctgtgtgaaggtggtgtgcca
caaagacccgtcgtgtttgtttgccgtccagagctaataaactgtattcgagagaaattg
tataaactggaaaatagctttggctgggtggctgtctttggaatggcaggctttgggaag
tccgtgttgacagctgaggcagtgcgggatgaacaacttataaaagcttgctttcctggg
ggagttcattggctgtctgttgggcagctggataaggcaggtctgttggttaaaatgcag
tctctatgctaccgcttggatcaggactcccagtccagtcagagatcaccagtcagtatt
gaggaagcccgggaccgcctgcggttcctcatggtccgcaaataccccaggtcccttttg
attctggatgatatctgggacagtggggtactaaaggcttttgatattcaatgtagagtt
ctctttagcacccgagacaggggtgtcactgattcagtttcaggtaaaaagtatgaggtt
tctgtggaccatggacttgaggatgacaaagcgttggaagtcttagccctttttgttaac
aagaaagtatccgaattgccagtccaggcacgtagtattgtacaggaatgcaaaggttca
cctcttgtggtctctctaattggagctctgttacgagagtttccagaccgctggcagtac
tatctgaagcaactgcagaataagcagtttaaaagaatccgcaagtcttcatcgtatgat
tatgatgctttagatcaagccatgtcagtcagcatagacgtgctacatgaggatcgcaag
gagtattacaaggatctctctgtccttgagaaggatgtgaaagtgccagctaaggtgctt
tctattctgtgggatctggagcctgaggaagctgaagacatactgcaagaatttgttaat
aaatcacttcttttccgcgattgcaataagaggccctatcagtattatctgcacgacctg
cagctcgactttctgacagagcagaaccgctacaggcttaaggacctgcattccaagatg
gttcgtctgtaccagaatcattataaaaagggccatcccactgtagctgatgaggaatgc
atgtactggttcaggtacctggcatatcacatggcccatggcaatcttcgtgaggagctc
tactctctgatgttttcactggactgggtaaaagccaaggcacagatgatgggacctgcc
agtctcatcaatgactatgtggtgtataaagacattttagatgaagagaacagcacagtg
cgtgataattttcaggagtttttatccctgaatggtcaccacctgtcacaaaagcctttc
cctgatgttgttcagatgggcctttgccagccagactcctcagaggtgtaccgtcaagca
agactgaaggcagagcaggagaccaaaaaaggagctttttacctggagtggataaacaaa
agcagtttagagagcttgtcccgtctgattgtccgacctcataagggagcagtttactat
gcctgcttttctcacaactggcaacaaatagcttcctgtggatcagataagactttacag
gtttttaaaagccagactggagagaaacttcttgaagttcaagctcatgatgatgacgtg
ctatgctgtgcattctctccagacgacaagttaatagccacatgttcagctgacaagaaa
ataaaggtctggaattcacaaaatggaaatttgcttcgaacatacgatgaacattctgaa
caggtgaatcactgccagtttaccaatacaagtcgcaaaatcttgctggcaacgtgctca
aatgacaactttatcaaactgtggaacaccaatagaccaggatctcaaaacacaatgttt
gggcacagtggtcctgttaaccattgctgtttttcacctgatgaccaatacctggccagc
tgttcaagcgatgggactctaaagctttgggaagtacatacagctaatgaatggaagtcg
atcgatatactggatttcttcccaagcctcacagatgagcctaaagaattggaggaagta
gttaggtgcagtgcttggtcatcagatggtacccgaattatggctgctgcaaaaaacatg
gtgtttgtgtttgacatagagagcgctaccttgctgtcagaaattaaaactggtcggcat
agcaccattcagtcctgtgacttctgtcccagcagtcaactggtggctatagctctgtcc
cattacactgtagagttatgggaccttgagtccaataagaaagtggctgattgtagtgga
cacctgagctgggttcactgtgtgaggttctctcctgatggatcagtactgctctcatcc
tccgatgaccagactgtcaggctttgggagaccaagaaagtgcacccatcatctgctgtg
tccttgaagcgtgactctgatgtacttttccaccacaatgaaattagtgtggtagcgcct
gacagcaggaaacgtttgcagctgagaaatggaaagacaggggaagtgatatatcagtct
gaggaacaggagtctcgcattcgctgctgctgtctcagtaaagaccctcaggctgctgtc
ttggcacgagaggatggaactgtaaaggcaggtgtgatgtcccccaagcaggtactaagg
aacattggctggtggacactgcagcttctgacactccagcagagcctcttaacagcacta
ggactagagaatggcacagtaaaggttttggaaattcccagtggtaataccctatgcact
ttaacaggacacacaaaaactgtcttgcattgccagtttacacctgatggacagacactt
ataacctgctccgaagatacaactgttagggtatgggactggaagtctttggaatgcaag
gtgctgaaaggacacagtgaacgggtaaagagattcaggctgctggatagttcaaggctc
ttgtcctggtcctttgatggaactgttaaggtctgggacatcgtcactggtgagatgatc
caggactactcctgccatcaaggggcagttctgtcttgtgatgtgtcacctaacggacgt
acattttcatctgcctctgcagacaaaagtgccaagatctggagttttgactccactagt
gcccttcacattctgaacggccacaaagactgtgttcggagctgccgcttctcctgggat
aaccagtgcctggctactggagatgacaacggagaaataaggatctggtgtgtgttaaat
ggttctctgcttcatatttgtgcaagagaaaataaagattctatggagtccctgcatggt
ggctgggtaacagatctacatttctcccctgacagtaagatgctcgtttctactggaggt
tatattaagtggtgggacgtggagaagggggaatctctgcaaacgttttataccactgga
acaaatctaaagggaatccatgtatcccctgacttcaagacttttgtaaccattgacaac
atcggggttctgtacatcttatgtaaggtggggtaa
DBGET
integrated database retrieval system
