Acipenser ruthenus (sterlet): 117420887
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Entry
117420887 CDS
T07327
Name
(RefSeq) short transient receptor potential channel 3-like
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117420887
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117420887
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Motif
Other DBs
NCBI-GeneID:
117420887
NCBI-ProteinID:
XP_033890504
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Position
1:complement(27019287..27046085)
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AA seq
913 aa
AA seq
DB search
MSTKGRKYQKRVSFSEEDNDQDWKEENGGLDSHHLRSVKTVRDSSGYYHHTLEGGDNNPK
EKRLTMMREKGRRQAIRGPAFMFNNRSTSLTTEEERFLDAAEYGNIPVVRKMLEESRTLN
VNCVDYMGQSSLQLAVGNEHLEVTELLLKRDNLARIGDALMLAISKGYVRIVEAILNHPA
FVTSKRLTLSPCELQDDDFYSYDEDGTRFSPDITPIILAAHCQKYEVVHMLLMKGARIEK
PHDYFCKCNDCMEKQRIDAFSHSRSRINAYRGLASPAYLSLSSEDPVFTALELSNELAKL
ANIEKEFKDNKKKETVQLNCFSLNDYRKLSMQCKDFVVGVLDLCRDTEEVEAILNGDVDA
EQVQGQHHRASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENISGLREQATAIKCLVVL
VVALGLPFLAAGYWFAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFNASDRFEGITTL
PNVTVTDYPAQIFRVKTTRFSWTEMLIMVWVLGMMWSECKDLWMEGPREYILQLWNVLDF
GMLSIFIAAFTARFFAFLQATKAQQFVDEHHFSDLSTVTLPPDIAYFTYARDKWLPSDPQ
LISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGM
FILYSYYLGAKVNPAFTTVEESFKTLFWSIFGLSEVSSVVLKYDHKFIENIGYVLYGIYN
VTMVVVLLNMLIAMINSSYQEIEDDADVEWKFARSKLWLSYFDDGKTLPPPYSIVPSPKS
FFYCIMRVVNLFRCRRRRLKKDVELGTDNSKSRLNLFTQSNLKISETHSFSSILNQPTRY
QQIIKRLIKRFVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQTTEELCVLIQK
LSDKLNISMTRCE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaaaaggcaggaagtatcagaagagagtgtctttctctgaggaggacaatgat
caggattggaaagaggagaacgggggtttggattcacatcatttgagatcagtgaaaacc
gttagggattcatctggctactaccatcacacgctggaagggggtgataataatcccaaa
gaaaagagactcacgatgatgagagagaagggaagacgacaagctatccgaggcccagcg
ttcatgtttaacaacagaagcaccagcctgacgacagaagaggagaggtttttggatgcc
gcagagtatggaaacattcctgttgtgcgcaagatgcttgaggaatccaggactttaaat
gtcaactgcgtcgactacatgggccaaagcagcctgcagctcgcagtgggaaatgaacat
ctggaagtgacggagctgctcctgaaaagggacaatctggcccgcatcggtgacgctctg
atgcttgctatcagcaagggttatgtacggattgtggaagcgattttgaaccacccggct
tttgttacaagtaaacgcttgactctcagcccctgtgagctgcaggatgatgacttttat
tcctacgatgaagacggcacaaggttctctcctgacatcacccccatcattctagccgcc
cactgccagaagtacgaggtcgtgcacatgctgctcatgaaaggcgctcgcatcgagaaa
ccccatgactatttctgcaagtgcaatgactgcatggaaaagcagaggattgacgctttt
agtcattcccgctcaagaataaatgcctacagaggattagcaagtcctgcttatctgtct
ttgtctagcgaagacccagtcttcacagctttagaacttagcaatgagctggccaagtta
gccaacattgaaaaagaatttaaggacaacaaaaaaaaagagacggtgcagctcaattgc
ttctccctgaatgactatcgcaagctatctatgcaatgtaaggactttgtagtgggtgtt
cttgatttgtgccgagatactgaagaagttgaagccatactgaacggagatgtggacgct
gaacaagtccaagggcaacaccacagggcttcccttagtcgggtcaaactggccatcaag
tacgaagtcaagaagtttgttgcccacccaaactgtcaacagcagttgctgacaatctgg
tatgaaaacatctcaggactcagggagcaggccaccgccatcaaatgcctcgtggtactt
gttgttgccttaggccttccattccttgctgctggctactggtttgctccatgtagcagg
cttgggaaaatcctccgaagtccctttatgaagtttgtggcacatgctgcgtccttcatt
atattcctgggcttgctggtgtttaatgcttctgacagatttgaaggcataacaacatta
ccaaacgtcacagtcacagattatcctgcacagatattccgagtgaaaaccacaaggttt
agctggacagagatgctcatcatggtctgggttctaggtatgatgtggtcagaatgtaag
gatctgtggatggaaggcccgagagaatatattttgcagttgtggaacgttctggatttt
ggaatgctctctatatttatcgctgcattcacagcaagattctttgccttccttcaggcc
acgaaagctcaacaatttgtagatgaacaccatttcagtgacctatctacagtaacactt
ccaccagatattgcatactttacctacgcaagagacaaatggctcccctcagatccacaa
ctcatatctgaaggtctatatgcaattgctgtggttctcagtttctccaggattgcttat
attctgccagcaaatgagagctttggcccactgcagatctcccttggcaggacagtcaag
gacatttttaagtttatggtcttgtttatcatggtattcctagcctttatgattgggatg
tttattctctattcatactaccttggtgctaaagtgaacccagcttttaccacagttgaa
gaaagttttaaaactttgttttggtctatatttggtctgtctgaagtatcttcagtcgtg
ctcaaatatgaccacaaattcattgaaaacattggctacgtattatatggaatatacaat
gtgacaatggtggtggtgcttctcaacatgctgattgctatgatcaacagttcataccaa
gaaattgaggatgatgcagacgtggaatggaaatttgctcgttcaaaactctggctgtcg
tactttgatgatggaaaaacattaccccctccatacagtattgtgcccagccccaaatcc
ttcttttactgcatcatgagagtggtgaaccttttcagatgcagaaggagaagacttaag
aaggatgtagaactgggaacggacaactccaagtccaggttgaacctgttcactcagtcg
aacctgaaaatctcagaaacgcacagtttcagctctatactcaaccaaccaacacggtat
cagcaaataataaaacgtcttataaaacgttttgtgttaaaagcacaagttgacaaagag
aatgacgaagtcaatgagggtgaactgaaagaaatcaaacaggacatctccagtctccgc
tatgaacttctggaagacaagtctcaaacgactgaggagctttgtgttctgatacaaaag
cttagtgataagcttaacattagcatgacaagatgtgaatga
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