Acipenser ruthenus (sterlet): 117419459
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Entry
117419459 CDS
T07327
Name
(RefSeq) apoptotic protease-activating factor 1-like isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04115
p53 signaling pathway
arut04210
Apoptosis
arut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117419459
04115 p53 signaling pathway
117419459
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117419459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
APAF1_C
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WHD_APAF1
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
NB-ARC
Beta-prop_EML
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
CARD
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
RMC1_N
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Ge1_WD40
WD40_like
Beta-prop_VPS8
Beta-prop_DCAF4
PEP5_VPS11_N
CARD_2
Beta-prop_Vps41
Beta-prop_Nup120_160
Tricorn_2nd
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR75_2nd
WDR54
AAA_16
Beta-prop_ACSF4
Utp8_b_propeller
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
117419459
NCBI-ProteinID:
XP_033888103
LinkDB
All DBs
Position
14:complement(13122919..13197378)
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AA seq
1291 aa
AA seq
DB search
MDERARSCLLSSRSKLEQDIKASYIMDHMVSDGVLNTDEEEKVEACTTRKEKAVALLNLI
LKKDNYAYISFYNALLREGYGDLASMLQQDLPLISPAAEKRFLDGGTPFVQTILCEGGVP
QRPVVFVCRPELINRIREKLYKLENGFGWVAVFGMAGFGKSVLTAEAVRDEQLLKACFPG
GVHWLSVGQLDKAGLLVKMQSLCYRLDQDSQSGQRSPVTIEEARDRLRFLMVRKYPRSLL
ILDDIWDSGVLKAFDIQCRVLFSTRDRSVTDSVSGKKYEVSVDHGLEDDKALEVLALFVN
KKVSALPVQARSIVHECKGSPLVVSLIGALLREFPDRWQYYLRQLQNKQFKRIRKSSSYD
YDALDQAMSVSIDVLHEDRKEYYKDLSVLEKDVKVPAKVLSILWDLEPEEAEDILQEFVN
KSLLFRDCNKRPYQYYLHDLQLDFLTEQNRYRLKDLHSKMVNLYQNHYKKGHPTVADEEC
MYWFRYLAYHMAHGNLHEELYSLMFSLDWVKAKAQMMGPASLINDYVVYKDILDEENSTV
RDHFQEFLSLNGHHLSQKPFPDVVQMGLCQPDSSEVYRQARLKAEQETKKGAFYLEWINK
SSLESLSRLIVRPHKGAVYYACFSHNWQQIASCGSDKTLQVFKSQTGEKLLEVQAHDDDV
LCCAFSPDDKLIATCSADKKIKVWNSQNGNLLRTYDEHSEQVNHCQFTNTSSKILLATCS
NDNFIKLWNTNRPGSQNTMFGHGGPVNHCCFSPDDQYLASCSSDGTLKLWEVHTANEWKS
IDIMDFFPNLTDEPKESEEVVRCSAWSSDGTRIMAAAKNMVFVFDIESATLLSEIKTGRH
STIQSCDFCPSSQLVAIALSHYTVELWDLESNKKVADCSGHLSWVHCVRFSPDGSVLLSS
SDDQTVRLWETKKVHPSSAVSLKRDSDVLFHHNEISVIAPDNRKRLQLRNGKTGEVIYQS
EEQESRIRCCCLSKDPQAAVLAREDGTVKAGVMSPKQVLRSIGWWTLQLLTLQQSLLTAL
GLENGTVKVLEMPSGNALCTLTGHTKTVLHCQFTPDGQTLITCSEDTTVRVWDWKSLECK
VLKGHSERVKRFRLLDSSRLLSWSFDGTVKVWDIVTGEMIQDYFCHQGAVLSCDVSPNGN
TFSSVSADKRAKIWSFDSTSALHILNGHKDCVRSCRFSWDNQCLATGDDNGEIRIWRVFD
GSLLHICARENKDSLESLHGGWVTDLHFSPDSKMLVSTGGYIKWWNVEKGESLQTFYTTG
TNLKGIHVSPDFKTFVTIDNIGVLYILRKVG
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggacgagagggcccgcagctgtttgttgagttcaaggtccaaactggagcaagatata
aaggcttcttatatcatggatcacatggttagcgatggagtgctaaacacagacgaggaa
gagaaggttgaagcctgtacaacacgaaaagaaaaagcagttgcattacttaatttaatc
ttgaaaaaagataactatgcctacatatctttctataatgccttactacgtgaaggttat
ggagacctggcctcaatgttgcaacaggaccttccactcatctcgccagcagcagagaaa
aggtttttagatggaggaactccatttgttcagacaatcctttgtgaaggtggtgtgcca
caaagacccgttgtgtttgtttgccgtccagagctgataaaccgtattcgagagaaattg
tataaactggaaaatggctttggctgggtggctgtctttggaatggcaggctttgggaag
tctgtgttgacagctgaggcagtgcgggatgaacaacttttaaaagcttgctttcctggg
ggagttcattggctgtctgttgggcagctggataaggcaggtctgttggttaaaatgcag
tctctatgctaccgcttggatcaggactcccagtctggtcagagatcaccagtcactatt
gaggaagcccgggaccgcctgcggttcctcatggtccgcaaataccccaggtcccttttg
attctggatgatatctgggacagcggggtactgaaggcttttgatattcaatgtagagtt
ctctttagcacccgagacaggagtgtcactgattcagtttcaggtaaaaagtatgaggtt
tctgtggaccatggtcttgaggacgacaaagcgttggaagtcttagccctttttgtaaac
aagaaagtatctgcattgccagtacaggcacgtagtattgtacatgaatgcaaaggttca
cctcttgtggtctcactaattggagctctgttacgagagtttccagaccgctggcagtac
tatctgaggcaactgcagaataagcagtttaaaagaatccgcaagtcttcatcgtatgat
tatgatgctttagatcaagccatgtcagtcagcatagacgtgctacatgaggatcgcaag
gagtattacaaggatctctctgtccttgagaaggatgtgaaagtgccagctaaggtgctt
tctattctctgggacctggagcctgaggaagctgaagacatactgcaagaatttgttaat
aaatcacttcttttccgcgattgcaataagaggccgtatcagtattatctacacgacctg
cagctcgactttctcacagagcagaaccgctacagacttaaggacctgcattccaagatg
gttaatctgtaccagaatcattataaaaagggtcatcccactgtagctgatgaggaatgc
atgtactggttcaggtacctggcatatcacatggcccatggcaatcttcatgaggagctc
tactctctaatgttttcactggactgggtaaaagccaaggcacagatgatgggacctgcc
agtctcatcaatgactatgtggtgtataaagacattttagatgaagagaacagcacagtg
cgtgatcattttcaggagtttttatccctgaatggtcaccacttgtcacaaaagccgttc
cctgatgttgttcagatgggcctttgccagccagactcctcagaggtgtaccgtcaagca
agactgaaggcagagcaggagacgaaaaaaggagctttttacctggagtggataaacaaa
agcagtttagagagcttgtcccgtctgattgtccgacctcataagggagcagtttactat
gcctgcttttctcacaactggcaacaaatagcttcctgtggatcagataagactttgcag
gttttcaaaagccagactggagagaaacttcttgaagttcaagctcatgatgatgacgtg
ctatgctgtgcattctctccagacgacaagttaatagccacatgttcagctgacaagaaa
ataaaggtgtggaattcacaaaatggaaatttgctcagaacatacgatgaacattctgaa
caggtgaatcactgccagtttaccaatacaagtagcaaaatattgctggcaacgtgctca
aatgacaactttatcaaactgtggaacaccaatagaccaggatctcaaaacacaatgttt
gggcacgggggtcctgttaaccattgctgtttttcacctgatgaccaatacctggccagc
tgttcaagcgatgggactctgaagctttgggaagtacatacagctaatgaatggaagtcg
atcgatataatggatttcttcccaaacctcacagatgaacctaaagaatcggaggaagta
gttaggtgcagtgcttggtcatcagatggtacccgaattatggctgctgcaaaaaacatg
gtgtttgtgtttgacatagagagcgctaccttgctgtcagaaattaaaactggtcggcat
agcaccattcagtcctgtgacttctgtcccagcagtcaactggtagctatagctctgtcc
cattatactgtagagttatgggaccttgagtccaataagaaagtggctgattgtagtgga
cacctgagctgggttcactgtgtgaggttttctcctgatgggtcagtactgctctcatcc
tctgatgaccagactgtcaggctttgggagaccaagaaagtgcacccatcatctgctgtg
tccttgaagcgtgactctgatgtactcttccaccacaatgaaattagtgtgatagcacct
gacaacaggaaacgtttacagctgagaaatggaaagacaggggaagtgatatatcagtct
gaggaacaggagtctcgcattcgctgctgctgtctcagtaaagaccctcaggctgctgtc
ttggcacgagaggatggaactgtaaaggcaggtgtgatgtcccccaagcaggtactaagg
agcattggctggtggacactgcagcttctgacactccagcagagcctcttaacagcacta
ggactagagaatggcacagtgaaggttttggaaatgcccagtggtaatgccctatgcact
ttaacaggacacacaaaaactgtcttgcattgccagttcacacctgatggacagacactt
ataacctgctctgaagatacaactgttagggtatgggactggaagtctttggaatgcaag
gttctgaaaggacacagtgagcgggtaaagagattcaggctgctggacagttcaaggctc
ttgtcctggtcctttgatggaactgttaaggtctgggacatcgtcactggtgagatgatc
caggactacttctgccatcaaggggcggttctgtcttgtgacgtgtcacctaatggaaat
acattttcatctgtctctgcagacaaaagagccaagatctggagttttgattccactagt
gccctccacattctgaatggccacaaagactgtgttcggagctgccgcttctcctgggat
aaccagtgcctggctactggagatgacaacggagaaataaggatctggcgtgtgtttgat
ggttctctgcttcatatttgtgcaagagaaaataaggactctttggagtccctgcatggt
ggttgggtaacagatctacatttctcccctgacagcaagatgctcgtttctactggaggt
tatattaagtggtggaacgtggagaagggggaatctctacaaacgttttataccactgga
acaaatctaaagggaatccatgtatcccctgacttcaagacttttgtaaccattgacaac
attggggttctgtacatcttacgtaaggtggggtga
DBGET
integrated database retrieval system
