Acipenser ruthenus (sterlet): 117419874
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Entry
117419874 CDS
T07327
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04010
MAPK signaling pathway
arut04260
Cardiac muscle contraction
arut04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117419874
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117419874
04261 Adrenergic signaling in cardiomyocytes
117419874
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117419874
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117419874
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
Cache_3-Cache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
117419874
NCBI-ProteinID:
XP_033889078
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Position
14:24285337..24435137
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AA seq
1124 aa
AA seq
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MESYNIAVFLIVLLSSLMNLSSEEFPTPLTVKTWVDKMQEDLVTLARTASGVDQLGAVFL
KNRDSYTVEINNAQQLVESAAWNIEKLLLNRSMALETLATAAENFQMEHQWKNEFGENET
MYYNAKDNLDLQRLMRQHGYPTRQSDSNETGRIKPEFVEDPSFKRRINYNHTAVHIPTDI
YEGSTIVLNELNWTAALEDVFKKNRDEDPTLLWQVFGSATGLARYYPASPWMDSSKTPNK
IDLYDVRRRPWYIQGAASPKDMLILVDVSGSVSGLTLRLIRTSVSEMLETLSDDDYVNVV
SFNNDAKNVSCFTHLVQANVRNKKVLKDAVHEILAKGITDYKKGFSFAFEQLSNFNVSRA
NCNKIIMLFTDGGEERAQEIFEKYNPEKKVRVFTFSVGQHNYDKGPIQWMACANKGHYYE
IPSIGAIRINTQEYLDVLGRPMVLAGKRAKQVQWTNVYLDALELGLVITGTLPVFNKTKE
LKSNEKGAVPRQNQLILGVMAIDVSLEDIKRLTPRFTIGPNGYYFAIDPNGYVLLHPNLQ
PKTIGVGIPKVYTGKRKPVFQNPKFQEPVTLDFLDAELENDVKVEIRRKMIDGEKGEIKI
NTLVKSQDERYIDKAVRTYTWTPVNGTDYGLALVLPSYSAYYIKANIEDTITQARSKKSK
LKVSETLQLDHFEEYGYTSIAPREYCKDLKLSSNKTQFLLEFNDFIDRKSPNHPSCNVTL
VNRLLLDAGFSNELVQYWKKQSPQGVLARFVATDGGITRIYPKSAGEDWTEDAETYEASF
YKRSLDNPFYIFTAPYFNNSEIGVSGFDSGIMVSRAVEITVDGKLLKPAVVGVKINVTTW
MENFTKATMRTDCTSEICDCEKNNKYVDCVILDDGGFLLMSNQDEYISQIGRFFGEIDPS
FMRNLIQVPLYSFNKSYDYQSVCDPERDTKAAAGLRSVFVPTIADILNIGWWASAAAWSI
LQQLFLSLTFPNFLEAADIEEEMAALSKKSCITEQTQYFFSNNMKSFNGVLDCGNCSRIY
HAEKLANTNLVFLIVDSKVTCLACDSKPLIQAEQPSEGPNPCKLAQNPRHRKGPEVCFDN
DDNDEPICTTSRASAMVSTPLFILLQVFMWCKGRMILTVVGSLL
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggaatcttacaacatagccgtctttttgatcgtacttttatcttcgctaatgaatctt
tcttcagaagagtttcctactccactaacggtaaagacgtgggtggataagatgcaggag
gaccttgtcacattggcccgtacagcaagtggagttgatcagctaggcgcggtatttttg
aaaaacagggattcctatacagtggaaattaataatgctcagcagttggtggaaagtgca
gcctggaatatagaaaaactactgctgaacagatcaatggctttggagacccttgcaaca
gcggctgagaatttccagatggaacaccagtggaaaaatgagtttggggaaaatgagaca
atgtactacaatgcaaaagataacttagacttacagaggctcatgagacaacatggatac
cctacacgccagtctgattctaatgagactggacgaatcaagccagaattcgtagaagac
ccttccttcaaacgacgtattaactacaaccacactgccgtccatatccccactgacatc
tatgaaggctccactatagtgttaaacgaactgaactggactgcagcattggaagatgtt
tttaagaagaaccgtgatgaagatcccacgttactgtggcaggtgttcggcagtgcaact
ggtttggcacgatattacccagcctctccatggatggattcttcaaaaacgccgaataag
attgacctgtatgatgttcgccggcggccatggtacattcagggagctgcctcacctaaa
gacatgctgattctggtggatgtgagtggaagtgtttctggcctgacgctcaggttgatc
cggacatcggtgtctgagatgttggaaacactttctgatgacgactatgtgaatgtagtt
tctttcaacaatgatgccaagaatgtcagttgtttcacccatcttgttcaagccaacgtc
cgcaataagaaggtgctgaaagatgctgttcatgaaatcttagcgaagggaatcacagat
tacaaaaagggcttcagctttgcctttgagcagctgtcgaattttaatgtctctcgagcc
aactgcaacaagatcatcatgctgttcactgacggaggggaagagcgagctcaggagatc
tttgagaaatacaacccagaaaagaaggtccgtgtatttacattctctgttggtcaacac
aactatgataaaggcccaattcagtggatggcctgtgccaataaaggacactattatgaa
attccatccattggagccataaggatcaacactcaggagtaccttgatgtcttgggaaga
ccaatggtgttggctggtaagagggccaaacaagtacaatggacaaatgtgtacctggat
gcactggaacttggtcttgttatcacaggaacactgccagtcttcaacaaaaccaaagag
ctcaagtcaaatgagaaaggtgctgttccaagacagaaccagctgattcttggagttatg
gcaatcgacgtgtctcttgaggacattaagaggctcacgcctcgctttacaattggccca
aatggttactattttgcaatcgaccccaatggctatgttttgctccatcctaaccttcaa
ccaaagacgattggtgtaggcatcccaaaggtttatacgggaaaacggaagcctgttttc
cagaatcccaaattccaggagcctgttacattggattttctggatgctgaactggagaat
gatgtcaaagtggagattcgacggaaaatgattgatggagaaaaaggagagattaaaata
aacacactggtgaagtctcaggatgagaggtatattgacaaggcagtcagaacatacacc
tggaccccagtgaatggcacagattacggcctggcattggtattaccgtcctacagtgct
tactatattaaggcaaacattgaagacacaatcacacaggccagatccaaaaagagcaaa
ttgaaggtttccgaaaccctgcaacttgatcattttgaagaatatggttacacatcaatt
gcaccaagggaatactgcaaggacttaaaactgtcaagcaacaaaacccaatttctcttg
gaattcaatgattttattgacaggaagtcacccaatcatccatcttgcaatgttacactt
gttaaccgactcttacttgatgctggcttttcaaatgaattggtgcagtactggaaaaag
caatctccccaaggagttcttgccaggtttgtcgctactgatggtggaattacaagaatt
tacccaaaaagtgctggggaggattggacagaagatgcagagacatatgaagcaagcttt
tacaagaggagcctggataatccattttatatcttcactgcaccatacttcaacaattca
gaaattggtgtgagtgggtttgattctggtataatggtgagcagagcagttgaaattaca
gtggatgggaaactattaaaacctgctgttgttggagtaaagattaatgtcactacctgg
atggagaacttcacaaaagccacaatgaggacagattgcacgagtgagatatgtgactgt
gagaaaaacaacaagtatgtagactgtgtgattctggatgatggtggattcctcttgatg
tctaatcaggatgagtatatctcacagattggcaggttctttggagagattgaccccagt
ttcatgaggaaccttatacaggtgcctctgtattcatttaataagtcttacgattaccag
tctgtgtgtgatccagagagagataccaaggctgcagctggtctacgttctgtctttgtg
cctacaatagcagatattttaaacattggctggtgggcttctgcagctgcatggtcaata
ttgcagcagttatttttaagccttactttcccaaattttctagaagcagctgacattgaa
gaagagatggcagctctgtcaaagaaaagctgtattaccgagcagactcaatatttcttt
tctaataatatgaaatcatttaatggggtcctagactgcggaaactgttccagaatatac
cacgcagaaaagctggcaaacacaaacttagtattcctgattgttgacagcaaagtgacc
tgtctggcctgtgactcaaaaccattgattcaagcagaacagccatccgaaggaccaaac
ccttgtaagttagctcagaaccctaggcataggaaaggacctgaagtctgtttcgacaac
gatgacaatgatgagcctatatgcacaacaagtcgtgcctctgccatggtgtcaactcct
ctcttcattttactgcaagttttcatgtggtgtaaagggaggatgattctgactgtggtg
gggtctctgctttga
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